Cyprinodon variegatus (sheepshead minnow): 107096222
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Entry
107096222 CDS
T06110
Symbol
arnt2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107096222 (arnt2)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107096222 (arnt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
107096222
NCBI-ProteinID:
XP_015248278
Ensembl:
ENSCVAG00000002819
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MASELPGPVAMSGGVASSQVRMGGAVSGRGGKRRSGGMDFDDEDGEGPSKFSRENHSEIE
RRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNTSTDGAYKPSF
LTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEWLGSTLYEQVHPDDV
DKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGSAPLDHIS
LNRLSNMRKRYRNGLGPSKEGEAQYSVVHCTGYIKAWPPAGMTIPEEDTEAGQTGKYCLV
AIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGVITFVDPRCINVIGYQPQDLLGKDILE
FCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRLKNREWMLIRTSSFTFQNPYSDEIEYII
CTNTNVKQLQQQQAELEVHQRDGLTAYDLSQVPVAGVSSGVHDAGKSIEKTETLFSQERD
PRFAEMYTSISGSGDKKMMVPSSTAGGQPLYTQSSPFQQGHSGKSFSSSVIHVPGVNDIQ
SSGSSNQNLAQISRQLNPGQVAWSGNRPPFTGQSAKAQSSPFGIGSGHNYQTDPASYSPL
SSPATSSPSGNAYSGLTNRSTAFDVPGEGSQSGGQFQGRPSEVWSQWQNQHHSQQSGEQH
AHANPSQTEVFQDMLPMAGDPTQGTANYNIEDFADLGMFPPFSE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgagttgccaggtccagtagcgatgtctggaggagtggcgagcagccaggtg
agaatgggaggcgccgtgtctggccgcggtgggaagaggagatccggagggatggacttc
gatgatgaggatggggaggggcccagcaagttttcaagagagaatcacagtgagatcgaa
agacgtcggcgtaacaaaatgacccagtacatcaccgagctgtctgacatggtgcccacc
tgtagcgcccttgcccgcaaaccggacaagctgaccatcctgcgaatggccgtctctcac
atgaagtccatgcggggcacaggcaacacttctactgacggcgcctataagccctccttt
ctcaccgaacaggagctgaagcacctgatcctggaagcggccgacggcttcctgtttgtg
gtggcagcagagacgggccgagtcatctacgtgtcggactctgtgaccccggtgctgaac
cacccgcagtcagagtggcttggcagcaccctgtatgagcaggttcaccccgacgacgtg
gacaagctgagggagcagcttagcacctcggagaactcaatgacaggacggattctggac
ctgaagacgggaacagtaaagaaggaaggacagcagtcttccatgaggatgtgcatgggc
tcccggcgctccttcatctgccgcatgagatgcggcagtgcacccctggaccacatctcc
ctaaatcgcctgtccaacatgaggaagagatacaggaacggcctgggaccgtccaaggaa
ggagaggctcagtactctgtggtgcattgcactggatacatcaaagcatggccccctgca
ggaatgaccattccagaggaggacacagaggcggggcaaacaggaaagtactgcctggtg
gccattggcagactgcaggtgaccagctctcccgtctccatggatatgaacggcctgtcg
gttcctacagagttcctctcccgtcacaactcggacggcgtcatcacctttgttgaccct
cgttgcattaatgtcatcggttatcaacctcaggatctcttgggaaaggatattctggaa
ttctgtcatcctgaggaccagagtcaccttagagaaagcttccaacaggtggtgaaactg
aagggacaggtgttatctgtcatgtatcgcttccgcttgaaaaacagggagtggatgctg
atcagaaccagcagcttcaccttccagaacccgtactctgatgaaatcgagtacatcatc
tgcaccaacaccaacgtcaagcagttgcagcagcagcaggcagagttagaggttcaccag
agagacggtctcacagcgtatgatctctcccaggtacctgtggcaggagtcagcagtggc
gtccatgatgctgggaaaagcattgagaagacagagaccctgttctcccaggagagagat
ccacgctttgctgagatgtacaccagcatatctggctcgggagacaagaagatgatggtt
ccttcctccacggcgggaggacagcccctctacacccagagctctccttttcagcagggc
cactctggaaagagcttcagttcttcggtaattcatgttcctggtgttaacgacatccag
tcctcgggatcgtccaatcagaacctggctcagatctccagacagctgaacccaggccag
gtggcatggtcaggcaaccggcccccgttcaccggacagtcagctaaagcccagtccagt
ccttttggtattgggtctggccacaactaccagactgacccagcctcctacagcccgctg
tcatcccccgccacctcctcccccagtgggaatgcttattcaggcctgaccaaccgcagc
acagcttttgatgttccaggagagggaagtcagagcggaggccagttccagggtcggccc
agtgaggtgtggtctcagtggcagaaccagcatcattcccagcagtctggggaacagcac
gcgcacgccaatcccagccagacggaggtcttccaggacatgctgcccatggctggagac
cccacccagggaacggccaactacaacattgaggattttgctgacctcggcatgtttcct
cccttctccgagtaa
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integrated database retrieval system
