Cyprinodon variegatus (sheepshead minnow): 107096727
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Entry
107096727 CDS
T06110
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107096727
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
107096727
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
GAS
Motif
Other DBs
NCBI-GeneID:
107096727
NCBI-ProteinID:
XP_015248991
Ensembl:
ENSCVAG00000008202
UniProt:
A0A3Q2CML7
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MERFQSSMRKRLYSLPQNIAQRATVTEGEGDSGDKDTKRKSIRLKHLSSLSPASSCRSIE
EAGSEDLERDASALKSNLNGDCRFFRSSISSITGRHPPDSDPAEQRRLLPETEAGASESS
PGEPGPGAPERAPSQPPVFDPSAFIKLEGSDQIIPEDERLYQAGFMHRQFGAMLQPGVNK
FSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFK
DEHTPPWIVFNVVSDTFFLIDLVLNFRTGIVKEDNTEIILDPQQIKIKYLKSWFVVDFVS
SIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEVFHMT
YDLASAMVRIMNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVTRNKMVNDTWGQQYSYA
LFKAMSHMLCIGYGLYPPIGMGDVWLTILSMIVGATCFAMFVGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILEELNEPLREEIINFNCRK
LVASMPLFAHADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVITKSSS
DTKLTDGSYFGEICLLTRGRRTASVRADNYCRLYSLSVDNFNEVLEEYPMMRRAFEAVAL
DRLDRIGKRNSILQHKVQHHQSSGTLNLHETEIIQRIVQHDRDMAHCTQLIQSSTGHSLN
PPAAPPSPTPLIWTPLLQAPLQAAAATTPLALALAHHAQLPPILFHSPLVPGSGSMKGQS
HSRRVQMAGNTSSSYGSVPSSPVCAATSRSVVETPSLGFSLPQHHSTGVFPPTMMSQPIF
TSSLQPVTPLPAPQPMYQPPHCGMTPIFPFNPATVSYTCSAQLHPQPFLGAMTNPPQPLG
LLKQGAPSKLAGRFPAPTIGPLICSSVNPILSQLQQTCHPSSLNKETSTPSNINLPRFPI
ITSRQVPVGISAPSSAGGTGTAASLAQHTLAGLQSVFLPQVLTEHSALASLAQYGSAEAS
PCYTPPLTQSPVMARTVHHSELPITSSFHSSLPLQSSRPSRGGSPQKERTESPVDLFAQE
IKTISGSQSYLHQERPSVMSGSSDGAARSHHSPLAVNKPYTPIPGQGIPVSRTPSGPEPR
KLSAADQSPSQESDSKQKQSKLPSNL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggttccagtcctccatgcgcaaacggctctacagcttgccgcaaaacattgcg
caaagagcaactgtgactgaaggcgaaggcgacagcggcgacaaggacactaaaaggaaa
agtattcggctaaaacatttgtcctctctgtctcccgcaagcagctgcaggagcatcgag
gaggccgggagcgaggacttggagagggacgcgtccgcgctgaaatccaacttgaacggg
gactgccgcttcttccggagcagcatctcgtccatcaccgggaggcatcctccggactcg
gatcccgcggagcagcggcgcctcctgcccgaaacggaagccggggcgagtgagagttca
cctggggagcctggccccggggccccggagcgggcaccgagtcagccgcccgtcttcgac
ccgtcagctttcatcaagttggagggatcggatcagataatacccgaagatgagcgactg
tatcaggccggcttcatgcaccgacagttcggggcaatgctccagcccggagtcaacaag
ttctccctgcggatgctgggcagtgagagggccgtggagcacgagagggagcgcgtgaag
tctgcaggtttctggataatccacccatacagtgattttaggttttactgggacctgacc
atgctgctgctgatggtgggaaacctcatcatcatccctgtgggcatcacctttttcaag
gatgagcacacaccaccctggattgtcttcaatgttgtgtcggacaccttctttctcata
gacctggtcctcaactttcgcactggcatcgtcaaggaggacaacacggagataatcctg
gatccacagcagatcaagatcaagtacctgaagagttggtttgtggtggactttgtctcc
