Cyprinodon variegatus (sheepshead minnow): 107096484
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Entry
107096484 CDS
T06110
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107096484 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107096484 (lrrc4b)
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
NGL family
107096484 (lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
DUF7617
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
107096484
NCBI-ProteinID:
XP_015248636
Ensembl:
ENSCVAG00000016049
UniProt:
A0A3Q2E9A7
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLVHLLLRLLLILHGPEITGASSTCPSLCTCSNQASRVICTRQ
NLEQVPESISVNTRYLNLQENSIQVIKSDTFKQLRHLEILQLSKNQIRQIEIGAFNGLPN
LNTLELFDNRLTLVPTQAFDYLSKLRELWLRNNPIETLPSYAFNRVPSLRRLDLGELKKL
EYISDAAFVGLVNLRYLNLGMCGLKDIPKLTPLVRLEELELSGNRLEIIRPGSFQGLVSL
KKLWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVC
NCDVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNV
TEGMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYT
CMVTNAAGNTTATAVLNVTAADALVNITFFTTVTVETDNGGPNDYAQVDETTISIPSDLL
SEVVPTTDSSLTGGWLSSSPRATRPTFTVPFTEPGFSGLDDVMKTTKIIIGCFVAITFMA
AVMLVVFYKLRKQHQLHKHHGPARAIEIINVDDDLGPGASGRGSGISGGSTVTQSAGSGL
GGCQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNSNMMGLGMGTGPGVGLNNNNNPSPC
SQAQSISCSQVPSSTGGGTSTGGTLPSNVALPQLGLHSSLKGLIGKGQNEPLLFKSGSKE
NVQETQI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggtc
catctgctcctgcggctccttctcatcctccacgggccggaaataacgggagcctcctcc
acctgcccttccctttgcacgtgctccaaccaggccagccgagtcatttgcaccaggcag
aacctggagcaggtgcctgaaagcatatccgtcaacacgcgatacctcaacctgcaggag
aactcgatacaggtcatcaaatcggacaccttcaagcagctaaggcaccttgaaattctt
cagctttccaagaatcagataagacaaattgaaatcggagcatttaatggcctccccaac
ctcaacacgctggagctctttgacaaccgcctcacgttggtgccaacgcaggccttcgat
tacctcagcaagctacgggagctgtggttacgcaacaaccctattgagaccctccctagt
tatgccttcaaccgtgtgccctccctgcgtcgcttggacctgggtgagcttaaaaagttg
gaatacatctctgatgcagcctttgttggccttgtcaatctacggtacctgaacttgggt
atgtgtgggcttaaagatattcccaaactgacaccccttgtgcgtttggaagagctggag
ttgtcagggaaccgcctggagataattcgtcctggatctttccagggactggtgtctctt
aaaaagctgtggctaatgcactcacaggtttctgtgattgagcgcaatgcctttgatgat
ctaaaaaacctggaggagctcaatctctcacataattccctgcactccttgcctcatgat
cttttcacaccccttcaccaactggagagggtgcacctcaaccataatccttgggtctgc
aattgtgatgtactttggcttagttggtggctgaaggagacagtgcccagtaacaccacc
tgctgtgcacgctgccatgctcctccagttctcaagggcaagtacattggagaacttgac
cagagccacttcacctgctttgcacccgtcattgtagagccccctactgaccttaatgtg
actgaagggatggctgcagagctgaagtgtcgcacaagtacctctacaacgtccgttaac
tggattactcccaacggtacactaatgacccatgggtcttaccgagtccggatttctgtt
ctacatgatggcacattgaacttcacaaatgttaccctgagggacacaggccagtacact
tgcatggttaccaatgctgctggaaacactactgcaactgctgtcctcaatgttactgct
gctgatgcccttgtcaacatcaccttttttacaactgttactgtggaaacagataatgga
ggacccaatgattatgcacaggttgatgagaccaccatatccattccctctgacctattg
tctgaggtagttcctaccacagattcctctctaactggtggttggttgtcctcctctcca
cgggcaactcgcccaactttcactgtgccattcacggaaccaggtttctctggcctggat
gatgtgatgaagaccaccaagatcatcattggctgcttcgtagccatcaccttcatggca
gcagtgatgctggtggtgttctataagctgaggaagcagcatcagctgcacaaacatcat
ggccctgctcgtgcaattgagatcatcaatgtggatgatgacctaggtcctggggctagt
ggccggggcagtggaatatctggaggctccactgtaacacaaagcgcaggcagtggatta
ggaggatgccagagtctcaggttgcaccatccagagattgttaatctaccaaacctagct
cgatcagagcacctcaaccactactacaaaacacatcatttcaacagcaacatgatgggc
cttgggatgggcacagggccaggtgtgggcctcaacaacaacaacaacccctcgccatgc
tctcaagcgcagagcatatcctgctcccaggttccatctagcactggtggggggacgtcc
actggtggcacccttccgtccaacgtagccctgcctcagttgggtctacatagttctctg
aaaggcctgataggaaaaggccagaatgaaccactccttttcaagagcggctcaaaagaa
aatgtgcaagagacccaaatctaa
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integrated database retrieval system
