Cyprinodon variegatus (sheepshead minnow): 107096411
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Entry
107096411 CDS
T06110
Symbol
rab11fip5
Name
(RefSeq) rab11 family-interacting protein 5
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107096411 (rab11fip5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107096411 (rab11fip5)
Membrane trafficking [BR:
cvg04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
107096411 (rab11fip5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
107096411
NCBI-ProteinID:
XP_015248537
LinkDB
All DBs
Position
Unknown
AA seq
1433 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNITVLRARGLRTKGKHGSRYLYTIIQVGKEKYTTGLVEKAEM
PVWEEECCFELLPGILEEGGRSAYPPGSGDLVLTVMHRVLIGLDVFLGQAIIPLDKIFQD
GVCPRDEWFKLNSKAGRKEKERGELQVTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRYAALSGSQGQPFGEEGGGVVEPREGEASEEKRSKMKDFFKGR
LRKSSDTRSCSSLASESSMSSIASDNLGPPPSLDLLSDPPSSPIYTSKVRADALYGETDL
AKKVLTSQHTTKILTHKRAFSDEASKITTALPRSNAAVESIKGQTMTQSKSSLCINGSHV
YDSEPSTPKTSGALPSKLVLLEKYSPLSRSLQNLTKKGEEKSSFAEGRRWSFDKLKKEEK
EGEKEAFGEEARTGGSPVHGAIPVISSASCSPEKGRKLRKTLFSTGRSDSLPSKSDLSQT
GSSSEGRLRGWFGSGDSQNKPRLEVSPKVESHSDVPHSHSPSSPVPPPCSVPSASPSGHI
SPDNHSYINLFTPSSSPSSNPLSPSNPFLPCMQRNPFFEELVAEELDKLPSFASCSSSGS
PPCHYTTLQADVDSEIGSNSRVSIKRERPQPVAKQKSLPALLPGAVSPYSPIHSAPCSIT
EHPGEWEESFDAFACSRLKSPKGQLPPEPPRTSPTLSCKHSFSLVDSSGFNYAQELQRCN
EEPPPLPPRRLIRSSVNDIFSDGWLHRGQELVVHKEAYLLSQTGVASLQHGREGESKRET
PSPNPSSSSGKSEAVGVHTQSYTNNNFGLMSEENPKRFKYEPLEDKADCLGGTLFEQDLY
GRASRGSYGQQRLKSHNSLINSEENTESKITSINSGSKGLIENDKFSVLSTLPSNLPDVS
YCSAEEADEANSPESTCLNNNISFSLTLGDLNMNVNDSDFNFIDSEGSSHSDIADNFKSN
LREKFTPQDLQLRDMFTLKDTYIPTLNSSFEISSSSRKLCKVTPVCQDSCQNCLCEVANV
TPCGPCGSKSQESVTLVQTNNSLDVETETLRGEQIKYNTGKDCDDNGNPGDRVDKPKQTE
TFSGVVSARIRPKGASRQNSNDSPSSHSKYGDREFVEFLSLVQNISEVSEGPLSYQPTKS
VLASSLALEQPDNPKLTSITDQNRHFFLNNISHMSSLENTVSNVAETSSTISFEDLHAKV
APNCRTPSKTKILKSLQIHEPCSPSIPSTLPLSTDTLICSPLIQSTSTGPSAKVSTSLAM
ATYTSPVSTTFTTDQPLKDARHSLLPEETQPAGSLPHQESRSHPVKPLTSSQPDKKEGRS
VLEKLKSTINPGRSTLHVTSEPEKSQEVTADRVAQYQHLTNMELISLLLQQEMDMEKQQA
ASEQQGAQLEKCEAELKKIKAQVRDLEDYIDNLLLRIMEQTPTLLQVRSRHKQ
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccctgatagatctggatgatgatcagcggtgggtgcccactcatgtaaatatc
acggtgctccgcgccagggggctgcggaccaagggcaagcacggcagccgctacctctac
accatcatccaggtggggaaggagaagtacaccaccgggctggtggagaaggcggagatg
ccggtgtgggaggaggagtgctgcttcgagctgctgccggggatcctggaggagggcggc
cggagcgcctatcctcctgggagcggagatctggtcctcaccgtcatgcaccgggtcctg
atcgggctggacgtgttcctgggtcaggccatcattcctctggataagatattccaggac
ggagtgtgtcccagagatgaatggttcaagctgaactccaaggccggaagaaaagagaag
gaacgcggcgaacttcaggtgactgtccaattcacccgcaacaacatgacagccagcatg
tttgacctcaccatgaaggacaagcctcgctctgcgttcggcaagctcaaggaccgcgtc
acggggaggaagaggggtgatgtggagtcttcctctgccattgtgcctggtcgttatgct
gcgctgtctggatcccagggacagccgttcggagaggagggaggaggtgtggtggagcca
cgagaaggggaggcatcagaggagaagaggagcaagatgaaagatttctttaagggaagg
ctgcgaaagtcgtctgacacccgatcctgctcatctctggcctcagagagcagcatgtct
tccatagccagtgataaccttggccctccacccagcctggatctgctgtcagaccccccc
agctcccccatttacacaagcaaagttagagctgatgctctctatggggaaacagactta
gcaaagaaagtgctcaccagccagcacactaccaagattcttacacacaagcgagccttc
agcgatgaagctagtaagatcaccacagctctccctcgatcaaatgctgcagtggagtcc
attaagggtcaaaccatgactcaatccaagtcatctctctgtataaatggaagccatgtc
tacgattcagagccttcaactccaaaaacctctggagcccttccgtccaaactggtcctg
