Cyprinodon variegatus (sheepshead minnow): 107096119
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Entry
107096119 CDS
T06110
Name
(RefSeq) protein polybromo-1-like
KO
K11757
protein polybromo-1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107096119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107096119
03036 Chromosome and associated proteins [BR:
cvg03036
]
107096119
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107096119
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
107096119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107096119
NCBI-ProteinID:
XP_015248112
Ensembl:
ENSCVAG00000005966
LinkDB
All DBs
Position
Unknown
AA seq
1639 aa
AA seq
DB search
MSANSKRRRATSPCSSVSGGADPEDSSTPVSNRKRRKISNVAPVDTIAVCHELFNAVKDY
KDGQGRQLCDAFLRVPKRRNQPDYYEVVSQPIDMTKIQYKLKSEEYNDVEQLTADFQLMF
KNARNFYKTDSEEYQAACKLWEVYLQTRNDFVQPGDGDEEDEEGDDMMANSGMSAEYETS
GCNLKEVLEQLLEAIVSHTDPSGHLVSELFQKLPSKVQYPDYYAIIKEPIDLRTIAQRIQ
IGFYKTVTAMAKDIDLMTKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSSIR
IRNRKSGQVDRFSGVSVALQYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPIFQL
YEAVRGARNNQGQVFSEPFQQLPSRREYPDYYQQIKQPISLQQIRAKMKNGEYESVEQID
ADLNLMFENAKRYNMPNSSIYKRAFRLQQIMQAKKRELLRKDEEDGDSILSSDAGSVKRK
SHKKNVKKNRMKVLYAAVSDAREAATNRRLCELFMVKPSKKDYPDYYNVILEPMDLKTIE
HKIKNERYSTEEELIEDMKLMFRNARHYNEEGSQVYNDADVLEKILKDKRKELGPPPEEE
DVGSPKLKLRKSGVSPKKSKYLTPLQQKLNELYDAVRNFTDRRGRRLSTIFLRLPSRSEL
PDYYATIKKPIDMERIRSHMVTGRYQDVEALFEDFALMFNNACIYNEPESLIYRDALVLH
RVLLETRKQQERGDDSGPPAVGPLVRELIRNLFVSVMSHQDEEGRCYSDSLAEISAVDPS
DPEKPALNFDIIRINVERGLYRRLDVFQEHMFEVLEKARRLNSTDSEVFEDSVELQQFFI
KIRDELCKNGEILLSTALNYTLKHLHNDVDQEKREKIPKEIEEDKQKREEEEASKEKRAD
DLQKEAWQPESDSRLVYSQDCSFEDRTYHVGEFVYVEPSEPNLKPHIVCIEQLWEDEMGE
KWLYGCWFYRPSETFHLATRKFLEKEVFKSDYSNRVPISKVLGKCMVVFVKDYFKMQPEG
FKPEDVYVCESRYFARNKLFKKIKVWAMPESSVKLVPREVPLPVVRVASMFAKPDLEKLA
MSYAGAGKFIEKEREDVPMEMSATEPGCQYYEQLHFNKMWFKVGDFVYIQSHGLSKPRVA
RLEKLWVQNGTTFFFGPIFIHPEETEHEPTKMFYKREVFLSHREETLPMSCVIGKCTVSS
FKDYLSNRPTEFSEEDVLLCESRYIEAEKTMKKFKGLKRFSYSSKVVEDEVFYFRKLIVP
QKEASPFLDKKIDELEVKLADMEDGDDDMDDMEEDEDAPATPSMPQMQSSLTSDMDIMNY
TPSQATPKVKGLAKKEGAKRKINMSGYILFSSEVRAIIKARHPDYSFGELSRLVGTEWRN
LEASKKAEYEERAARIVEQQEHDRPFKQGSPRAGTPVGALMGVVPSPSTMGMINQSMTPV
SGMMGAYGPPYMPMQGPHEGLLSVAPMPPHPAGVPNLPPHHLHPGMPGYPGMPHQGMVGA
GMNGMAGSPGQSNFIQQPGMFSPGQHAPPPYPGQGQPSHLQPTTPMFVAPPPKTQRVLHS
EAYLKYIEGLNSESNTVSKWDQMLKAQRRDAHLTKEQESRLPAHWLKSKGAHTTMVDALW
RLRDLMLRDSLNICQAYNL
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactccaagaggagaagagccacctctccctgcagtagtgtcagcggagga
