Cyprinodon variegatus (sheepshead minnow): 107096660
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Entry
107096660 CDS
T06110
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107096660
03036 Chromosome and associated proteins [BR:
cvg03036
]
107096660
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107096660
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107096660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
107096660
NCBI-ProteinID:
XP_015248905
Ensembl:
ENSCVAG00000010189
UniProt:
A0A3Q2CS46
LinkDB
All DBs
Position
Unknown
AA seq
1977 aa
AA seq
DB search
MEDKKKKKEEKKKRETSQKVPEQKIKVPEPAKPSCPQPLAAPGSVSPSPGPVAPSSPSPG
AAGGSAQVPPGGGNNAKQRTAVANGQPSSSSSSSPSGSQSAQQQQRYMSREVPPRFRGQQ
DHKVLLKRGQPPLSSMLLGGGEASAGAGGGGSGWDGGPSLQGADSPNANTDGNTDSNVGS
SPPSPPNSSSFCVAALSSSTTSTYANSTWGAGSSSQSSSQGCGKVFMDGTDLDEWPSITA
GPKLSSEGAGGGMQEQDCPGNNNSSASWGERNMQQKGGTAGGGEGNMDNLSPPRSSPLSS
SSSPNECAQPSGVWVSSTPSQVEVGHGSAASYNSKVSHLPGPPESPLGGSSSVPGANFNP
NVNPSAWPALGQSGTSVQQHSSVTSASSFSASTTVITTQTLSSVNQTGLYQQHTETAVGA
KTGEQQHLGNPGQEPCPEGAAKEAGPNQAGSNEGNSKVEGEASGNTSVSSSWSAMPPVSS
EIGTGVSQADGWGGGVTGAQGQEESVWRFGSQYDKAGWGRGNGGGSTNPVESQGAWEGGS
TEANWGGTSESVSSVNSAIGSGGEVEGSSISSSTDSAGGGGSLDDSASQNLANITKAWDN
QKGMEGGDGVVGEWGGAGGQDGAVGEGGGHSSSSGAGSVAGSGSGQKERSAQQHSNQSSG
AEVALLSMLNRSDLDPRVLSNTGWGQTQIKQNVAWDLDTSKGVGNGNDRNPSSSSAFSSA
AINTTTNRSSRYPSEGGSVSNNASSGSLNSSSSASRDNWDGGTAQPAGGPFMSSSTMRKP
GPPEDDAQGGPGKSAGGWGELPPEKEGKGWRTDDQQWGGHRGGRKNWQDFEQQGSGWGDA
AEDKGTGGWKGSAREAGGWGEEWGKRDSTSRAGWGDGRSRVGSNSDEGSSWGNLEEGGPQ
RGGWGGGGGGDAGGGKSHQDWGNAKPNAAQIPNSQVAPMKAQNQQQQSQGQHPPGGWNSR
PSAGGGGGQLSKNPNQSLGWTSGPIPQISGGAGDSLEPSGWEEPSPQSISRKMEIDDGTS
AWGDPTRYNNKNVNLWDKNSATPGPNHGQQGPPPPVQQQPPRRQHSNNSNPGSGAVGMWG
GTTQNVDDGTAAWGQASDAATSWGDPDDSSKVSGWRNPSPNPSKPGVKTVESWGGKSDGS
IVASRHPSWEEDEDSGGGGVWNSTGSQGSGSSFNSGGWGQGHAGKRGNVKTGAADSWMNP
VSRQFSNMGLLDDPGMEKKLDVDKRGMNDYNGEMRRGGRSGGGYRMPSSKDMGPGDMGPY
GEKMGGHGVFGGMPQPRGMHQPGMHSMNASPGLRSQVPHQFLSAQVPGPMVKQMPSPGGS
VGGVGGVGGVASVGGGVLTPPISPQQLAMLSNIYPHVQQFHLACQLLIQQQQQQQQQQQQ
ILQNQRKFPQPQPLRQQTDPQQLARIMAIIQQQRQQQQVGVGGATPGGGNPKLSPSHIGG
GVSKQSMVDPLPHAGMGGNLPDLHAKSQGMYSGLTGGGNLPTLELSPMMGGMKDMSGQQS
RFKWMMEGHSPAPSPPDSALHKNGPLPSSIKVRGGSPYSQYEMLGSAGLGIPPEGSAESW
HRTPGSKMGNKPATSSWPPEFQPGVPWKGIQSTGDPESDPYMTPGRVLGSPASPNLNDPD
HPLLRDNIGPNPSLNTSLPSPGAWPYSASDSPLSNAHSTGKYSEYKPSWPPEPIGQNKLW
KANRNSSQLPRPPPGLTNQKQASPSPWGTGGPRLARSWGGMNQESRFGSGSAWSDGGSSR
GSCWLLLRNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALVRYNSRQEAAKAQGALHM
CVLGNTTILAEFVSEEEVARYFAHSQAEGASSGGAAGNGAPSSSGTGTAVASSGGSSPGS
ERPAVGTSAAGGGNGNAGGERASGSGWQSLDGTGASSETAPAQGPGLAIFSQWSTNGAGE
GSVGGVESGRSGLWGGINAGYPSSSLWGAPQMEERHQMDSSAGLLPGDLLGGGADSI
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagaagaaagaagagaaaaagaaaagggaaacctctcagaaggtg
ccagaacagaaaatcaaagtgccagaaccagccaagccctcctgtccccagccgctcgcc
gccccaggctcagtgtcccccagccctggccccgtcgccccatcgtcccccagtcctggt
gccgctgggggttccgcccaagtccctcctggtggtggaaacaatgcaaagcagcgtact
