Cyprinodon variegatus (sheepshead minnow): 107096016
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Entry
107096016 CDS
T06110
Name
(RefSeq) CLIP-associating protein 1-B-like
KO
K16578
CLIP-associating protein 1/2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107096016
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107096016
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
107096016
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
107096016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Adaptin_N
HEAT_2
Cnd1
TOR1L1_N
HEAT_DAAF5
MOR2-PAG1_C
ParcG
Sec7-like_HUS
TAN
HsdM_N
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
107096016
NCBI-ProteinID:
XP_015247948
LinkDB
All DBs
Position
Unknown
AA seq
1497 aa
AA seq
DB search
MEEDEEEVSSMESLLELLLQKDLGRRLQVGQEISQLVLSQERCPGLDQDQNQNLLDRMVD
VLAGSWVNSSNYKVVLLGMEVLSALVDRLQERFRTQVGTVLPSLMDRLGDSKDQVREQDQ
ALLLKIMDQSANPQYVWERMMGGFKHKNVRTREGLCLCLISTLNVFGSQSLTLNKIVPHI
CNLLGDPTSQVRDAAMSCLVEIYRHVGERVRIDLGKKGLPQSRLNMIFSKFDEVQRSGNM
VLSPLSGESCCRVLIGRGSGVSATPGTGSQSSTNRKSEQLQIRHRKTGNSSRAFILKECQ
LLSSQSQDRGGGGGGRSVCSAGTEPVRQVNRPCFICRHQNIQNRSEPSSCRTESWSDARG
SGPVGPGSSGCASSLTAPHLWLLLLQIYSNREVEEAMTKIRDVLSDDKKDWELRVAALKK
LRSLLLAGATEFDCFPQQLRLLEASFKLSAKDLRSQVVREACITLGHLSSVLGSRFDHAA
EAIMPSLLSLVPNSAKVMATSGVAAIRLILRQTHCPRLIPVISGSCSSKSVAVRRFRLNW
FLWIKNRLVETSLSSSAKAGASRRPAAASSPGSLQRSRSDVDVNAAACARTRMPAVSSTV
PSPFSAASALPPGSYASLGRVRTRRTSSGTGPTVTDSRGRSRGKVVSQSQPGSRSGSPGR
LLSATYGRMVRTSTGGGSSSASCSLSEKNRPRGHRSQGCSRETSPSRSGAARSRIPRPSM
SQGCSRETSRESSRDTSPSRGFSPLVSRPHSRSTGALSSAEGCSDRLSHQARISASVNAM
RILNTGTEVEAAVADALLLGDSRSKRRPVRRRFESPGMYSDDDANSDASSACSERSFSSR
NGGAGPHFLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRMLSRVELKRLCEIFT
RMFADPHSKRVFSMFLETLVDFIVLHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKA
LDVTRESFPFEQQFNILMRFIVDQTQTPNLKVKVAILRYIEALARQMDPADFVNSSETRL
AVSRIITWTTEPKSSDVRKAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHHHLR
SASVAMAAPVQPAGRTPPRHPGRSSPMDSPTNHGLSPSALEFDSENLNSEEIYSSLRGVT
EAIQSFSFRSQEDPAEPPRRDGKRDFMTGVAAFCGDPAEGGRTALDNKTSLLNTPSPRSF
SGPRFREYNPYNYTDSSPDKSPATEDGADPGRDGRRQDCGENKAVNAKGFPAAPAEQLEL
VGELLKELSQGGAGEQGPEDRRGTLLELLKAAREDSLVVWEEHFKSMLLLLLETLGDKDH
SVRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIYP
EQCIKVLCPIVQTTDYPINLAAIKMQTRAIERVSREPLHQLLPDVIPGLLQGYDNTESSV
RKASVFCLVAIYAVIGEELKPYLSQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatgaggaggaggtgagcagcatggagtccctgctggagctgcttctacag
aaggacctgggcaggaggctgcaggtgggtcaggagatcagccagctggtcctcagccag
gagcgctgtcctggactggaccaggaccagaaccagaacctgctggacaggatggtggac
gtcctggccggctcctgggtcaactccagcaactacaaggtggttctgttaggcatggag
gttctgtcagctctggtggaccggctgcaggagaggttcaggacgcaggtgggaacagtc
ctgccgagtctgatggatcgactgggagactccaaggaccaggtccgagagcaggaccag
gcgctgctgctgaagatcatggaccagtcagctaacccacagtatgtgtgggagcgcatg
atgggaggattcaaacacaagaacgtccggaccagagagggactctgcctctgcctcatc
tccaccctcaacgtgttcggctcccagagtctgacgctgaataagatcgttcctcacatc
tgcaacctgcttggagacccaaccagccaggtccgtgacgccgccatgtcctgcctggtg
gagatctaccgccatgttggagagcgagtgaggatcgacctgggaaagaaggggctgcct
cagtcacggctcaacatgatcttcagcaagttcgacgaggtccagaggtccgggaacatg
gttctgtctcctctgtcaggtgagagctgctgcagggttctgattggacgaggttctgga
gtttcagctacgcctggaacaggaagtcagagcagcacaaacaggaagtcagagcagcta
cagataagacacaggaagacaggaaatagcagccgggcttttattttgaaggagtgtcag
ctgctgtcctcccagtcacaggacagaggaggaggaggaggaggacgcagcgtctgctcc
gcggggacagaaccggtccgccaggtaaaccgtccctgtttcatctgccgccatcagaac
attcagaaccggagcgagccgagttcctgcagaaccgagagctggagcgatgccaggggt
tctggtccggttgggcccggttcttctggctgcgcctcatctctgactgctcctcatctc