gcagatccggaggattcctcgactcctgtaagcaatcggaaaaggaggaagatttccaac
gttgctcctgttgatacgattgctgtctgtcatgagctgtttaatgctgttaaagactac
aaggatggccaagggcggcaactttgcgatgcttttcttagagtaccaaagagaaggaat
cagcctgattattatgaagttgtgtcccaaccgattgatatgacaaaaatccaatacaaa
ctgaagtcagaggagtacaacgatgttgagcaactaactgctgattttcagctcatgttt
aagaatgccagaaatttctacaagactgacagcgaggagtatcaagcagcgtgcaagctc
tgggaagtgtatttgcaaacaaggaatgattttgtgcagcctggagatggagacgaggaa
gatgaagaaggtgacgacatgatggctaattcaggaatgtcagctgaatatgagacatca
ggttgcaacttgaaagaagtactggagcagctcttggaggctatagtatcacacactgat
ccctcaggccaccttgtcagtgaactattccaaaaacttccctccaaagtgcaataccca
gactactatgctattataaaagagccaatcgatctcagaacgattgctcagagaatacag
attggtttctataaaacagttactgctatggccaaggacattgacctgatgaccaaaaac
gccaaaacgtacaatgaaccaggatctcaggttttcaaggatgcaaacaccataaaaaaa
gttttcatccaacgaaagacagaactcgaacacgccgagcctactaaatctagcattcgc
attagaaaccgaaaatcaggacaagtggatcgtttttctggtgttagcgttgctcttcag
tacggttcagagagtgaggatgaccctgtgctgtcaggctccgtgtgctatgatgaggga
gaatctgaggcagaaagccagagttcaagcatggagatgagcaacccaatctttcagctc
tatgaagctgtgagaggggccagaaacaaccagggacaggtcttctccgaacctttccaa
cagctgccatcccgccgggaatatcctgattactaccagcagataaaacagcccatctcg
ctgcaacaaataagggcaaagatgaagaatggagagtacgaaagcgtagagcagatcgat
gctgacctcaatttgatgtttgagaatgcaaagcgctacaacatgcctaactcaagcata
tataaacgagccttcagactacagcagattatgcaggcaaagaagagggagcttctgaga
aaagatgaggaagatggcgacagcattttgtcatctgatgcagggagcgtcaaaagaaaa
agccacaaaaaaaacgtaaaaaagaaccgaatgaaagtgttgtatgcagccgtgagcgac
gccagggaagcagctaccaacagacgtctgtgtgaacttttcatggtcaaaccgtccaag
aaggactaccctgactattataacgtaatcctcgaaccaatggacctgaaaaccatcgag
cacaagattaaaaatgaacgctacagcactgaggaggaactgatagaggacatgaagttg
atgtttcgtaatgctcgacattacaacgaggagggatctcaggtatataatgatgcagac
gtcctggagaagatactaaaagataaacgaaaggagctgggaccaccacctgaggaggag
gatgtgggatcacctaaattaaaattaagaaaaagtggtgtttctccaaagaagtccaaa
tacctcactcctctgcagcagaagttaaatgagctctacgacgctgtcagaaacttcaca
gaccgcagaggtcgtcgtttaagtaccatttttctccggctgccgtctcgctccgagttg
cccgactactacgcaacaataaaaaaacccatcgatatggagcgcatccgaagccacatg
gtgacaggacgctaccaggatgttgaagctctgtttgaggactttgctctcatgttcaac
aacgcctgtatctataatgagccagagtcgttgatctatagagatgctctggtgttgcac
agagtgttgctggagacgcgaaagcagcaggagcgaggggatgactctggtcctcctgct
gtgggacctctggtgcgagagctgatcaggaatctgtttgtgtcagtaatgagccaccag
gatgaagagggccggtgttacagcgactcgctggctgagatttcagctgtagatccaagc
gaccctgaaaagccagcacttaactttgacatcattaggataaatgtggagcgaggtctt
taccggagactagacgtcttccaggagcacatgtttgaggtgttggagaaagcaagaagg
ctaaacagtactgactctgaggtgtttgaggattctgttgagctgcagcaattctttatt
