KEGG   Cyprinodon variegatus (sheepshead minnow): 107096112
Entry
107096112         CDS       T06110                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cvg03009]
    107096112 (rrp9)
Ribosome biogenesis [BR:cvg03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    107096112 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st WDR54 WD40_RFWD3 WD40_like VPS11_N Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 107096112
NCBI-ProteinID: XP_015248103
Ensembl: ENSCVAG00000005772
UniProt: A0A3Q2DSU3
LinkDB
Position
Unknown
AA seq 481 aa
MSSSFFIKSKGNPKATKKGKDTSAVKRKADGDASGKNKIRAKKSSKYNEEISSDSEVESP
ALPKKRQAKEEIEFEETPQEKKLRLAKLYLDQLKEEEERKAEDESFETDHIAGRLQEEVL
EQKGKLQRLIAKDLMPPDVSEIRVLRGHKLPITCLAVTPDDRCIFSAAKDCSIIKWDIES
GKKLHTIHGGRKGTEDRHVGHTAHILCMSLSSDGKYLATGDMNKLIMIWEAETCKHLYKF
TGHKGPVSGLSFRKGTHDLYSASHDRSVKVWNVDENAYVETLFGHQDAITGLDSLSRERC
VTAGGRDGTVRVWKIAEESQLVFHGHEGSIDCVQLINEEHMITGADDGSVSLWSVNKKKP
LSTVKQAHGCHGDAGMEQPHWVASVAALQNSDTVASGSHNSQVNVWKCGQNFRRLELLFS
VPVSGFINSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYIIPLKRKPSNAEEDKHP
E
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtcttcgtcattttttataaagtcgaaagggaatcctaaagcaactaaaaaaggaaaa
gatacttcagcggttaaacggaaggcagatggagacgcgagcgggaagaataaaataaga
gcaaagaagtccagcaaatataatgaagagatttccagtgactcggaggtggagagccct
gcattacccaagaagaggcaggccaaagaggagattgagtttgaggaaactcctcaggag
aagaagctcagattagccaaactataccttgaccaactaaaagaagaagaagaaagaaaa
gctgaagatgagtcgtttgagacggatcacatagctggacgacttcaagaagaagtgctt
gagcagaaaggaaagctccagcgtcttatagccaaagatctcatgccaccagatgtctcg
gagatccgggtgttaagaggtcacaaattaccgattacttgtctggctgtcactcctgat
gacagatgcatcttttcagctgctaaggactgctctattattaaatgggacattgaaagt
gggaagaagctccatacaatacatggtgggagaaaaggtacagaagaccgccatgttgga
cacacggctcacatcctgtgtatgagcctttcatcagatgggaaatatctggcaacagga
gacatgaacaagctgataatgatttgggaggcagaaacatgtaaacatctgtataaattt
acaggacacaaagggcctgtttcgggtctttcattcaggaagggaactcatgatctgtac
agcgcttctcatgaccgctcagtcaaggtctggaacgtagacgagaacgcatacgtggaa
actctcttcggccatcaggatgcaatcacaggactggacagtctgagccgtgaacgctgc
gtcacagcaggtgggcgggacggcacagtgagagtgtggaagatagctgaagagtctcaa
ctggtcttccacggacacgaagggtcaattgactgcgttcagctcataaatgaggagcac
atgataacaggagcagatgatggctcagtttctctttggagtgtcaacaagaagaagccc
ctcagcacggtgaagcaggctcacggctgccatggtgatgcagggatggagcagcctcat
tgggtggcctcagtagcagctcttcagaactcggacactgtagcctcaggttctcacaac
tcacaagtcaatgtatggaaatgtggccagaacttccgccggctggagcttttgtttagt
gtgccagtgtctggtttcatcaacagtctgaagttttcaagctctgggcagttcttggtg
gctggagttggacaggagcacaggttgggacgatggtggagattgaaagaagccaaaaat
gggatctacatcattcctctaaaacgaaaaccatctaatgcagaagaagataaacaccca
gaataa

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