gctgtggccaacggacagccctcctcctcctcctcttcgtctccttctggaagtcaaagt
gcgcagcagcagcaacgatacatgtctagagaagtcccaccgcgattccgcggccagcag
gaccataaagtgctactgaagaggggccagccacctctgtcctccatgctgctgggggga
ggggaagccagcgcaggggccggcgggggcggcagcgggtgggatggtggcccatcctta
cagggggcagatagccctaatgcaaacacagatggaaacacagattccaacgtgggttca
tcccccccttcaccgcccaactcatcctcattttgtgttgctgctctgtcgtcttctact
acttcaacttatgcaaattccacatggggggcaggctccagcagccagtcctcctctcag
ggctgcgggaaggtgtttatggacgggactgacctggatgaatggcctagcatcaccgcc
ggccccaaactgagttctgaaggggccggaggagggatgcaggagcaggactgccctggt
aacaacaacagtagtgcctcatggggggagagaaacatgcagcagaagggaggaacagcc
ggaggaggagaaggcaacatggacaatctttccccacctcgctcctctcctctttcttcc
tcctcctcgcctaatgaatgtgctcagccaagtggtgtgtgggtctcttccaccccgtcc
caagtggaagtaggccacggctcggcagcgtcttacaattccaaagtctcccatcttccc
gggcctccagagagccccttgggtggcagcagcagcgtccctggtgccaacttcaaccct
aatgtgaacccttctgcctggcccgccctaggccagagcgggacctccgttcagcaacac
tcgtccgtgacttcagcttcctcattctctgccagcaccactgtcatcaccactcagaca
ctttcatctgtgaatcaaactggtctctatcagcagcacactgaaacggctgtgggagcc
aagactggagaacagcagcacttagggaatccagggcaggagccatgtccagagggggcg
gcgaaagaagcgggaccaaatcaggcaggcagcaacgagggaaactctaaggttgaaggt
gaagcaagtggcaatacttctgtctcttcatcttggagcgccatgcctccggtgtcatct
gaaattggcacaggtgtctcccaggccgacgggtggggtggaggggttaccggggctcag
gggcaggaagaaagtgtttggaggtttggtagccagtatgacaaagcagggtggggcagg
gggaatggcggggggtcaaccaacccagtcgaatctcagggagcttgggaaggagggagt
acggaagcgaattggggtggcacttcggaaagtgtgagttctgttaattcagcaatagga
agtgggggagaggtggaagggagcagcatcagcagcagtacggacagcgcgggcggcggt
ggctctttagacgactccgcctcccaaaatttagcaaatattacaaaagcttgggacaat
cagaaagggatggaaggaggggatggggtggttggggagtggggaggagcggggggtcag
gatggagccgtaggcgagggtggaggacattcttcgtccagtggcgctggatccgtagcc
gggagcggaagtggacaaaaggagcgctctgcgcagcagcactccaaccagtcctccggg
gcagaagtggccttacttagcatgctgaaccgatctgacctggaccccagggttctgtcc
aacacgggctggggtcagactcagatcaagcagaatgtggcctgggacctggacacctcg
aagggtgtgggaaacggaaatgacaggaacccttcatcttcctctgcgttctcatcggca
gccataaacactaccaccaaccgcagctctaggtacccatcggagggcggttccgtttct
aacaacgcttcatctggcagcctaaactccagttcatctgcatccagggataattgggat
ggtggtacggcacagcctgccggtggtccttttatgtctagtagcaccatgaggaagcct
ggaccaccagaagacgatgcacagggcggcccaggaaagtcagccggagggtggggggag
ctgccgcctgaaaaggagggcaaaggatggaggacggatgaccaacagtggggaggtcac
agaggaggaaggaaaaactggcaagactttgaacaacagggtagtgggtggggagatgca
gctgaagataaaggaacaggggggtggaaggggtctgcaagagaagcgggtggttgggga
gaagaatgggggaagagagactccacatctagagctgggtggggagatgggaggagtaga
gtcggaagcaactccgatgaaggatcctcctggggaaacttggaagaaggaggacctcag
cgaggaggatgggggggaggaggaggaggagatgcgggtggaggcaaatcccaccaggac
tgggggaacgccaaacccaacgcagcacagataccaaacagccaagtggcaccaatgaaa
gcccaaaatcagcagcagcaatcacaggggcagcacccgccgggcggctggaacagccgg
cccagtgctggaggaggaggtggtcagctttcaaagaaccccaaccaaagtctaggctgg
acctctggtccaatccctcaaatctctgggggtgcgggcgactccctggagcccagtggc
tgggaggagccctcccctcagtccatcagtcggaaaatggaaatcgacgacggcacgtcg
gcctggggggacccgacgcgctacaacaacaagaacgtgaacctgtgggacaagaacagt
