Cyprinodon variegatus (sheepshead minnow): 107096282
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Entry
107096282 CDS
T06110
Symbol
nckap1
Name
(RefSeq) nck-associated protein 1 isoform X1
KO
K05750
NCK-associated protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04810
Regulation of actin cytoskeleton
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107096282 (nckap1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107096282 (nckap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
107096282
NCBI-ProteinID:
XP_015248352
Ensembl:
ENSCVAG00000001983
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MSRGVMQPSQQKLAEKLTILNDRGIGMLTRVYNIKKQGQVWKACGDPKAKPSYLVDKNLE
SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI
DACQVFFDITVNFDLTKNYLDLVVTYTTLMIVLSRIEERKAIIGLYNYAHEMTHGASDRE
YPRLGQMIVDYENPLKKMMEEFVPHGKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS
APSTMLNPAQSDTMPCEYLSLDAMEKWIVFGFILCHAALNSDPAALSLWKLALQSSTCLC
LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEQALSHAGSMHRERRKFLRSALKELA
TVLADQPGLLGPKALFIFMALSFARDEIIWLLRHADNIQKKSTDDFIDKHIAELIFYMEE
LRAHVRKYGPVMQRYYVQYLSGFDAVVLNEMVQNLSVCPEDESIIMSSFVNTMTSLSVKQ
VEDGDVFDFRGMRLDWFRLQAYTSVSKASLGIADHKELGKMMNTIIFHTKMVDSLVEMLV
ETSDLSIFCFYSRAFEKMFQQCLELPSQSRHSICFPLLCAHFMSCTHELCPEERHHIGDR
SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKATGKKGE
QEREKPGVESMRKNRLMVTNLDKLHTALSELCFSINYVPNLVVWEHTFTPREYLTSHLEI
RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQ
HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS
EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVEVLTQMRTSFDKPDHMAALF
KKLTSVDSVLKRMTIIGVILSFRSLAQEALRDVLSCHIPFLVSSVEDFKDHIPRETDMKV
AMNVYELSSAAGLPCEIDPALVVALSSQKSENNSPEEEYKIACLLMVFVAVSLPTLASNV
MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD
KMTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSISASA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggagtgatgcagcccagccagcagaaactggcagaaaaactcaccatcctc
aacgacagaggcatcgggatgctgacccgtgtttacaatatcaaaaagcaaggacaagtt
tggaaggcatgcggtgacccaaaggccaagccctcctatcttgttgacaagaacctggag
tctgccgttaaatttatcgtaaggaagtttcctgctgtggagacgcgcaataacaatcaa
cagttggctcagctgcagaaggagaagtctgagatcctgaagaacttggctctctactat
ttcacctttgtggacgtcatggaattcaaggaccatgtgtgcgagctgctcaacacaatt
gatgcctgccaagtcttcttcgacattactgtgaactttgacctgaccaagaactatctg
gacctggtggtgacatacaccactctgatgatagtcctctcccgcatagaggagagaaag
gccatcataggattgtacaactatgcccatgagatgacccatggagccagtgacagggaa
taccccaggctgggtcagatgatcgtcgactacgagaaccctttaaagaagatgatggag
gagtttgtaccacatggaaagtcgctgtctgatgcattgatcagccttcagatggtctat
cccaggagaaatctgtctgctgaccagtggaggaacgctcagctgctctcactgatctct
gctccttccacaatgctcaaccctgcccaatcagacactatgccttgtgaatacctctca
