Cyprinodon variegatus (sheepshead minnow): 107096456
Help
Entry
107096456 CDS
T06110
Symbol
depdc5
Name
(RefSeq) DEP domain-containing protein 5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
107096456 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107096456 (depdc5)
Membrane trafficking [BR:
cvg04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
107096456 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
107096456
NCBI-ProteinID:
XP_015248604
LinkDB
All DBs
Position
Unknown
AA seq
1543 aa
AA seq
DB search
MKTNKTYKLVLHKKGFGGSDDELVVNPKIFPQVNLGDIIEIAHPTDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVVFRSTSAMVYIFIQMSCEMWDFDIYGDLYFEKAVNGFLSDLFTKWKEKNCSHEVTVVL
FSRTFYNAKTLDEFPEIVRGSMRQNHEGRYYEDFYRVVAQNERRDEWTSLLVTIKKLFIQ
YPVLVRLKEADGFPVGYNSTAVQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGV
GVFEVDRLLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNKATARDSRAGDDYNLP
HWINHSFYPSKSQSSCNSFTPRIKLAGRKPQGETLKSSRDHSLCSPKDSENSLPIQVDYD
AYDAQVFRLPGPSRIQRSTNFRIGRDKETSGRKSWGSVDISTGIGISPPVRSGGAEEQQS
LASDDSLEPVSNMLLIPRGPPAQYEVSSSLGYTSTRDLLEKMMDSQRDSSAPGRFTVGSA
ESTLHIRPGGYTPQRALINPFTPSRMPMKLTSNRRRWMHTFPIGPSGEAIQIHHQTRQNM
AELQGSQQKDPTHTSAELLELAYHEATGRRTTSKQAGDNSLYPCGGPEEFTGSPGSNNSN
GALSNSSPAFQDFSSSGADPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDR
QTLQNDYTEGCYDLLPHSDLERREDDSPVMTASQVFEEFICQRLMQGYQIIVQTKNRKPP
PVVATPLGSSPMYTRGLVSLRRAEEEETVYWLSMGRTFHKVCLRDKIITVTRYLPKYPYE
SAQIQYSYSLCPPHSDAQFVSCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFW
RTRFLLLPAGGARRVADGEGHWDVYGEGAGAGMGGCGDWVLLDGFIRFLEGLNRIRRRHR
SDRIIRQKGTPMKGLQVTSPVLPYAAEPVAPPQGKRGTSALTALLEMEQNQKTLEELQQQ
TKPSSAAADTSAVAAAVDSPRKDAAFILDFIRSPRSSYIYHSQLPVETTEPAEKGVQPGQ
TAGAPLPAGETANSDASGQSAAGALSLSSSSTLMEILEAIKHPTTGVQLLPEQKGLPLNC
FISAEVVYWLVNNVEGVATQGMAVDIMQKMLDEGVVAHASGDAMRTFVYGFYFYRIVGEK
DGQTSQLQAPAAGGWSTAAVEDFALFQRKWFEVAFLLEERRPCDLPAFLLPWLPSRPASY
ASRHSSFSRSFGGRSQAAALLAVVSPKEQKTMNLDVDVNNRSDRTEWCSCYYHGNFSLNA
AFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEFPFALTSYLYGDPLRAQLFIP
LNIQCLLKNGSDNLFEGFEPETYWDRMQLFQEAILYRFGFVHDKFSASSFNFPAENKPQY
IHVTGTVFLQLPYSKRKYSGGQNRRRRNSTTSNSQSPFGGEERVGFYWAYNTMLTKAWRT
GVLGDERLADRLLRDLTDFCSNKDNRLQSFWDSCQEKMNASAP
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaataagacgtataaactggtgcttcacaagaaaggttttggaggaagtgac
gatgagcttgtcgtcaatccaaaaatcttcccacaagtcaacctgggcgacatcattgag
atcgctcacccaacagatgagtacagtcctctgctgctgcaggtgaagagcctaaaagag
gatcttcagaaagagaccatcagcgtggatcagactgtagcgcaggcgttcaagcttcgt
gcttaccaggatgttatcgtaaacattgtcgacccaaaggatgttacactggacttggtg
gagctgacatttaaagaccagtacattggaagaggagacatgtggaggctgaagaagagt
ctggtggtttttagatcaacctctgccatggtttacatcttcatccagatgagctgtgag
atgtgggacttcgatatatacggggatctgtactttgaaaaagccgtcaacggattcctg
tctgacctgtttactaaatggaaggagaagaactgcagccatgaagtgaccgtcgtgctt
ttttcacgcacattttataacgccaaaactttggacgagtttcctgagattgtgagagga
tccatgagacagaaccacgagggacgctattatgaagacttctacagggtcgttgctcag
aatgagagacgagacgagtggacgtctctactggtcaccatcaagaaactcttcatccag
taccctgttctggtgcgacttaaagaagcagatggttttcctgtgggctataattccact
gctgtccagggaaactacctggaggctatcaatctttcctttaacgtgtttgacaagcac
tacatcaaccgtaactttgaccgcaccggccagatgtccgtggtcatcactcctggggtg
ggagtgtttgaagtggaccgtctgctcatgattctcaccaaacagcgaatgatcgataac
ggcatcggtgtggacctggtgtgtatgggggagcagccgctgcacgctgtgccgctgttt
aagctgcacaacaaggcgacagccagagactcacgtgctggagatgactacaaccttcca
cactggatcaaccacagcttctatccgtccaaaagccagagttcctgtaactcgttcact
cctcggatcaagctggctggacggaagcctcaaggagaaaccctgaagagcagcagagat
cactctctgtgttcacctaaagactcggagaacagcctccctatacaggtagactacgat
