Cyprinodon variegatus (sheepshead minnow): 107096120
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Entry
107096120 CDS
T06110
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107096120 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107096120 (stau1)
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107096120 (stau1)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107096120 (stau1)
mRNA cycle factors
Stress granule specific factors
107096120 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Calpain_inhib
Motif
Other DBs
NCBI-GeneID:
107096120
NCBI-ProteinID:
XP_015248113
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MSQLQFQCPPSAIPAASAPLQMGQPQPSYSIPCATGALPSESASQPIRSSALPAGSATPY
STTTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKIFSVRLTLGDQHWEA
EGTSIKKAQHSAAASALSETTLPKPTVRSPRNTGRNPVDGSTHSMELNALCLKLGKKPMF
KPIDPYPCMRPPNYNYNVRAPGPYQRSMQQYYYPFPPVGPIVYHMELSIGSQQFIGKGRT
RQQAKHDAAVKALKVMQKEPILQQLPVMNGEPEEEENLNKSEISQVFEIALKRNLPVNFE
ILKEEGPPHMKNFVVRVTVGEFFGEGEGKSKKIAKKLAAAAVLIELKRLPLIPGVEKKLP
RIKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQV
TVCSQTAEGLGPSKKVAKRNAAEKMLELLGYKVPQPQPPKPALKSEEKAPVKKSCEGRKV
TFFEPGSTDDVTVCTKEEDFRLPYLSHQQLPAGILPMVPEVAQAVGACQVTQLKDYSRIV
ANPGKATVTATIANELLYAGSSMTAVAILKNKNNLTQMPHGPLTRPSEQLSYLASVQGLQ
VEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDIESCHDMAALNILKLLSELDQQPNER
TGNGPASGCGKQEMEGDLHLKQANSNTLAQTLDSTA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctccaatttcagtgtccgcccagcgccattcctgctgcctctgctccgctg
cagatggggcagccgcagcccagttacagcatcccgtgtgctacaggtgccctaccgtcg
gagagtgcaagccagcccatcaggagctctgctctccccgcgggctcagccaccccctat
agtaccaccacagtatctaacatggcaaaccctaaagagaagacccctatgtgtttggtg
aatgagttagcccgttttaacaagatccaacctgagtacaagcttctttctgagcaagga
ccagctcactccaagatcttctcagtgaggctcactctgggagatcagcactgggaggca
gagggaaccagtatcaagaaagcccagcattcagctgctgcatctgccctctctgagacc
acacttcccaaacccacagttagatcacctcgaaacacaggcaggaacccagtagatggc
agtacacacagtatggagttgaatgcactttgtttgaagcttggtaaaaaacctatgttt
aaacccatcgacccatacccgtgtatgagaccaccaaactacaactacaatgttcgcgct
cctggaccttaccagcgctctatgcaacagtactactatccatttcctccagtgggacca
atagtataccacatggagctctccatcgggagccagcagtttattggaaaggggcgaacg
cggcagcaggccaaacatgacgctgctgtcaaagccttgaaagtgatgcagaaggagcca
atactgcagcagttgccggtgatgaatggagagcctgaggaggaggagaacttgaacaaa
tccgaaataagccaagtgtttgaaatagctctaaaaagaaacctacctgtcaactttgag
attttaaaagaagaagggcctccacatatgaagaattttgtagtgcgtgttacagttggg
gagttctttggagagggggagggcaaaagcaaaaagattgcaaagaagctggcagctgcc
gccgtgctaatagagttaaagaggctccccctcatacccggtgtggagaagaagctgcca
cgcatcaaaaagaaaacaaaatctatcattaagctgcagaccagccctgagtatggccag
gggatgaatcccatcagccgcttggctcagatccagcaggcaaagaaggagaaggagcca
gaatacagcatggtgacagaaagaggtctgccacggcgaagggagttcgtcatgcaggtg
actgtgtgtagccagactgcagagggactggggccgagtaaaaaggtggcaaagaggaac
gcagctgagaaaatgctggaactgttgggatataaagtgcctcagcctcaacctcccaag
ccagcactcaaatctgaagaaaaagcgccagttaaaaagtcttgtgaggggcgcaaagta
accttctttgaaccaggttcaacagacgacgtgacagtgtgtacaaaggaggaggatttc
cgcttgccttacctcagccaccagcagctgcctgcaggtatcctgcccatggtgcctgag
gtggcgcaagcagtcggggcctgccaagtaacccagctgaaggactacagccgaattgtg
gccaacccaggcaaggccacagtcactgccaccattgccaacgagctgctgtacgctggc
tcgtctatgactgctgtggcgattttaaagaacaaaaacaacctgacccagatgccccat
ggacccctcaccagaccctctgaacagcttagctatcttgcatctgtacagggtctgcag
gtggaatacaaggatttccccaaaaacaataagaatgaatttgtatctctgataaactgc
tcctcccagcctccactcatcagtcacggcattggaaaagatatagaatcctgtcatgat
atggctgcactgaatatattgaagttgctgtccgaattagaccagcagccaaacgaaagg
acagggaatggaccagcttcagggtgtggcaagcaagaaatggagggtgacctgcacctc
aaacaggctaactcaaacacattggcacagactctggatagtacggcttag
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