Cyprinodon variegatus (sheepshead minnow): 107096048
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Entry
107096048 CDS
T06110
Symbol
arid4a
Name
(RefSeq) AT-rich interactive domain-containing protein 4A
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107096048 (arid4a)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107096048 (arid4a)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
ARID
107096048 (arid4a)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
107096048 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBB1NT
Tudor-knot
MSL3_chromo-like
Tudor_2
CcmH
Motif
Other DBs
NCBI-GeneID:
107096048
NCBI-ProteinID:
XP_015248021
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
CVFQAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRMVKVKVTLKGESTSQVVQDDQVKG
PLRVGSTVEVKTNEGLSSEAVISKLTDASLYTVVFDDGDEKTLRRTSLCLKGERHFAESE
TLDQLPLTNPEHFGTPVIGKKSNRGGRRSSQAVADEENDTSSSEEEEDDKKRLNDELRGQ
ICSIENVEDSDQWFMALVLSPSCNEELVVKKDQCLVRSFCDGKFYTVGRRHAHVVNTMSI
SKSDFSKRKGIKEAQMFLRSREVPDVWKMDMSQILDSSSEDDKDDKDSEAEEEEEDAEDE
KRKRHIKEEPEEEADPEEKENFLQHLYKFMEDRGNLQQGEQSLFYPSALSAEFDPAHLRF
VGFFLLRCFRSEEDEDGDSLAGTKVRVKYGRGKTQKIYEAHIKKTDVDNGEQFYLVHYYG
WNVRYDEWVKADRIIWPAEKGTKKRQRKKVKNKDKEEPEKEEEKPASITPVKPPGLKRGR
PQIRTTPSGRSVSKTPSSEGQSNGRSVRSEVTPSLANGNDTPRRKKRTPGMYESDQASNE
DSGNSSDDSETDNGPEKTEKPSPWRGGSEPQTREPEEEEEEEEPAQPEEQEGETSAPEPA
DVDDMKAEAASPEVAAPPCPSMPQEEADQPEKQQQQGVEPAVEPSGTAVHLEKNKASPVM
RTLPIQDKSRVSPGQEVMLDESLPPERQQAAPSSPSSTAEEESSSPRGKGRRANPRESAP
ETPPTTPQCNASPAPSSLQVTLLTTPPRGMKRQEEPMVVLRCLPSQHLPTKPLSVNSDTD
SATEEEEEEEEAGPKQKSSSPLKRKATDQRTAEKKLCTEDRKEEGPPAPPTVPPLPQPSE
QSGDEGGEAEEQPRPEEKKDNVVEEEKLSPCGSAEMHSGTEAQSPPPAEELDPQIGPEAL
VCHEVDLDDPDEKEKPPSSSDCLLLMMREQNQAPPPLPLAIQPPQPQVRSFLIAAPPTVI
SEEPHPPKDPAEEERGCSRGEQGGDSSPGFEGSTSSSSSLLFLQENKDRGQKRVNDVNSS
LTAKKHKRNQKRTLTPAKADKNGAGHSSDSEDQSRLSSLSKSQKSRCPGLSSPSSHSKDK
HGFPSPQRSYKWTLQLDELDSMSSTERISFLQEKLQEIRKYYMSLKSEVASIDRRRKRLK
KKEREVSNTTASTSSGSSDTGMSPSSASPAQNTVAVECR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
tgtgtgtttcaggcagcagacgagcctgcctacctgacagtggggacagatgtcagcgcc
aagtacagaggagccttctgtgaggccaaaatcaagacggtcaaacgcatggtcaaggtc
aaggtgaccctgaaaggtgaaagcacgtcccaggtggtgcaggacgaccaggtcaaaggg
cctctgagggtgggctccactgtggaggtgaagaccaatgagggtttgagcagcgaagcc
gtcatcagtaagctgacggacgccagcctctacaccgtagtttttgacgacggtgatgag
aaaacccttcgtcggacatccctgtgtctgaagggtgagcgacattttgcagagagtgag
acgctggaccagctgccgctgaccaacccggagcatttcggcaccccggtcatcggcaaa
aaatccaaccgaggaggacggcgttcatcccaggctgtggctgatgaggagaacgacact
tcatccagcgaggaagaggaagatgacaagaagaggctgaacgatgagctgcggggacag
atctgcagcatagagaatgtggaggactctgatcagtggttcatggctctggtgttgtcc
cccagttgtaacgaggagctggtggtgaagaaggaccagtgtctggtcaggtccttctgt
gatggcaaattttacaccgtggggaggagacacgcccacgtcgttaacaccatgagcatt
tccaagtccgatttttccaagaggaaaggtattaaagaagcccagatgtttctaaggagc
cgggaggttccagacgtttggaagatggacatgagtcagattctagactcctctagtgag
