KEGG   Cyprinodon variegatus (sheepshead minnow): 107096392
Entry
107096392         CDS       T06110                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107096392 (helq)
Enzymes [BR:cvg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     107096392 (helq)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    107096392 (helq)
SSDB
Motif
Pfam: POLQ_helical DEAD Helicase_C ResIII HTH_61 HHH_5 DNA_pol_lambd_f DUF4332
Other DBs
NCBI-GeneID: 107096392
NCBI-ProteinID: XP_015248512
LinkDB
Position
Unknown
AA seq 973 aa
MSSVRLHVKIKRVCARKRPRDALKAHLTPVRGGGGGSAPCAPCSSIMAESAAVEFCSDSE
DLFGDYDSILEDSSILARLDDAEQRERLQSQQLQGFRTPPPSTDAMSCSAAPLGDELEDL
PPSQLQFQEQIQDQAKRSRLQVAKATPMPPGGAAGIEEPEGAKRRGGVRKSMAEQLKEAM
LGNAAAPAAAPRSAALKEAVISKEISEAMEAISAEAADLGPFFGLPRKVKELMLRLRGIQ
RLYDWQETCLNLDCVHQRKNLIYSLPTSGGKTLVAEILILRELLCRRKDCLFILPYISLV
QEKVRGLANFGLELDFMVEEYAGSKGRFPPVKRRSRRSLYVATIEKAHSLVNSLIEGGRL
EDLGLLVVDELHMLGDGSRGAVIEMTLAKVLFMSKATQIVGMSATLGNIRDLQTFLGAEN
YTNDFRPVQLKEYVKLNDTIYEVDPKEENGFRFSRTLNFKYSSSMQKMDPDHIIALVTEV
IPLHSCLVFCPTKKNCENVAGMICKYLKEQFLQHREAEKAALLRELKDSGNGSMCPVLRR
TVPYGVAYHHSGLTSEERKLIEEAYSGGVLCLLTCTSTLAAGINLPARRVILRSPYVGVD
FLKRSQYKQMVGRAGRAGIDTIGESVLILQEKDRKLSGLWLLQVASSLQQLDAFLRRTLL
FVQQQQLCADRSLQDVVRQSVHILKEKELIAVTGTDSALQVTRLGRAAYKGSVDLAYCDV
LYRDLSKGLEGLLLNSYLHLVYLVTPYELVPQCNPDWMVYFRQFSLLSASEQKMSAAVGV
PESFVARKAAGQTVKKNPDLVAVKRMYLALVLFSLLKETNVWSVAERFQLSRGFVQTLLS
SASAFCSCVLHFTEELEELWPFKALLTELTRRLSYCVTAELIPLMEVAGVLEFRAKQLYA
AGYKTLSHLANADPAVLCRTIQNLYKKQALLMVASAKMLLNEKAAALQEEVDDLLTLPAD
LPPQRLQPKAADF
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgagctcagtgaggctccacgtcaaaatcaaacgagtctgcgcgaggaagaggccgcgt
gacgctctgaaggctcacctgacacctgtccgagggggaggaggggggtcagcgccatgc
gccccctgcagcagcatcatggcagaaagtgcagctgtggagttctgcagcgacagtgag
gatctgttcggggactatgacagcatcctggaggacagctccatcctggcacggctggac
gatgcagagcagcgtgagagactgcaatcacagcagctgcagggcttcaggactccgccc
ccttccacggacgccatgtcctgctccgccgcccccctgggcgacgagctggaagaccta
ccccccagccagctgcagttccaggagcagatccaggatcaggcaaagaggagccggctg
caggtcgccaaggcgaccccgatgcctcctggcggggccgctgggatcgaggaacccgag
ggggccaagaggcgtggcggggtgaggaagagcatggcggagcagctgaaggaggccatg
ctggggaacgcagcggctcctgctgctgcgcctcgctccgcggcgctgaaggaggcggtt
atttccaaggagatcagcgaggccatggaggccatctctgcagaggccgctgacctgggg
cccttcttcggcctccccaggaaagtcaaagagctgatgctgaggctgagaggaatccag
