Cyprinodon variegatus (sheepshead minnow): 107096795
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Entry
107096795 CDS
T06110
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04814
Motor proteins
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107096795
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107096795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107096795
03036 Chromosome and associated proteins [BR:
cvg03036
]
107096795
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107096795
Membrane trafficking [BR:
cvg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
107096795
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
107096795
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
107096795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
TolA_bind_tri
Gemin7
DUF7259
Motif
Other DBs
NCBI-GeneID:
107096795
NCBI-ProteinID:
XP_015249090
Ensembl:
ENSCVAG00000006551
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MSQTRRSTYSRTTSSGSSRMSSDGGGRPAKVGSLVEVIGKGQRGTVAYIGTTLFASGKWV
GVILDEPKGKNDGTVQGKRYFTCEENHGIFVRQSQIQLVDDGADTSPETPEPTVGKVPKR
EIVEMSKSAKLRGLKPRKVLHVSLNSTPTTRKTTARRPKQPSRPAGGGGKGAASGSASAS
AGEMSSSEPSTPAQTPLAAPVIPTLHSPGNPPPPVPSKEEEALRAQVKDLDEKLETLKMK
RTEDKAKLKELEKHKIQLEQLQEWKTKMQEQQAELQKQLKEAKREAKEAMEAKERYMEEM
SDTADAIEMATLDKEMAEERAESLQLEVDSLKERVEELTMDLEILKHEIEEKGSDGAASS
YHVKQLEEQNGRLKEALVRMRDLSASEKQEHVKLQKQMEKKNMELDSLRGQKEKLQEEMT
AAEKTIDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQEN
ARETELELREMLDLGAARVREAEKRVEAAQETVADYEQTIKKYRELTAHLQEVNRELTSQ
QEASAELQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVAQANRHVSLLTSFMPESFL
RHGGDHDCILVLLLIPRLIHKAELISKQAQEKFDLNENCVERVGLKGAVGEQLSFAGGLV
YSLSLLQATLHKYEQALSQCSVDVYKKVGSLYPEMSVHERSLDSLIDLLHKDQLDETVNV
EPLTKAIKYYQHLYSIHLADQNEECTMQLADHIRFTQSALDCMAVEVGRLRAFLHAGQEK
ADLAVLLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALNFGQQVSDTLSDCRKHLTWV
VAVLQEVAAAGAQMMSPLSEQDGLAAVKLEDVAFKAAEQIYGSQGANPYECLRQSCSIVI
ATMNKMATAMQEGEYDSDKPQSKNPPPVDVRAGALRAEITDAEGLGLKLEDRETVIKELK
KSLKIKGEELSEANIRLSLLEKKLDSSSKDADERVEKIQTRLDEAQTLLKKKEKEFEETM
DALQADIDQLESEKMELKQRISSQSKMSSDGLRGSGPSGIASIVSGISGEEQKANMMAGV
GSGSGAQVIDSPLLTKQIEAQRLCIKHLKNENNRLKAEKMRTQLASLPSLNVTKLPSKEG
RPEVLSSALYRKTDQLLETLLQMSANVKVVDITGKSPVTPSAQLLEQTARLQSLRETLDK
LKGEVAEHVVNLQPGARVSSDFATFPSTSFVKATEEKHSDTVLVGRVMVPCPRGQERVHR
LVLSQSQLQRVHSLLQT
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagactagaagaagcacatatagccggaccaccagcagtggcagcagcaggatg
agctctgatggaggagggaggcccgctaaagtgggctccctggtggaggttatcggcaag
gggcagcggggcacggtggcctacatcggaaccacgctgttcgcctccggaaagtgggtg
ggcgtcatcctggatgaacccaagggcaagaatgacggaacggtgcagggcaagcggtac
tttacttgtgaggagaaccacggcatcttcgtcagacaatcacagatccagttggtggac
gatggagcggacacatctccagagacacctgagccaaccgttggcaaggtccccaaacga
gagatcgtggagatgtccaagtctgccaaactgcgaggactgaagcccagaaaggtgctg
catgtttccctaaactcgacccctacaacccggaagaccacggccagaaggcccaagcaa
cccagccggcctgcaggtggcggtgggaagggggccgcatccggctcagcatcggcgtcc
gctggcgagatgagcagcagcgagcccagcacgccagctcagacgcctctggcagctccg
gtcatccctaccctccactcaccagggaacccgccgcctcccgttcccagcaaggaggag
gaggccctgcgtgctcaggtgaaggatctggacgagaagcttgagacgctgaagatgaaa
cgaacagaggacaaagccaaactaaaggagctggagaagcacaagatccagctggagcag