ctggacgctatggagaagtggatcgtgtttgggttcattttgtgccacgcggcgctgaac
agcgacccggcagcgctgtccctgtggaagctggcgctgcagagctccacctgcctctgt
ctgttcagggacgaagtcttccacatccacaaggctgcagaggacctgttcgttaacatc
agagggtataacaaacgcatcaatgacatcagagagtgcaaagaacaggcgctgtcccat
gctggctccatgcacagagagagacgcaagttcctacgatccgctctgaaggagttggca
accgttttagccgaccagcctggacttctaggcccaaaggcattatttattttcatggcg
ttatcgttcgcacgagatgaaatcatctggctgctccgacatgcagacaacatccagaag
aaaagcacagatgatttcatagacaagcacattgcagagttgatcttctacatggaggag
ctccgagctcacgtccggaagtacggccccgtcatgcagcgatactacgtccagtacctg
tctggctttgatgcagtcgttctgaatgagatggtgcagaacctgtcggtttgtccagag
gatgaatctatcatcatgtcttcgtttgtcaacaccatgacctccctgagcgtcaagcaa
gtggaagatggagatgtgtttgacttcagggggatgagactggactggttcaggctgcag
gcttacaccagcgtttctaaggcaagcctcggtatagcagaccacaaggagctgggtaaa
atgatgaacaccatcatcttccacacaaagatggtggattccctagtggagatgttggtg
gagacatcggacctgtctatcttctgtttctacagccgtgcatttgaaaagatgttccag
cagtgtttggagcttccctcccaaagccgacactccatctgcttccctctgctctgcgct
cacttcatgtcctgcacacatgagctttgtcctgaggagcgtcaccatataggggatcga
agcctgtcgctgtgcaacatgtttctggatgagatggccaagcaggccaggaacctgatc
accgacatctgcactgagcagtgtactctcagcgaccagctgctgcccaaacactgcgct
aaaactatcagccaggctgtgaataagaagagcaagaaggcaacgggaaagaagggggag
caagagagggaaaaacctggagtggagagcatgaggaagaaccggctaatggtcaccaat
ctggataagctccacacagcgctgtcagagctctgcttctccatcaactacgttcccaat
ctggtggtgtgggagcacacgttcacaccgagagagtacctcacctcgcacctggagatc
cgctttaccaagtctatagttgggatgaccatgtacaaccaggccactcaggagatcgcc
aagcccagcgagctgctgaccagcgtccgggcttacatgactgtgctgcagtccatcgag
aactacgtcaccatcgacattactcgagtttttaataacgtcctcctgcagcagacgcag
cacctggacagccatggggagcccaccatcaccagtttatatacaaactggtacctggag
acgttgctccgtcaggtcagcaacggacacattgcctatttccccgccatgaaggccttc
gtaaacctgcctactgagaacgagctgaccttcaacgccgaggaatactccgacatttct
gaaatgcgctccctctccgagctgctggggccgtacgggatgaagtttctaagcgagagt
ctgatgtggcacatctcatcgcaggttgctgagctaaagaaactggtggtggaaaacgtg
gaggtgttgacccagatgaggacaagcttcgacaaaccggaccacatggccgcactcttc
aagaaactcacctctgtggacagcgttctgaagaggatgaccatcattggtgtcatcttg
tccttccgttctctcgctcaggaagctttgagagatgtgttgtcatgccacattccattc
ctggtcagttccgtggaggatttcaaggaccacatccctcgagagacagacatgaaggtg
gccatgaacgtctacgagctgtcctcagcagccggtttaccctgcgagatcgaccccgcg
ctggtggtggctctatcctctcaaaagagcgagaacaacagtccagaggaggagtataaa
atcgcatgtctgctgatggtgttcgtggccgtttccttgccgacgctcgccagcaatgtg
atgtcacagtacagccctgccattgagggccactgcaataacatccactgtttggccaaa
gccatcaatcagattgctgcagcgctcttcaccatccacaagggaagcatagaggaccgc
ctgaaggagttcctggctctagcctcatccagcctcctgaagattggccaggaaaccgac
aagatgaccacaagaaaccgagagtccgtctacctgctgctggacatgattgtgcaggag
tctcccttcctgaccatggacctgctggagtcctgcttcccttacgtcctgctgcgaaac
gcctaccacgccgtctacaaacagagcatcagcgccagcgcatag
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