Cyprinodon variegatus (sheepshead minnow): 107096172
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Entry
107096172 CDS
T06110
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein-like
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107096172
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107096172
Cilium and associated proteins [BR:
cvg03037
]
Other cilia and associated proteins
Stereociliary proteins
107096172
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
107096172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
107096172
NCBI-ProteinID:
XP_015248194
Ensembl:
ENSCVAG00000003372
UniProt:
A0A3Q2CBM0
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MSMNIFLLLLIWAFRVTETTTDVWRQCTELVPLDLLSFVLERDTSRVVPGVRLKQSAGLR
GVQFLSPDTSMSFLASQLLVNCDLFPKEFSIVVTVKVHRIAPKRDEYIFSLMGPKHVESP
AQEKDDVLENKNEKFISEDERQPNRKKKKENDGKPGEILLGLKLSQNGLTFIFKSHGKTA
EHWSLQGLHLSPNQWHTLVVVIGPQHMKLTVDCSSPLEIVPSRPFLSDLSIQGSRFHIGS
RGRWKGLFSGLMRQLVLVPNTDASRQICPSSDPQLTALSVPPLLLDLPVRKRQNDRHATS
SGTAGRLLVGLEKPCSALLQGQLWFNPLKKGLYVCDGSVWITVLEDHKRLDYVLEHQDLI
TSSETHDVEVFQIQGVGLMAAMAHRSSASGSAVYLWTQLGFKLYQNISTYGALAWKHFQI
GKKAYLVVSNSGTEKNKSLEKESESDSSVIYKWSRRRKQFVKFQTLQTYCARDWEAFNIN
DQTYLAVANHRKGNNNHTISSVIYKWNRSTKSFEVHQKLITLGAYDWEFFKVGPYHFLVV
ANAFDGVSMSVDSVIYVWIHGRFQVFQRIKTFCATDWEMFQIGSRVFLVVANGQRLEGNG
PDQYTVNSTIYELDMSGQLFVRFQDIVTYSALDWEFFSLGEEYFLVVANSYNGESYSLNS
ILYRWQGYEGFVPVHWLPTIGCSDWEFFSTNGESFLIYSSATEPFSKVFKLRTY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaacatattcctgctgctccttatctgggctttcagggtcacagagacaacg
acagacgtctggagacagtgcacagaattagttcccttggatcttctgtcttttgtcctt
gagagggacacatccagagttgtccctggggtgcgtttgaagcagtcagctggactgagg
ggggtccagtttctcagcccggatacatctatgagcttccttgcctcccagctcctggtg
aactgtgaccttttccccaaagagttctccattgttgttacagtaaaagtacaccgcatt
gcacccaagagagatgagtacatattttctctgatgggaccaaaacatgtggagagccct
gcacaggagaaggatgatgtattggaaaataaaaatgagaaatttatttcggaagatgag
cggcagcccaataggaagaagaaaaaggaaaatgatgggaaaccaggagagatccttctt
ggcctgaaattatcccagaatggcctgacctttatttttaaaagtcacgggaaaacagca
gagcactggagcttacaaggtctgcatctatctccaaaccagtggcacacactggttgta
gttattggccctcaacacatgaagctgacagtggactgcagttcaccattggaaattgtt
ccctcgaggcctttcctctcagatctcagcattcagggatccagattccacattggcagt
cgggggagatggaaaggcttgttttcaggcctgatgcgacaactggttctcgtgccaaac
acggatgcctcccgtcagatctgcccgtcttctgacccccagcttacagctctgtcagtt
ccccctctgctcttagacctgcctgtcagaaagaggcagaatgacagacatgcaacttcc
tctggaactgcaggacgactgttggtgggtttggagaagccatgctctgcattgctgcaa
ggccagctgtggtttaatcctctcaaaaaaggactttatgtctgtgatggatcagtgtgg
atcactgtgttggaggaccataaaagactggactatgttttggagcatcaggaccttata
accagctctgagactcatgatgtggaggtgtttcagatccagggcgtgggtcttatggct
gctatggctcacagatcctcagcctctggttcagctgtgtatctctggacccaattgggt
ttcaagctctaccagaacatcagcacttatggagctctggcttggaaacatttccaaata
ggaaagaaggcttatcttgtggtgtcaaactctgggactgaaaaaaacaaatctttagag
aaagagtctgaatcggactcttctgtgatttataaatggagcagaagaagaaaacagttt
gtgaagttccagaccctgcagacctactgcgctcgagactgggaggcttttaacattaat
gaccagacatatcttgctgtggccaatcacagaaagggaaacaataatcacaccataagc
agcgtgatttataagtggaacagatcaacaaagtcttttgaggtccaccagaagctgatc
actttgggagcctatgactgggagttcttcaaagttggaccgtaccatttcctagtggtg
gcaaatgcttttgatggagtgtccatgtctgtggactctgtaatctatgtttggatccat
ggaagattccaagtgttccagagaatcaagacattctgcgccacagactgggaaatgttc
cagattggcagcagagtatttctggttgtagctaatggtcagagactggagggcaatgga
cccgaccagtacaccgtcaactcaaccatctatgagcttgacatgagtggacagctattt
gttcgcttccaggatatagttacctacagtgctttggattgggagttcttcagcctcggg
gaagaatatttcttggttgttgcaaactcatataatggagaatcctactctctcaacagc
attctttacaggtggcagggatatgaaggatttgttcctgttcactggctcccaacgatc
ggatgcagtgactgggagtttttcagcactaatggagaatcctttctgatctactccagt
gccacagagcctttctccaaagttttcaagctcagaacctactaa
DBGET
integrated database retrieval system