ttggagaaatactcaccactgtctcggtctctgcagaatctcacaaaaaaaggagaggag
aagagttcatttgcagagggacgacggtggtcttttgataagctgaagaaggaggagaag
gagggagaaaaagaagcatttggtgaagaggctcggacgggaggaagccctgttcatgga
gcaataccagtcatatcttcagcaagttgttcacctgaaaaaggaaggaagctgagaaag
acattgttctctacagggaggagtgattctctgccatctaagtcagacctaagccagact
gggtcttcatcagagggaaggctcaggggctggtttggttccggggattcccagaacaag
ccaaggctggaagtttctcctaaggtagaaagccactcagatgtaccccattcccactct
ccttcctccccagttcctcctccgtgctccgttccttctgcctctccctctggtcatatc
tcacctgacaatcacagttacatcaacctcttcaccccttcctcctctccttcctcaaac
cctctctccccttcaaaccctttcctgccatgtatgcagcgcaaccctttttttgaggag
ctagtagcagaggagttagataagttgccttcttttgcttcatgctcctcttccggctca
cccccctgtcattacaccaccctacaagcagatgttgattctgaaattggcagcaatagt
agggtttccattaaacgggagcggccccagccagttgctaagcagaaatcactacccgca
ttgctacccggagcggtctcgccttactctcctattcactctgccccttgctctatcact
gaacatccaggagaatgggaggaatcttttgatgcctttgcctgtagcagactcaaatcc
cctaaaggtcaacttccgccagaaccaccaagaaccagtccgaccctatcttgtaaacat
agcttttcactagtggatagctctggctttaactatgcacaagaactgcaaagatgcaac
gaagaacctccacctttacctccaaggaggcttataagaagttcagttaatgacattttc
tcagacggctggttgcacagaggccaagagctagtagtccataaagaggcctatctgctc
tctcagaccggtgtggcatctttgcaacatggtagagagggtgagtccaaaagagagacc
ccttcacccaacccaagttcaagcagtggaaaatcagaggctgtaggtgtccacacccag
tcgtacacaaacaacaactttggtctcatgtctgaggagaaccccaaaaggtttaaatat
gaacctctggaagacaaagctgactgtttgggtgggacgttgtttgaacaagacttgtat
ggacgtgcaagcaggggaagttatggccaacaaagactaaaaagtcataattcattaata
aattctgaggaaaatacagaatctaagatcacatccattaactcggggtctaaaggactt
attgagaatgacaaattcagcgtattatctactcttccctccaacttaccagatgtttct
tactgttcagcagaggaagcagacgaagctaactcacctgaatcaacatgcctcaacaat
aacatatctttctcactgacattaggagatcttaacatgaatgtgaatgattcagacttt
aattttattgactcagagggatcttctcactcagacatagctgataatttcaaaagcaat
ctaagggagaaatttacaccgcaagatttacagttaagagacatgttcacattgaaggac
acctacatacctactctgaactcttcttttgaaatatcttcatcttctagaaaactttgc
aaagtaacaccagtttgccaagacagctgccaaaactgtctttgtgaagtagcaaatgta
acaccgtgtggcccctgtgggtcaaagagccaagagagtgttacactggttcaaaccaat
aactctctggatgttgaaactgaaacacttagaggtgaacaaataaagtataatacgggg
aaagactgtgatgataatgggaacccaggagacagagtggacaaacctaagcagactgag
acattttcaggtgttgttagtgcacgaatcagaccaaaaggagcttccagacagaacagc
aatgacagcccaagcagccatagcaaatatggagacagagagtttgtagagtttctatcc
cttgtccagaacatttccgaggtcagtgaaggacctttgtcttatcaaccaactaaatca
gtgcttgcttcctcactagctctagaacagcctgataatcctaaactgacttctatcact
gaccaaaacagacactttttcttgaacaatatatcacatatgtcttcactggagaacaca
gtatccaatgtggcagagacatcctctacaatcagctttgaagatctccatgcaaaagtt
gcaccaaactgcagaactccttccaaaacaaagattctgaaatctttgcaaatacatgaa
ccctgctctccctccatcccttctacgctccccctgtcaactgacaccctgatctgtagc
cccctcatacaatccacaagcacagggcccagtgctaaagtcagcacttcgctggctatg
gccacctacacctccccggtgtctaccaccttcaccactgaccagcccctgaaagatgca
cggcactcacttttacctgaggagacacagcctgctggcagcctgccccatcaggagagc
agatctcatccagtgaaaccattgacatccagccagcctgacaagaaggagggtcgctca
gttcttgagaagcttaaatctaccataaacccaggacgttccaccctccacgtcacgtct
gagcctgagaagagtcaggaggtgactgcagatagagtggctcagtatcagcacctgacc
aacatggagctcatctctctgctgctgcaacaggagatggacatggagaagcagcaggca
gcctctgagcagcagggggcgcagctagagaaatgcgaagccgagttgaaaaaaatcaag
gcgcaggttagagacctggaggactacatcgataacctgttactgcggatcatggagcag
acgcccacattactccaagtacgctcaaggcacaagcaatga
DBGET
integrated database retrieval system
