Cyprinodon variegatus (sheepshead minnow): 107096801
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Entry
107096801 CDS
T06110
Symbol
capn3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107096801 (capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107096801 (capn3)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
107096801 (capn3)
Peptidases and inhibitors [BR:
cvg01002
]
Cysteine peptidases
Family C2: calpain family
107096801 (capn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
DUF3990
Motif
Other DBs
NCBI-GeneID:
107096801
NCBI-ProteinID:
XP_015249107
Ensembl:
ENSCVAG00000006244
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPIRFNGQDYNTLRQEYLQRKSLFEDDAFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGELGDCWLLAAIACLT
LNEKLLYRVIPQEQSFSENYAGIFHFQFWRYGDWVDVVIDDRVPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECRPSQHKDHKVRLVRLRNPWGQVE
WNGPWSDNSKEWATLSKDEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPDDNEDVCTFVVAL
MQKNKRRERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARSKSYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFILRVFSEKKNTSEEIENRIEADHPVPAPASAGEES
EEDHQFRTIFQEIAGDEMEITANELRNVLNRVITKHKDLNTEGFSLESCRSMIALMDVSF
MDGTGRLNLQEFRHLWNKIKQWQGIFKHYNADQSGSINSYEMRNAVNDAVMCLMSCPGFR
LNNQLYDIITMRYANENMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQL
TMYA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccatacacgccatctggctttttctgtgaccggttgatccgggaacgagaaaggagg
gacggggaagggtccttgaacaagcccatccgctttaacggccaggactacaacacgctg
aggcaggagtaccttcagaggaaatctctgtttgaggatgatgctttccccgccacagtg
gagtctctgggcttcaaagagcttgggcacaagtctaacaaagtcaagaacatcgtctgg
aaaaggcccaaggaaatatgtgaaaaccctcagttcattgtcggaggagcgagtaggaca
gacatctgtcagggagagctaggtgattgctggttgttagctgctattgcttgtctcacc
ttgaatgagaaactcctctacagagtgattcctcaggagcaaagcttctctgagaactat
gctggcatcttccatttccagttctggcgttatggtgactgggtcgacgtcgtcattgac
gaccgtgtcccaacattcaataaccagctggtcttcactaagtctgctgagagaaatgag
ttttggagtgccctgctggagaaagcctacgccaagcttcacggctcttacgaggctctg
aaaggtgggaacaccacggaagctatggaggatttcactggtggcgtcactgagttttac
gagatgaaggaagctcccaaagaactctataagatcatgaagaaagccttggagagaggt
tcgctcatgggctgctctattgattccctggttcctgctcgctttgaaactcgcaccgtg
actggacttgtgaagggccacgcctactcggtgacagctgtggaggagtgtagaccctct
cagcataaggaccataaagttcgccttgtgcgcctcaggaacccatggggtcaggtggag
tggaacggaccctggagtgacaactccaaagaatgggccacactctctaaggatgagaaa
gagaaactgcagcaccaaagcgcagaggatggagagttctggatgtcatttgaagatttc
aagaagaactacactaaaattgagatctgtaacctaacacctgatgcccttgaggacgat
aaaatccacaagtggacagtttctgtgaacgagggccgctgggtgagaggctgctctgct
ggaggctgcaggaactatccagacactttctggaccaaccctcaataccgacttcgtctg
ctggaggaggacgacgatccggatgacaatgaggacgtctgtacctttgtggtggccctg
atgcagaagaacaaacgaagagagcggaaaatgggggccaacctgtttaccattggattt
gccatttatgaggtgccgaaggagatgcatggaaacaagcagcacatgcagaaggatttc
ttcttgtttaactcctccaaggcccgctccaagtcctacatcaacctccgggaggtgaca
cagcgctttcgcctgagccctggcgagtacgtcatcgttccttccacgtacgagccacat
caggagggagagttcattctgcgagtcttctctgaaaagaagaacacctcagaggagata
gagaataggatcgaggccgaccatcctgtgccggctccagcctcagcgggggaagagagc
gaggaggaccaccagtttcgaactatttttcaggagatagccggtgatgaaatggaaatc
acagccaatgaactgaggaatgttctcaatagggtgatcaccaagcataaagacctgaac
actgagggctttagcctggagagctgcaggagcatgatcgctctgatggacgtatccttt
atggatgggacgggcagactcaatctgcaggagttcagacatctgtggaataagatcaag
cagtggcagggaatctttaaacattataatgcagatcagtccggcagcatcaatagttac
gagatgaggaacgccgtcaatgatgcagtcatgtgtcttatgtcctgtccaggcttccgt
ctcaacaatcagctgtatgacatcatcacgatgcgctacgcaaacgagaacatgaacatc
gactttgacagcttcatcagctgtctggtccggcttgaagccatgttcagggccttccaa
gcatttgaccaggatggcgatggaaccatcagactcagcgtcctggagtggctccagctg
accatgtacgcctag
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integrated database retrieval system
