Cyprinodon variegatus (sheepshead minnow): 107096724
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Entry
107096724 CDS
T06110
Name
(RefSeq) Down syndrome cell adhesion molecule homolog
KO
K06767
Down syndrome cell adhesion molecule
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107096724
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
DSCAM family
107096724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_5
Ig_4
Pur_ac_phosph_N
Sp38
C1-set
V-set_CD47
C2-set_3
Interfer-bind
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
107096724
NCBI-ProteinID:
XP_015248992
Ensembl:
ENSCVAG00000014165
LinkDB
All DBs
Position
Unknown
AA seq
1421 aa
AA seq
DB search
MWILAFIFLQSILNVFGEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHTNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVEAYVSVVSWEKDTVSLSSGQRYLITSTGA
LYIVDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPAILDGFDHREVKINH
RVELPCKASGFPTPKYRWLKDNSPLEPDSRFRQTISGLLIENAQPSDSGTYVCEVWNSYG
NAEVMGRLYVKQPLKAMVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRENLIIEGMTKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILSSFSEKVVNP
NEPLFLVCNVKGTPPPRCSWSLDDDPVIKDGHHHLGHYETHEGHVISQLNVTHTQVQDGG
LYRCTCSNSAGVVYHQARINVRGRATIRPMKNITAIVGRDAFVHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLSNVQQSDAGEYNCKVMVQPNKMESQSVHVRVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPISLGVTVDNIDFTSSLRINNLTP
DHNGNYTCIARNEAAVVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPILLNSGSRIQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKRMSCIAHGEKPIMVRWEKEERIINPETSRYVVTY
KEVADEVVSTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKTASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MVAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLEPTSPQSIKVSWKPPHKHLQNGVIRG
YQVGYREYSPGGSHQFTIISVDSTGDTTESIMLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVTKTLEDVPSRPPENVLAVAKSPEVISLSWMPLPREALNGNLQGYRVIYWANLPDGELG
EIRNVTTGQPSLELDGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAA
ASSSSAVFVSWLPPLKLNGIIRKYIVFCSNLHPMVMSEFEASPDKYFYRIPNLARNRQYS
VWVVAVTAAGHGNNSEKITVEPLPEAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPTIK
WLKGNTNGTPTPVIVDGRRSVHGNGSFLIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQ
VPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRAQQLTPKC
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatcttcctccagagcatcttaaatgttttcggcgaagatctt
cattccagcctatactttgtcaatgcatctctgcaagaggtagtatttgccagcacaacg
ggaacttcggttccctgtcccgctgggggtgctccgcccgcttcgctgcggtggtatttg
gctaccggcgaggagatctacgatgtcccgggcatccgtcacgtccacaccaatggaacc
ctccaaatcttcaacttcctgccatccagcttcagcaagctgatccatgacaacacgtac
tactgcactgccgagaacccttctggcaagatcaggagtcaggatgtccacatcaaagct
gtttcgcgggaaccctacactgtcagagtggctgaccagaaggctatgcgaggcagtgtg
gccgtcttcaagtgcattatccccgcctcggtggaggcctacgtctccgttgtatcatgg
gagaaagacacagtttcactgagctcaggacaaagatatctcatcacatctacgggagcc
ttgtacattgtggacgtcctgcctgaggatggcctaaataactaccgctgcacaacacgc
catcgctacacgggtgagacccgccagagtaacagcgcgcgtctcattgtgtcagacccc
accaatgctgagccagccattttggatggctttgaccacagagaggtaaagattaatcat
cgagtggagctcccctgtaaagcctcaggcttccctacacccaaataccgttggctgaag
gacaacagccctctggagccagacagtcgctttcgccagaccatctcagggttgctcata
gagaatgcacagcctagtgactcggggacgtatgtatgtgaagtatggaacagttatggc
aatgcagaggtcatgggacgcctgtatgttaaacagcctttgaaagcaatggtcagccct
cgaaaggttaaaggcagtgtgggtagcaaggtgtctctttcttgtagcgtgagtggttcc