aagatcagggatgagctatgcaagaatggggagatcttactctctactgccctcaattat
acattaaagcacctacacaacgatgtggatcaggagaagagggaaaagattcctaaagag
atagaggaggataagcagaaaagagaggaagaagaggcaagcaaagagaaaagggcagat
gatttgcagaaagaggcatggcagccagaatcagattcacgacttgtttacagccaggac
tgcagctttgaggacagaacttaccacgttggcgagtttgtttatgtggaaccatcggaa
ccaaacctgaagcctcatattgtctgcatcgaacaattgtgggaggatgaaatgggtgaa
aagtggctgtatggctgctggttttataggcccagtgaaacttttcatttggccacacgc
aagtttctggaaaaggaggtcttcaagagcgactactccaacagagtacccattagtaaa
gttcttggcaaatgtatggtcgtttttgtaaaggattatttcaagatgcaaccagagggc
tttaaaccagaggatgtgtatgtatgcgaatcacgttattttgccagaaacaagttgttc
aagaagatcaaagtttgggccatgccagagagttcagtgaaacttgtacctcgagaggtt
cctcttcctgttgtgcgtgtcgcatcaatgtttgccaaacctgacctggaaaaattggca
atgtcgtatgcgggagcaggcaaatttatagaaaaggagagagaggatgtccctatggag
atgagtgcaacggagccgggctgccagtactatgagcagttacactttaacaaaatgtgg
tttaaagtgggagactttgtttacatccagtcacatggtctgtctaaacctcgggttgca
aggctagaaaagctgtgggtacagaatgggactacattcttctttggacccatttttatt
catcctgaggaaacggagcatgaacctacaaagatgttctacaagagagaagtgtttctg
agtcatcgagaggagacccttcccatgtcctgtgtcataggtaaatgtacagtgtcctcc
tttaaggactacttgtcaaacagacccacagagttttcagaggaagatgtcctgctttgt
gagagccgctacatcgaggcagagaagacgatgaaaaaattcaagggtttgaaacgcttc
tcatactcctccaaagtggtggaggatgaagtcttttattttaggaaactgatagtgcca
caaaaggaagcttcaccctttttggacaagaagatcgatgagcttgaggtgaagctggca
gacatggaggatggagatgatgatatggatgacatggaagaagatgaagacgctcctgcc
accccttctatgcctcagatgcagtcctctcttaccagtgacatggacattatgaattac
acaccatctcaggcaactcctaaagtaaaaggcctggcaaagaaggaaggagccaagaga
aagatcaatatgagtggatatatcctgttcagcagtgaggtgcgagccattattaaagcc
cgtcaccccgattactcttttggggagttgagtcgtcttgttggcacggagtggagaaac
cttgaagcttctaagaaagctgaatatgaagagcgcgccgctagaatagtggagcagcag
gaacatgacagacccttcaagcaaggttcccctagagcaggtaccccagtaggggcactg
atgggggtggtgccttcacctagcactatgggaatgataaaccagtccatgacccctgtg
tcaggcatgatgggagcttacggcccaccttacatgcccatgcagggtccccacgagggt
ttgctgagtgtggccccaatgccacctcaccctgcaggggtgcctaacctgcctcctcac
catctccacccaggcatgccggggtacccgggcatgccacatcagggtatggtgggagct
ggtatgaacggcatggctggaagtcctgggcaaagcaatttcattcaacaacctgggatg
ttcagtccaggacagcatgctcctccaccatatccaggacagggccagccttctcatttg
cagcctacaactccaatgtttgtagcaccaccaccaaaaacacagagggtgctccactca
gaagcctacctgaagtacattgagggattaaattcagaatcgaacactgtcagcaaatgg
gaccaaatgttaaaagctcaaagacgcgatgctcacctgaccaaagagcaggaaagtcgg
cttcctgcgcactggctaaagagcaaaggagctcacacgaccatggtggacgcactgtgg
cgtttgcgtgacctaatgctgagagattctctgaatatctgtcaggcatacaacctataa
DBGET
integrated database retrieval system