gcgacgccgggcccaaatcacggtcagcagggccccccgccaccagtccaacaacagccg
ccgaggaggcagcacagcaacaattccaaccctggcagcggcgcagtgggcatgtggggc
ggaactacacaaaatgtggatgatggtacagcagcttggggccaggcgtcggatgctgca
acaagttggggtgacccagatgattccagcaaagtttctggctggaggaacccttcacca
aaccccagtaaacctggagtaaaaactgtagaaagctggggcgggaagagtgacggctcc
atcgtggcctccaggcatccgagctgggaggaggatgaggacagcggcggcggcggagtg
tggaacagcacgggttctcagggaagcggctcttcgtttaactctggaggctggggtcag
ggtcatgctgggaagagaggaaatgtcaagactggagcagcagacagctggatgaatcca
gtttcacgccagttttccaacatgggtctcctggatgatccagggatggaaaaaaagctg
gatgtagacaagaggggaatgaatgactataatggagagatgagaaggggaggaagaagt
ggaggagggtaccgcatgcctagttccaaagacatgggccccggtgacatgggaccctat
ggtgaaaagatgggcggccatggagtatttggagggatgcctcagcctcgagggatgcac
cagcctggcatgcattccatgaacgcctccccggggttaaggagtcaagtgcctcatcag
ttcctgtctgctcaggtgccgggtcccatggtgaagcagatgccctctcctggtggcagc
gtcgggggggtgggaggtgtcggtggcgttgcaagtgtcggtggaggagtcttgacgcct
ccgatttccccgcagcagctcgcgatgctgagcaacatttacccccacgtgcagcagttc
catctggcttgtcagctcctgatacaacaacaacagcagcaacaacagcagcagcagcag
attctgcagaaccagaggaagtttccccagcctcagcctctcagacagcagacggaccca
cagcagcttgccagaatcatggctattatccagcagcagagacaacagcagcaggttgga
gttggaggagcaacacctggaggagggaaccccaagctgtctccatctcacattggagga
ggagtgtccaagcagtccatggtagaccctcttccacatgctggaatggggggtaactta
ccagatcttcatgccaaatcacaaggaatgtactctgggctcacaggtggtggtaacctt
cccactctagaactcagccccatgatggggggcatgaaagacatgagcggacaacagtcc
cgctttaaatggatgatggagggacattcccctgctccctctcctccagactcagccctt
cataagaacggccctttacccagctctataaaggtcagaggagggtctccttactcccag
tacgaaatgctgggcagtgcaggtttagggatcccacctgagggctctgcagaaagctgg
caccgaactcctggtagtaaaatgggaaacaaaccagccacttcaagctggcctccagag
ttccagcctggcgttccatggaaaggaatacagagcactggagacccagagtctgatccc
tacatgacccctggtagagtcctcggctccccagcatccccaaacctcaatgatcccgac
cacccgttactgcgagacaatatagggccaaacccctccctcaacacctcgctgccttca
cctggtgcctggccctacagtgcctcagacagccccctcagcaatgcacacagcacagga
aagtactcggagtacaagcccagctggcctccagagcccatcggacaaaacaaattatgg
aaggccaatcgcaatagctcgcagctgccgcgcccccctcctggcctaaccaatcagaag
caagcctcgccctccccgtggggaactggaggtccacggttggcccggagctggggaggg
atgaaccaagagtcaagatttgggtcaggctcagcttggagtgatggtggttcctctaga
ggcagctgctggctgttgctgagaaacctgactcctcagattgatggttccacgctgagg
actatctgtatgcagcacggccccctgctgaccttccacctgggcctaacccagggcagc
gctctggttcgatacaacagccggcaggaggcagccaaggctcagggtgctcttcacatg
tgtgttcttggaaacaccaccatcctggctgaatttgtgagcgaagaagaggttgcacgc
tattttgcacattcccaggccgaaggggccagctcaggaggagcagcgggcaacggtgcg
cccagctcctctggaactggcaccgctgtggctagcagcggggggagctcccctgggagt
gagcggcctgcggtgggcacgtctgcagccggaggcggaaacggaaacgccggaggggag
agggcgtccggctccggatggcagagcctcgacggtacgggcgcttcttcagaaacggct
ccagcccaaggaccggggcttgcgatattttcccagtggagcaccaacggggctggagaa
gggagcgtcggaggagtagagagcgggaggtctggattgtgggggggcataaacgccgga
tacccgagcagcagcctgtggggagcaccgcaaatggaggaaaggcaccaaatggacagc
tcggctggactgttgcctggcgacctgttggggggaggggccgactccatttga
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integrated database retrieval system