aggttatacgactggcaggagacgtgtctgaacctggactgcgttcatcagaggaagaac
ctgatctactcgcttcccaccagtggagggaagaccctggtggcagagatcctcatcctc
agggagctgctgtgccgcaggaaggactgcttgttcatcctgccgtacatctcactggtg
caggagaaggtgcgcggcctggccaacttcggcctggaactagacttcatggtggaggaa
tacgccggcagcaagggccgctttccccccgtgaagagaaggagcaggaggtcgctgtac
gtcgccaccatcgagaaggcgcacagcctggtcaactctctgatagaaggcggccggctg
gaggacctggggctgctggtggtcgatgagctccacatgctgggcgacggcagcaggggg
gcggtgatcgaaatgactctggccaaagttctgttcatgagtaaagccacccagatcgtt
gggatgagcgccactctgggaaacatcagggatctgcagacgtttctgggggcagagaat
tacaccaatgacttcaggccagttcagctgaaggaatacgttaaactgaacgacaccatc
tatgaggtcgacccaaaggaggagaacggcttcagattctccagaacgctcaattttaaa
tactccagctccatgcagaagatggacccggatcacatcatcgctctggtgactgaagtc
atcccgctgcattcctgcttggtcttctgtcccaccaagaagaactgcgagaacgtggca
gggatgatctgcaagtatctgaaggagcagttcctgcagcaccgtgaggcggagaaggcc
gccctgctcagagagctgaaggacagcgggaacggctccatgtgtccggtgctcaggagg
acggtgccgtacggcgtggcctaccaccacagcgggctgacctcggaggagaggaagctg
atcgaggaggcctactctgggggggtgctctgcctcctcacctgcacctccaccctggca
gcagggatcaacctcccggcccgaagggtcatcctgcgctcaccgtacgtcggcgtcgac
ttcctgaagaggagtcagtacaagcagatggtggggcgggccggtcgggccgggatcgac
accatcggggagagcgtcctcatcctgcaggagaaggacaggaaactgtccggcctctgg
ttgctgcaggtggcctcctcgctgcagcagctggacgccttcctgcggcggacgctgctg
tttgtgcagcagcagcagctctgtgcggacaggagtctgcaggacgtggtgcggcagagc
gtccacatcctgaaggagaaggagctcatcgccgtcaccgggacggactcggctctgcag
gtcaccagactgggccgggcggcttataaagggtcagtggatctggcctactgtgacgtt
ctctacagagacctgtccaaaggtctggaggggctgctgctcaacagctacctgcacctg
gtctacctggtgaccccctacgagctggtccctcagtgcaacccggactggatggtctac
ttcagacagttcagcctgctgtctgcctcggagcagaagatgtctgctgcggtgggagtc
ccagagagcttcgtggcccgaaaagcagcgggtcagacggtgaagaagaacccggacctg
gtggcggtgaagcggatgtacctggctctggtcctgttctccctgctgaaggagaccaac
gtgtggagcgtggccgagcgcttccagctgagccgaggcttcgtgcagaccctcctcagc
tccgcctccgccttctgctcctgcgtcctgcacttcactgaggagctggaggagctgtgg
ccgttcaaagcgctgctgaccgagctgacccggcgtctgagctactgcgtgacggccgag
ctcatccccctgatggaggtggccggggttctggagttcagagcaaagcagctgtacgcc
gccggctacaagacgctgagccacctggctaacgctgacccggccgtcctctgcagaaca
atccagaacctgtacaagaagcaggcgctcctgatggtggcctccgccaagatgctgctg
aatgagaaggctgcagctctgcaggaggaggtggacgatctgctgacactgcctgctgac
ctgccgccgcagcggcttcaacccaaagctgctgatttttag

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