tggctgctcctcctgcagatctactccaaccgcgaggtagaggaggccatgaccaagatc
agagacgtgctgtcggacgataagaaggactgggagctgagagtcgccgccctgaagaag
ctgcgctccctcctgctggccggagccaccgagttcgactgcttcccgcagcagctgcgt
ctcctggaggcgtccttcaagctgtcggccaaagacctgcgctcgcaggtggtcagggag
gcctgcatcacgctggggcatctgtcctcggtgctgggcagccgcttcgaccacgccgcc
gaggccatcatgccctccctgctcagcctggtgcccaacagtgccaaagtcatggccacg
tccggcgtggccgccatccgcctcatcctcagacaaactcactgtcctcgtctgatcccc
gtcatcagcggcagctgctcctccaagtctgtggccgtcaggagattcaggctgaactgg
tttctgtggattaaaaaccgtttggtggaaacttctctgtcttcctcagccaaagccggc
gcctcccgcagacctgcggccgcctcctctccggggtctctgcagcgatctcgcagcgac
gtggacgtcaacgctgccgcctgcgcccgcaccaggatgcccgccgtctcctccacggtg
ccgtctcccttcagcgccgcctcggcgcttcctccgggatcctacgcctccctgggccga
gtgagaaccaggaggacgagctccggaaccggtccgactgtgacagacagccgtgggcgg
agtcgggggaaagtcgtctctcagtcgcagcccggcagccgctcgggttctccgggccgc
ctgctgagcgccacctacggccggatggtcaggacgtccacggggggcggcagcagcagc
gcctcatgcagtctgagcgagaagaaccgacctcgaggtcaccgcagtcagggctgcagc
cgagagacgagtcccagcagatcaggagccgcccggagccggatccctcggcccagcatg
agtcagggctgcagccgggaaacgagtcgcgagagcagccgcgacaccagcccctccagg
ggtttctcccccctggtgagccgtcctcattcccgttccaccggcgccctgtcctcagca
gagggctgctcagaccggctgtcccatcaggcgcgaatctccgcctccgtcaacgccatg
aggatcctgaacaccggcaccgaggtggaggcggccgtggccgacgctctgctgttagga
gactccaggagtaagcggcggcccgtgaggcggcgcttcgagtcgcccggcatgtactcg
gacgacgacgccaacagcgacgcctccagcgcctgctcggagcgctccttcagctccagg
aacggcggggcggggccccacttcctgcgtcagacggaggacgtggccgaggtgctgaac
cactgcgccagctccaactggtctgagaggaaggagggtctgctgggcctgcagaacctg
ctgaagagccagaggatgctgagccgcgtggagctgaagaggctgtgtgagatcttcacc
aggatgtttgcagacccccacagtaagagagtgttcagcatgttcctggagactctggtg
gacttcatcgtcttgcaccgggacgatctgcaggactggctcttcgtgcttctcacacag
ctgctgaagaagatgggcgcagacttgctgggctcggtccaagccaaggtccagaaggct
ctggatgtcaccagagaatcgttccccttcgagcagcagttcaacatcctgatgcgtttc
atcgtggaccagacccagacccccaacctgaaggtcaaggtggccatcctgcgttacatc
gaggctctggcccggcagatggacccggccgactttgtcaactccagcgagacccgcctg
gcggtctcacgcatcatcacctggaccaccgagcccaagagctccgacgtgcgtaaggcg
gcccaggtggttctgatcgccctgtttgagctcaacaccccggagttcaccatgctgctg
ggagcgctgcccaaaaccttccaggacgggaccaccaagctgctgcaccaccacctgagg
agcgccagcgtcgccatggcggctccggtccagccggcgggtcggacgcctcctcgccac
ccgggccgcagcagccccatggactcccccaccaaccacggcctctcccccagcgccttg
gagttcgacagcgagaacctgaactctgaggagatctacagctcgctgcgcggcgtgacc
gaggccatccagagcttcagcttccgcagccaggaggacccggcggagccgcccaggcgg
gacgggaagcgggacttcatgaccggcgtggcggcgttctgcggcgacccggcagagggc
ggccgaacggctctggacaacaagacgtcgctgctcaacaccccgtcgccacgctccttt
tccgggccacggttccgggagtacaacccgtacaactacacagacagctctccggataaa
tcccccgccacggaggacggcgccgacccggggagagatggccggcggcaggactgcgga
gaaaacaaggcggtgaatgccaaaggtttccctgcggcgcccgccgagcagctggagctg
gtgggggagctgctgaaggagctgtcccagggcggcgccggggagcagggccccgaggac
agacgggggacgctgctggagctgctgaaggcggcgcgcgaggacagcctggtggtgtgg
gaggagcacttcaagagtatgctgctgctgctgctggagacgctgggcgacaaagaccac
tcggtccgcgcgctggccttacgcgtcctcagggagatcctgcggaaccagccggcccgc
ttcaagaactacgccgagctgaccatcatgaagacgctggaggctcacaaggattcccac
aaggaggtggtgcgggcggccgaggaggcggcgtccacgctggccggctccatctacccg
gagcagtgcatcaaggtcctctgtcccatcgtccagaccaccgactaccccatcaacctg
gcggccatcaagatgcagacgcgcgccatcgagcgcgtctccagggagccgctgcaccag
ctgctgccggacgtcatcccgggtctgctgcagggctacgacaacacggagagcagcgtg
aggaaggccagcgtcttctgcctggtggccatctacgccgtcatcggggaggagctcaag
ccttacctgtcccagctgaccggcagcaagatgaagctgctgaacctctacatcaaacgg
gctcagacctccaccagcaacagcagcagctcctcggacatctcctcctactga
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integrated database retrieval system