tctatacccgtggactacatctttctcattgtggaaactcgcatcgactcagacttctac
aagacggcccgggcccttaggatcgtccggttcaccaagatcctcagtctgctgcggctg
ctgcgcctctccagactcattcgctacatccaccagtgggaagaggtgtttcacatgacg
tatgatctggccagtgctatggtacgtatcatgaacctgattggcatgatgctgctgctc
tgccactgggatggatgtctccagtttctggtgccgatgctgcaggactttcctccggac
tgctgggtcactcggaataagatggtgaacgacacctggggtcagcagtattcctatgcc
ttgttcaaagccatgagtcacatgctttgcattgggtacggcctgtacccacccatcggc
atgggagacgtctggctcaccatcctcagcatgatcgtgggcgctacctgctttgccatg
tttgtggggcatgccacagctctcattcagtccttggactcctcaaggagacagtaccaa
gaaaagtataaacaagtggagcagtacatgtccttccacaaactccccgctgatatgagg
cagaggatccatgattattacgagcaccgttatcaggggaagatgttcgatgaggagagc
atcctggaggagctgaacgagccgctgcgagaggagatcatcaacttcaactgtcgcaaa
ctggtggcgtccatgcctctgttcgcccacgccgaccccaactttgtcacctccatgctc
accaagctgcgcttcgaggtcttccagccgggcgactacatcatcagggaggggaccatc
gggaagaaaatgtacttcatccagcacggcgtggtcagcgtcattacaaaaagcagctca
gacaccaagctgaccgacggctcttactttggagagatctgcttgttgactcgaggcaga
aggaccgccagcgtgagagcagataactactgccggctgtactctctgtccgtagacaac
ttcaatgaggtgctggaggagtatcccatgatgaggagggcctttgaggcagttgccctc
gaccgcctggaccgtatcggaaagaggaactccattttacagcataaagtccagcatcac
cagagttccggcacattaaaccttcatgaaacagaaatcatccaaagaatcgtccagcat
gaccgcgacatggcgcactgtacacagttgatccaaagcagcactggtcacagtttaaac
ccccctgctgctcccccatcacccacgcctctcatctggaccccactgcttcaggcgccg
ttgcaggctgcagctgccaccacaccactggctctggccttggcccaccacgcccaactg
cctccaatcctgttccacagtcctctggttcctgggtctggctccatgaagggccagagc
cattcaaggagagtgcagatggcaggaaacacctcaagtagctatggttcagttcctagt
tcccccgtctgcgctgctacatctagatctgtggttgagactccctcgttggggttctct
ttgccccagcatcactctactggagtttttccccccacaatgatgtcgcagcccatcttc
acaagcagcctgcagccagtgaccccactgcccgctcctcagcctatgtatcagcctcct
cactgcggcatgaccccaattttccccttcaatccggccactgtctcctacacctgctct
gcacagctccaccctcagccctttcttggtgctatgaccaatccacctcagcctttaggt
ttacttaaacagggggcaccaagtaagctggcgggaagatttccggccccgaccatcggt
cctctgatctgcagctcagtaaaccccattctgagccagctgcagcagacctgtcacccc
tccagcctcaacaaagagaccagcacgcccagcaacatcaacctcccacgttttcccatc
ataaccagcaggcaagtccccgtgggaataagtgcgccatcatcagcaggtggaacgggg
accgccgcctctctagcgcagcacaccctggcagggctacagtcagttttcctcccacag
gttctcaccgagcactcggccctcgcctccctggcccagtacgggtcggcagaggcctcg
ccttgctacaccccccctctcacgcagagccctgtgatggcacggacggttcaccacagt
gagctgcccatcacctccagctttcacagctccctgccacttcagagctcacgtccatcc
agggggggctcccctcagaaagagagaacagagtcacctgtggatctcttcgcccaggaa
ataaagacaatctcaggctctcaaagctatttacaccaggaaaggccttcggtcatgagc
ggctcctcagatggggcagcaaggagccaccattctcccttggctgtcaataaaccctac
acccccatcccaggtcagggcattcctgtcagtcggacaccatcagggcctgaaccgcgg
aagctgtcggccgctgatcagtctccctctcaagagtcagacagtaaacagaaacagtcc
aaacttccctccaacttgtga
DBGET
integrated database retrieval system
