Cyprinodon variegatus (sheepshead minnow): 107096603
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Entry
107096603 CDS
T06110
Name
(RefSeq) spermatid perinuclear RNA-binding protein-like isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107096603
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107096603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
CDK2AP
Motif
Other DBs
NCBI-GeneID:
107096603
NCBI-ProteinID:
XP_015248820
Ensembl:
ENSCVAG00000011648
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MRSFRSFANDDRHVMAKHSSVYPAPEELEAIQKLVSTVEGALKKVSDWMDGLKNTSGKTP
SCRNTEEEDAAETESEGTSVLCGVTRVGLVAKGLLIKGDMNLELVLMCREKPTKLLLYTI
SANLPLQIQAMTEDGYEVRSCPSEAAIQVCSTKDPRLTLKITLSSLAMREEHSSTEAEED
HDREENEQRCEEKEEEDVLDALKCQAALAALRHAKWFQARVTDLKSCVIVLRVLRDVCNR
QPVWEPLKGWPLELICEKAIATCNRALGPGEALRRVMECIASGILLPGGPGVHDPCEREP
RDVLTHLSAQQANALTHSAQHALRLIAFGQLYKVLNMDPLPANKASPRLLEGSCQKRLRN
DSGCEDRDFSKRIKVLDWRMTDPNHPMNALMRLNQIHPGLQYRLLCQSGPVHAPVFTMSV
EIQGTTYQASGNSKRTAKLQVALKALQALGYVLGSDADLDSLSADEKSDGEGKNDRMSTS
SSSTSVTSSTEAQESRAPGPILTAGGKNPVMELNEKRRGLKYELISESGSSYDKRFIIEV
EVDKQVFRGTGPNKKVAKASAALAALNSLFSGPKSTNGKKKRLNPPPKRHVTTVLTIPSL
AARPPRVPVIPRAPYISSPPTHGYIPPGFGAPYGYSPAGHLPAYSGLYIDSAYYQPQTIA
TPIIIHLGPQDMF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgttccgatcatttgcaaacgacgaccgccacgtcatggccaaacactccagt
gtctatccagccccggaggagctggaggccatccagaagctggtgtccaccgtggaggga
gccctcaagaaggtctctgattggatggatggcctgaaaaacacctcaggaaaaactccc
agctgtagaaacacagaggaggaagatgctgctgagacagagtctgaaggtacatcggtg
ctgtgcggggtgacacgggttggcctggtggccaaaggtctgctgattaaaggcgacatg
aacctggagctggttctgatgtgcagagaaaagcccaccaagctgctgctgtacaccatc
agcgccaaccttcctctacagatccaggctatgaccgaggacggatatgaagttcggtcg
tgtccttctgaggcggcgatccaggtgtgcagcaccaaagacccccggctgaccctgaag
atcaccctctcctcattagccatgagggaggaacacagctccacagaagcagaagaggac
cacgaccgcgaggaaaatgagcagaggtgtgaggaaaaggaggaggaggatgtcctggac
gctctgaaatgccaggctgctctggcagcactgcgacatgccaagtggttccaggcccga
gttactgacctaaagtcctgcgtcattgttctgagggtcctcagagacgtttgcaaccgt
cagccagtgtgggagcctctcaaaggatggccattagagctgatctgtgaaaaggccatc
gccacctgtaaccgggcgctgggtccaggggaagctctgcgtcgtgtcatggagtgtatt
gcctcaggaatccttttaccaggaggcccaggagttcacgatccctgcgagagggaaccc
agagatgtcctgacgcacctgagcgcccagcaggctaacgccctcacacacagcgcgcag
catgcactgcgcctcatagcgttcggacagctttacaaggtgctgaatatggatcccctg
ccggccaacaaggcctctccgaggctgttagaaggcagctgtcagaagagactccgaaac
gactctggctgtgaggacagagacttcagcaagcgaataaaagttttagactggaggatg
actgaccccaaccatcccatgaacgctctaatgcgtctgaaccagatccacccgggcctc
cagtaccgtctgctgtgtcagtcgggcccggtccacgctccggtcttcaccatgtccgtg
gagatccagggaaccacctaccaggcctcaggaaactcaaagaggaccgccaagctccaa
gtggcacttaaggcgctgcaggctctgggctatgtgctcggctcagatgcagacctggac
tctctgagcgctgatgagaagtcagatggagaagggaaaaacgacaggatgtccaccagc
tccagctccacatccgtcacctcctccacggaggcacaggagtccagagctccaggtccg
attctgacggcaggagggaaaaacccggtgatggagctgaacgagaagcggcgcggcctg
aagtacgagctgatttcagagagcggaagcagctacgacaaacgtttcatcatagaggtg
gaggtggacaaacaggtgtttcggggaactggtcccaataagaaagtagccaaagccagt
gcagcgctcgctgctctgaacagcttgttctctggacccaaatcaacaaatggcaaaaag
aaacgactcaaccctccgccaaagcgacacgtaaccacggtgctgaccatcccgtccctc
gctgccagacctccacgggtcccggtgatccccagagccccgtacatcagctccccaccc
acacacgggtacatccctccaggtttcggtgctccttatggctacagccctgcaggccac
ctccctgcttacagtggcctgtacatcgacagtgcctattaccagccgcagaccatagcc
acgcccattatcatccacctgggccctcaggatatgttctga
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