gatgacaaagatgacaaggatagcgaggcagaggaggaggaggaagacgctgaagatgag
aagagaaagaggcacataaaagaggagcctgaggaggaggcagaccccgaggagaaggag
aacttcctccagcatctctacaaatttatggaggacagagggaaccttcagcagggagag
cagagccttttttatccctctgctttatcagctgagtttgatcccgcgcatttgagattt
gttgggtttttcttgcttcgctgttttaggagcgaggaggatgaggatggagactcgttg
gccggaacaaaggtcagggtgaagtacggcagaggaaaaactcagaagatctatgaggca
cacatcaagaagacggatgtggacaacggagaacaattctacttggtgcattactacggc
tggaacgttaggtatgatgaatgggtgaaggctgaccgcatcatttggcctgcggagaaa
ggaactaagaagaggcagaggaaaaaggtgaagaacaaagataaggaagaaccagaaaaa
gaagaagagaagcctgcatccataacgcctgtgaagccacccggcttgaagcgaggtcgt
cctcaaatcaggaccaccccctcaggacgcagcgtttccaaaacccccagcagtgagggc
cagtccaatggcaggagcgtgcggtcagaggtcacaccttccctggcaaatggaaacgat
acgcctcgcaggaaaaaaagaacacctggcatgtatgagtctgatcaggcctccaacgaa
gattctgggaactcctcagatgacagcgaaacggacaatggaccggagaagacggagaaa
ccgtctccatggcgagggggatctgagcctcagacccgtgagccagaggaggaggaggag
gaggaggagccggcgcagccggaggagcaggagggggagacgtctgcaccggaacctgct
gatgttgatgacatgaaggccgaagcagcgtctccagaggtcgcagcaccgccgtgtccc
agcatgcctcaggaggaggcggaccaaccagagaagcagcagcagcagggggtggagcct
gcggtggagcccagtgggacagcagtccacctggagaagaataaagcaagtcctgtgatg
cggacgttacccatccaagacaagagcagggtgtcccctggacaggaagtgatgctggac
gagtccctcccacctgagagacagcaggccgcgccctcctcacccagcagcacggctgag
gaagaaagctcctcccccagagggaaaggtcgcagggcaaatcccagagagtccgctcct
gagactccacccacaaccccgcagtgcaacgctagccccgcccccagctccctgcaggtc
acactcctgactactcctccccgggggatgaagagacaagaagaacccatggtggtccta
cgatgcctcccctcccagcacctccccaccaagcccctgtccgttaactcggacacggac
tccgccacagaggaggaggaggaggaagaggaggcggggcctaaacagaagagtagttca
ccactgaaacgtaaagcaacagatcagagaacggcagagaagaagctctgcacggaggac
aggaaggaggaaggcccccccgcgccgcccacagtcccccccctgccccagccgtctgag
caaagcggggatgaagggggggaggcggaggagcagcctcgcccagaggagaagaaggat
aatgtggtggaggaggagaagctgtcgccatgtggatctgcagagatgcattctgggaca
gaggcccaaagcccccccccggccgaagagctggaccctcagatcggtcccgaggctctc
gtctgccacgaggtggacctggacgacccggatgagaaggagaagcccccctcctcgtcg
gactgcctcctcctcatgatgcgggagcagaaccaggctccgccccctctgccactcgcc
attcaacccccccagcctcaggtcagatccttcctcatagctgcccctcccaccgtcatt
tctgaggagccccaccctcccaaggaccctgctgaggaggagcggggctgcagccggggg
gagcaggggggagactccagtcctggctttgaaggaagcacctcctcctcttcctcactg
ctgtttctgcaggagaacaaggacagaggtcagaagagggtgaacgacgtgaactccagc
ctgacggccaagaaacacaaacggaaccagaaacggaccctgacccccgccaaggccgac
aagaacggagcaggtcacagcagcgacagcgaggaccagtctcgtctctcatcgctgtcc
aaatcccagaagtcccgttgtcccggtctgtcctctccgtcctcgcacagtaaagacaaa
catggcttcccctccccacagcgctcctacaagtggacactgcagcttgatgagttggac
agcatgtcgagcacagagaggatctccttcctgcaggagaagctgcaggagatcaggaag
tactacatgagcctgaagtctgaggtggcctccatcgaccggcgcaggaagagactaaaa
aagaaggagagagaagtatccaacaccacggcgtccacctcctcaggctcctcagacaca
ggcatgagtccgtcctcggcctcgccggctcagaacaccgtggcggtggagtgcaggtga
DBGET
integrated database retrieval system