gcttatgatgctcaggtgttccgccttccgggtccgtccagaattcagaggagtaccaac
ttcaggattggccgagacaaagagacgagtgggaggaagagctggggttctgttgacatc
agcacaggcatcggtatatctcctccggttcgttcaggcggagcggaggaacagcagagc
cttgcctccgatgacagcctggagcccgtgtccaacatgctgctcataccgcggggccct
ccggcccagtatgaagtcagcagctctctgggatacaccagcaccagagacttgttggag
aagatgatggactcccagcgggactccagcgctcctggtcgtttcacagttggcagcgct
gagtccacgctgcatatccgtcctggaggttacacccctcagcgagcacttataaacccc
ttcacaccctccaggatgcctatgaagctcacctccaaccgccggcgctggatgcacacc
ttccccatcggcccttctggagaggctatccaaatccatcaccagaccagacagaacatg
gcagaactacaaggcagccagcagaaagatccgactcatacctctgctgagctactggag
ctggcttatcacgaggccacaggaaggcgaacaacctccaagcaagcaggtgataacagc
ctttatccctgcggagggccggaggagttcactggaagtccagggagcaacaacagcaat
ggagctctgagcaacagtagccccgcgtttcaagacttctccagcagcggtgcagatcca
accctgctgctgtctgcacccccgacagtgcccagcttctgctgcacggtgggagtggac
tggaagtccctgaccacaccggcatgtctccccctcaccaccgactacttccctgaccgc
cagacgttgcagaacgactacaccgaaggctgctacgaccttctgccccacagtgaccta
gaaagacgagaagatgactctccagtgatgacggcgtctcaggtgtttgaagagttcatc
tgtcagaggttaatgcaaggatatcagatcatcgtccaaacaaagaacagaaaacctcct
cctgtagtggccacgccccttggcagtagtcctatgtataccagaggtctggtgtctttg
cgtcgagcagaagaggaggagacggtctactggctcagcatgggccgcaccttccataaa
gtctgcctcagagacaagatcatcactgtgacccgctacctgccaaagtatccgtatgaa
tctgctcagatccagtacagctacagtctatgtcctcctcactcagacgctcagtttgtc
tcttgctgggtggagtttggacatgagcgactggaggaatacaagtggaactacctggac
cagtatatctgttctgccggctctgaggacttcagcctgatcgactctctgaagttctgg
aggacgcgcttccttctgctgcccgctggaggggctcggcgggtggcggacggtgagggg
cactgggacgtgtacggggagggagcgggtgctgggatgggcggatgtggggactgggtc
ctgctggacggcttcattcgctttctggagggcctcaaccgcatacgacggcggcatcgc
tctgacaggatcatcaggcagaaaggaacgccaatgaaaggactacaggtcaccagtcct
gttctaccttacgcagctgagcctgtagcgcctccacaaggaaagaggggcacatcagct
ttgacagctttgctggagatggagcagaaccagaagacactagaggagctgcagcagcag
accaaaccctcctccgctgcggccgatacgtctgctgttgccgccgctgtagacagcccc
cgtaaggacgctgcctttattttggattttattcgtagccctcgctcctcctacatctat
cattctcagcttcctgtggaaaccactgagccggcagagaagggcgtacagccgggacag
acagctggagcaccactgcctgcgggggaaacggcaaactctgatgccagtgggcagtct
gctgcaggggctctctctctgtcctcctcatcaacgctaatggagatcctcgaggccatc
aagcatcccacaaccggtgtgcagcttcttccggaacagaaaggcctcccactcaactgc
ttcataagcgccgaagtggtttactggctggtcaacaacgtggagggcgtggccactcag
gggatggctgtggatataatgcagaaaatgctggatgaaggtgtggtggcccatgcttca
ggagacgccatgcgtaccttcgtctacggcttctacttctaccggatcgtaggagaaaaa
gatgggcagacctcccagcttcaggctccagctgctggtggctggtcgactgcagccgtg
gaggattttgctcttttccagaggaagtggtttgaggtggcctttctgttggaggagcga
cggccctgcgacctcccggccttcctccttccctggctccccagccggccagcctcctat
gcaagtaggcacagctccttcagccgcagctttgggggacgcagccaggccgccgcactg
ttagctgtagtttccccaaaagaacagaaaacgatgaatctggatgtggacgtcaacaac
cgcagcgaccgaaccgagtggtgcagctgttattaccatggcaacttctctcttaatgct
gcctttgagatcaagctccactggatggccgtcacagctgctgtgctgtttgagatggtg
caaggctggcacaggaaagcagcctcctgtggcttcctgctggttcctgttctagagttt
cctttcgcgttgacatcctatctgtacggagacccgctgagagcccagctcttcatccct
ctgaacatccagtgtctgctgaagaacggcagcgacaacctgtttgaaggttttgaacca
gagacgtactgggacaggatgcaactcttccaggaagccatcctctacaggttcggcttc
gtgcacgacaagttttctgcctcgtctttcaatttccccgcagagaacaagcctcagtac
atccatgttacagggacggtgttcctacagctgccgtactccaagaggaagtattcaggc
gggcagaatcggcgccgcaggaactccactacttccaacagccagagcccgttcggcggt
gaggagagggtgggcttttactgggcctacaacaccatgctgaccaaagcctggaggacg
ggggtgctgggggatgaaaggctggccgaccgcctgctcagggacctgaccgacttctgc
tccaacaaggacaacagactacagagcttctgggacagctgccaggagaaaatgaacgcc
agcgccccctga
DBGET
integrated database retrieval system