gacgaatatgagctgtcatggtatcgcaacggagagatcatctaccctggaaacaatgtt
cgcttcacagggcttaaccgggagaacctaatcattgagggaatgacaaaaagtgatggc
ggagcttatcagtgctttgccaggaagggcaagatgtctgcacaagactttgtgcaggtt
atcctcgaagacgggaccccaaaaatcttgtcctctttcagtgagaaggtggtgaacccc
aacgagcccctgttcctggtctgcaacgtgaagggaacgccgcctcccaggtgcagctgg
tcgctggacgacgaccccgtcatcaaagatggccaccaccacctgggccattatgagacc
catgaaggccacgtaatcagccagctcaacgtgacccacacccaggtgcaggacggcggg
ttgtatcggtgcacgtgcagcaactcggccggggtcgtgtaccaccaggctcgaataaac
gtaagaggccgtgccaccatccgtcctatgaaaaacatcacagccattgtagggcgggat
gcctttgttcactgccgtgtgattggctatccttactactccataaagtggtacaaaaac
tctgccctgctcccgtttaatcaccgacaacgagcttttgagaataatggtactttgaag
ctgagcaacgtgcagcagtcagatgcgggagagtacaactgcaaggtgatggtgcagccc
aacaagatggaatcccagagtgtccacgtccgagtgagagtccctccttacatccagccc
tttgagtttcagcgtttcactatcggtcagcgtgtgttcataccttgcgtggtcatgtcg
ggcgaccggcctttggacatcacctggcagaaggacggacggcctattcctatcagcttg
ggcgtgacagtcgacaatatcgactttaccagctcgctgcggataaacaacctgacacct
gaccacaacggcaactacacctgcatcgcccgcaatgaggccgctgttgtggagcaccag
agtcagctcattgttcgagttcctcctcagtttgtggttcagcctgaggatcaagatggg
atctatgggaaaactgtgacccttaactgctccgctgaaggctatccaccacccactatt
gtttgggagcactccaaaggtgccggagtcccccagtttcagcccatcctgctgaacagc
ggctctcgaatccagctgctgagcaacggttcgctgcttatcaaacacgtgctggaggat
gacagcggcttctacctgtgtaaggtcagcaacgacgttggagctgatgtcagcaagtcc
atgtacctcactgtcaaaataccagccatgatcacctcctacccaaacaccactctggcc
acgcaaggtgaggagaagaggatgagctgcattgctcacggggagaaacccatcatggtt
cgctgggagaaagaggagcgcatcatcaaccccgaaaccagccgatacgtggttacttac
aaggaagtggctgacgaagtcgtctcaacactagtgatcatgccaactgttcgcgaggac
tcagggttcttctcctgtcatgccatcaactcctttggtgaggacagaggcatcatacag
ctgactgtgcaagaaccaccagatcctcccgaggtggagatccgggaggtcaaagacaga
actatagctctccgctggactatggggtttgacggcaacagtcctatcacaggatacgat
attgagtgcaagaacaaaacagcttcatggttgtctgcgcaggtaaccaaagatgtgtca
ccgcagcttaaccaagccactattattgacctccatccttcttcaacgtataacatccgt
atggttgccaagaacattattggaaacagcaaccccagcaatgagctcaccatcactact
gatgaagcagctcctgatggccccccacaagatgtcactctggagccaacctccccacag
agcatcaaagtttcctggaagcctccccataaacatttgcaaaacggtgtgatccgcggc
taccaggtgggctacagggagtacagtcctggagggagtcaccagtttactattatcagt
gtggattcaacaggagacaccaccgagagcatcatgctggacaatctgaagaagttcact
cagtacagcgtggttgttcaggctgcaaacagagctggaacaggaccttcttcacagcag
gtggtcaccaagaccctggaggatgtgccctcccgacctcctgaaaatgtgctggcagta
gccaaatctccagaggtgatttccctctcctggatgcctctaccaagagaagctctcaat
ggaaacctgcagggctacagagtaatctactgggcaaatctgcctgatggagaacttggt
gaaatccggaatgtgacaactggtcagccttctctggagctggatggtttagagaagtac
accaactacagcatccaggtcttagctttcactaatgctggagatggagtccgcagtgag
cagatctatgttcgcaccaaagaggatgttcctggtccaccagcaggagtaaaggctgca
gcctctagcagctctgctgtgtttgtctcctggctgcctccgcttaaacttaatggcatc
atcagaaaatacatcgtcttctgctctaacttgcatcccatggtgatgagtgagtttgag
gcatctcccgataaatatttttacaggatcccaaatttggctcgaaacagacagtacagt
gtctgggtggtggcagtgacggctgcaggacatggaaacaatagtgagaagatcaccgtg
gagcctttacccgaagctccagctagaatcctgacatttaatggaacagtcactactccc
tggatgaaggacattgttttaccatgcaaagctgttggagatcctcctcccaccattaaa
tggctcaagggaaacacaaatgggacacctacgcctgtaattgtggatggtcgtcgtagc
gtccatggcaacgggagcttcctaatccgtacagtaaaagcagaggactctgggaactac
agctgtgtggccagcaacaactgggggtctgatgagatcaccctgaacctgcaggttcaa
gtaccccctgaccagccccgtctcacagttaccaagactaccaccacgtcaatcacattg
tcatggatacccggagacaacggagggagctccatcagagcacaacagttaactcctaaa
tgctag
DBGET
integrated database retrieval system