ctgcaggagtggaagaccaagatgcaggagcagcaggcagagctgcagaagcagctcaag
gaggcaaaaagggaggctaaagaagccatggaggcaaaggagcggtacatggaggagatg
tcggacacggccgacgccatcgagatggcgactctggataaggagatggcagaggagcga
gccgagtccttgcagctggaggtcgactccctgaaggagagagtggaggagctcaccatg
gacctggagatcctcaagcatgagattgaagaaaaaggttcagacggcgctgcctccagt
tatcatgtgaaacagctggaagagcagaacggccggctaaaggaagctttggtccggatg
cgagacctgtctgcatcagagaagcaggaacatgtaaagctgcagaagcagatggagaaa
aaaaacatggagcttgattctctgagggggcagaaggaaaaactgcaggaagagatgaca
gcagcagagaagactattgatgagctgaaggaacaggtggatgcagctttgggggcggag
gagatggtggagactctgacagagagaaacctggatctggaggagaaagtccgagagctg
agagagacggtcacagacctggaagctataaatgagatgaacgatgagctgcaggagaac
gctagagaaacagagctggagctcagagagatgctggacctgggcgcagccagagtccgt
gaggctgagaaacgagtcgaggcggcgcaggagactgtggcagattacgagcagaccatc
aagaagtacagagagctgacagctcacctgcaggaggtgaacagagagcttaccagccaa
caggaggcctcagcagagcttcagcagcagccgccagcagaaatgtttgatttcaagatt
aagttcgcagaaacaaaagcttatgccaaggccattgagatggagctgaggaagatggag
gtggctcaggccaacaggcacgtgtctcttctgacttcctttatgcctgaatccttcctt
cgtcatggtggagaccatgactgcatcctggtcctgctgctcatcccaagactcatccac
aaggctgagctgataagcaaacaggcgcaggagaagtttgacctgaatgaaaactgtgtg
gagcgagtcggcctgaagggagcagtcggtgagcagctgagcttcgccggcggcctcgtc
tactccctcagtctgctgcaagctactctccacaaatatgaacaagctttgtctcagtgc
agtgtagatgtctacaagaaggtgggctctctgtacccggagatgagcgttcatgaacga
tctctggattccctcatcgaccttctgcacaaagaccagctggacgagacggtcaatgtg
gaaccactcaccaaggccatcaaatactatcagcatctgtacagcatccatctggcagat
cagaatgaggagtgcactatgcagctggctgatcacatcagatttacccagagtgccttg
gactgcatggcggtagaggttggtcggctgcgggcgttcctgcatgcaggtcaggagaag
gccgacctcgccgtgctgctgaaggacttggagacatcctgcagcgacatcaggcagttc
tgtaagaagattcgccgcagaatgcccggaacagatgcacccggtatccctgccgcgctt
aactttggacaacaggtgtccgacacactctccgactgcaggaaacacctgacatgggtg
gttgcagtgctgcaggaagtagctgccgctggagctcagatgatgtctcctcttagcgaa
caggatggcctggcagcagttaaactggaggatgtggcgttcaaggctgcagaacagatc
tatggatctcagggtgctaatccctacgagtgtctgcgacaatcctgtagcattgtcata
gcaaccatgaataaaatggctactgccatgcaggagggagaatatgactcagacaagccc
caaagcaagaaccccccacccgtggatgtacgtgctggagcacttcgagcagaaatcaca
gatgcagaaggtctgggcttgaagctggaggacagagagacggttattaaagagctaaag
aagtctctaaagatcaagggagaagagctgagtgaggcaaacatccgtctcagcctgctg
gaaaagaagctggacagctcgtccaaagacgcagacgaacgcgtggagaagatccagact
cgtctggacgaggcgcagacactgctgaagaagaaggagaaggagtttgaggagaccatg
gatgctctgcaggcggacatcgaccagctcgagtccgagaagatggaactgaagcagcga
atcagcagtcagtcaaagatgagctctgacggactgagggggagcggcccgtctggaatc
gcttcgattgtctcaggaatatctggagaagaacaaaaagccaacatgatggcaggagtc
ggctccggttccggcgctcaggtgatcgactctcctctgttgacgaagcaaattgaagct
cagaggctctgcatcaaacacctgaagaacgagaacaacaggctgaaggctgagaagatg
cgtactcagctcgcctctctgccgtcgctcaacgtgaccaaacttccttccaaggaagga
cgacctgaagtgctctctagtgccctctaccgcaagaccgaccagctcctggagaccttg
ctccagatgagtgcaaatgtcaaggtggtggatatcactgggaagtcgccagtgacccct
agtgctcagctcctggaacagacagcacgtcttcagtccctgagagagactctggacaaa
ctgaagggtgaggtagcagagcatgtcgtcaacctgcagcctggagctagagtctcatca
gactttgcaacgttcccttcaacctcctttgttaaggcaaccgaagagaaacactcggac
acagtgttggtcggtcgagttatggtgccgtgtcctcggggtcaggagcgggtccaccgt
ctggttctatcccaatcccagctgcagagagtccacagtctcctgcagacctag
DBGET
integrated database retrieval system
