Cyprinodon variegatus (sheepshead minnow): 107096625
Help
Entry
107096625 CDS
T06110
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107096625 (ddx17)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107096625 (ddx17)
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107096625 (ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107096625
NCBI-ProteinID:
XP_015248844
Ensembl:
ENSCVAG00000010921
UniProt:
A0A3Q2E3A9
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MRGGSSYGDRDRDRDRGRDRPRFGGGMGGRGGPPPMKFGNPGERLRKKRWNLDELPKFEK
NFYTEHPEVQRMSQFDVEEFRRKKEITIRGSGCPKPVTAFHHAQFPQYVIDVLMQQNFKE
PTAIQSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT
RELAQQVQQVAYDYGKTSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRE
YIQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDD
LTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINY
DYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVD
SGRGGGGGGRMRYRGGSSNNPNLMYQDECDRRMRSGGGGKDSRGGFNRDGRNNRDDDQSS
ASSYRDRNRDHRNNYNSGSDQYQNYNNNGGGYNSRGGGGLPGGGQDIPNQPQGQFVQGPP
PPPPSGAPQPLMAQQFPPPPQPPLMGFMGQPPYPPFPSAPPPPPGQQPPRK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagggggggttcctcgtatggagacagggatagagacagagatcgtggacgtgacagg
ccacggtttggagggggcatgggcggccgtggtggacccccgcccatgaagtttggaaat
cctggtgagcgactccgcaaaaagaggtggaacctcgacgagctgccgaaattcgagaaa
aatttctacaccgaacacccagaagtacagcgcatgagtcaattcgatgtggaggagttc
cgtaggaagaaggagatcaccatcagaggctctggttgtccaaaacctgtgacggctttt
caccatgctcagtttcctcagtatgttatagatgtgctgatgcagcagaacttcaaggag
cccacagcaatccaatcccaaggttttcctgtggccttgagtgggaaggacatggtggga
attgcacagactggttctggaaagacactggcttatctccttcctgctattgtacatatt
aaccatcagccctatctggagagaggggatggacccatatgcctggtccttgctccaacc
agagagctggcccagcaggttcagcaggttgcctacgattatggcaagacctcccggatc
aagagcacctgcgtttatggtggagcacccaagggaccacagattcgagaccttgagaga
ggcgttgagatctgcattgccactcccggtcgcctcattgacttcctggaggcggggaag
accaacctgcgtcgctgcacctatttggtgttggatgaggccgaccgcatgttggatatg
ggctttgagccacagattcgcaagattgttgaacagatcagacctgacagacagaccctg
atgtggagtgcgacatggccgaaagaagttcgacagcttgcagaggacttcttacgggaa
tacatccagattaatatcggcgctctggagctcagtgccaaccacaacattcttcagata
gtggacgtctgcatggagaatgaaaaggacaacaaacttattcagctgatggaggagatc
atggctgagaaggagaacaaaaccatcatctttgtggagaccaaaaaacgatgtgatgat
ctcacacggaggatgaggcgtgatgggtggccagccatgtgtatccatggagacaagagc
cagccagagcgagactgggtactcactgagttcaggagcggcaaggcccccatcctgatt
gcaactgatgttgcctctcggggtctggatgtggaagatgtaaaattcgtcatcaactat
gactatcccagctcctctgaggattatgtccaccgtattggccgtacggcccgcagtacc
aataagggcacagcctacaccttcttcaccccaggaaacctgcgacaggccagagacctg
gtccgggttctggaggaagcccggcaggccataaatccaaaactgcttcaactcgtggac
tcgggccgtggaggtggaggcggtggcagaatgcgttaccgtggcggcagctccaacaac
cctaacctaatgtaccaagacgagtgtgatcggcgcatgcgctctggtggaggcggcaaa
gatagccgcgggggctttaaccgcgatggccgcaacaaccgcgacgacgaccaatcctca
gcgtcctcctacagagacagaaaccgagatcacaggaacaactacaactccggctccgat
cagtaccagaactacaacaacaacggtgggggctacaactctcgtggcggaggaggcctg
cccggcggcggtcaggatatacccaaccagccacagggccagttcgtccagggccctcct
cctccgcctccatcgggggccccacagccactgatggcgcagcagtttcccccgcctcca
cagccgccactcatgggctttatggggcagccgccataccctccttttccctctgctccc
cctcctccccctggccagcaaccccctcgaaaatag
DBGET
integrated database retrieval system
