Cyprinodon variegatus (sheepshead minnow): 107096811
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Entry
107096811 CDS
T06110
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107096811
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107096811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
107096811
NCBI-ProteinID:
XP_015249122
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MGLDVGMAASFGLGSPILTFVFSHYLYLHCWVWAAMDTCYDENGVPSRCMPKFENIAFNR
TVMASNVCGSPPEDYCMQTGSTRLCHHCDASDLELNHNASLLTDFNRNEEPTWWQSQSMY
YGIQYPNSINLTLQLGKAFEITYIRLKFYTSRPESFAIYKRTEKDGPWLPYQYYSASCEK
TYRRFTKGYIRPGDDERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSLALQEWV
TATDLLISLDRLNTFGDEFFKDPKVLRSYFYAISDFSVGGRCKCNGHASECVEGEQGGLV
CACQHHTVGADCQRCHPFYQDRPWARATGDSANECLKCNCSGRSNECVFDMELYRSTGSG
GRCVSCRDNTDGAHCERCKENHYRKVPEEPCLPCHCNINGSVSLQCDAEGRCPCRLGVTG
EKCDTCQAGFQSLGPGGCRPCNCDPSGSEDHCSPLDGHCFCKQNVEGQSCNRCKPGFFNM
QREHPAGCQPCFCFGHSLACYSSSHYRATVITSDFTEDRDGWWGEFSGGLEYPLLWKEGE
VYLLPLNEEDTGFYRAPEKFLGHKVNSYGQLLSITFTSETSDLLPDRVTLLLQGSGLTVS
ADLSYPPQPDHDYSLTPRRSFIVRLHEYETRFKPHLSAFEFQRLLYNLTVLKISNAGGHN
YTSQLAGVTLTSASIFSSPASAPAPWVETCSCPQGFAGEFCERCAPGFTREDPSRGPFST
CVPCNCHQHGTCHPETGMCECLDFTTGTTCERCLDGYYGNALTGTPGDCQACPCPGRSSC
ALIAETGQVVCTNCPAGQTGMRCQMCEDGYYGDPLGTSGTARPCERCTCNGNVDFNDVGV
CDPFTGRCLKCLGHTEGDQCQRCKRGFYGDALSQTAREKCRPCSCNAAGTSGPVDECHPM
TGYCRCLSHVTGRDCSHCEIGFFNLQPGIGCERCKCNPVGSLSMACHPITGECVCRAGVE
GNLCGSCRVGFFGFSSRGCIACNCDPMGSASMQCHTDGTCQCRQGFVGHKCNKCEMNYFH
NRATHQCEECPVCYGLVKKQAEKLQAHLQNLDRLLAHFDCRGRFGKRYHPVKYSTPQLYE
GEHQRDDAFPNALEDFLAFQEAREAFIKQFSLLEASAGALSAQLHGITIGLNCSISMTEE
EDGEEGKDGRKDAKRRGACQIFTEILLMMRTSRDQLKQATLDLDNVIISFEAMSAPNKWS
IMVNDSQVLMKSHRETADHIEAIASRAVRESKQTFSLLMDLLQDNSTEEYIRNLMEQINQ
MQQQKENLTVLLNTTVAELLAVEKEDAVSKLSLGNITSSLHQLTLRTEPDMEQTEFNQTH
LENHTAQLSEELLQQTEELDQQIGAKELLISNISRVAESVKQTVKKHFEKEDKIKMLQGR
AQAANTAALTSVVKGKEVESEAITLHKKIENMVEEWPHQQLQTKAALKKQRPLEEKVLSE
VQKKVKQIEKMLEPAKENASLASNTTQEAGQMAYDVAKGSKAILTQAKHTRTTASHLNSH
MDLALKQLSEQELLIEKANSMIPTEPEVSLTSIKHDMEAAKQQLEAYSVTLSELISKIDG
SVPLERFDRILNETERRLSMLRGSVESPALGSKIQKLHSAAKDQQSRLSLIEQDIQEIRV
ERDSLRDIASNLPQSCPQASAEGKA
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggatgtaggcatggctgcatcctttggtttaggctctcctatcctgactttt
gtcttttcccattacctgtacctccattgctgggtttgggcagcaatggacacttgctat
gatgagaacggagtccctagccgttgcatgcccaagtttgagaacattgccttcaatcgc
actgtgatggcatcaaatgtatgtggttccccgcctgaggattactgcatgcaaactggc
tcaacccgtttgtgtcaccactgtgacgcatcagaccttgagctgaaccacaatgccagc
cttctgacggactttaacaggaatgaggagcccacctggtggcaaagtcagtccatgtac
tatggcatccagtaccccaattctatcaaccttaccctccaacttggcaaagcttttgag
ataacatacatccggttaaagttctacaccagtcgaccagagagcttcgccatttacaaa
cgcacagagaaggatgggccttggttaccttatcagtattacagtgcttcatgtgagaag
acatacagaaggttcaccaaaggctacattcgccctggagatgatgaaaggactgcgtta
tgtacagatgagttcagtgatatttcccctcttactggaggaaatgtggctttttctacc
ctggaaggccggcccagtgcctacaactttgaccaaagcctggcactccaggaatgggtg
acagccactgacctgctcatctctttggacagactgaatacgtttggagacgagtttttt
aaggatcctaaagtgctgcgctcgtatttttatgccatctcagatttctccgtgggtggg
agatgtaagtgcaacggccatgccagcgagtgcgttgagggggaacagggtggcctagtg
tgtgcctgccaacatcacacagttggagccgactgccagagatgtcaccccttttaccag
gacagaccttgggccagggccactggggattccgccaacgagtgtttgaagtgcaactgc
agtgggagatcaaacgagtgcgtgtttgacatggagctgtataggagcactggcagtggg
gggcgctgtgtgagctgcagagacaacactgatggggcccactgtgaacgctgcaaggaa
aaccactacaggaaagttccagaagaaccttgcctaccctgtcactgcaatatcaatggc
tcagtgagtttgcagtgtgatgcagaaggaaggtgtccatgcagacttggtgtgacagga
gagaagtgtgacacttgtcaggctggcttccaatcactgggtcctgggggttgcaggccg
tgtaactgtgaccccagcgggagtgaggatcactgctcccctctggatgggcattgcttc
tgcaaacagaatgtggaggggcagagctgtaataggtgcaagccaggatttttcaatatg
cagagagaacacccagcaggctgccagccgtgtttctgctttggtcactcccttgcctgc
tactcatccagtcactacagagccacggttattacatcagactttactgaagaccgtgat
ggttggtggggagagttctccggaggcctggagtaccccctgctgtggaaggaaggtgaa
gtctacctgctgcctcttaatgaggaagacactggtttctacagagcccctgagaaattc
ctgggtcacaaagtcaacagctatggccaactcctctccatcaccttcacctctgaaacc
tcagatctgcttcctgaccgcgtcacgctgcttctccaaggatctggactcaccgtgtca
gcagacctttcctacccgccccagcccgaccacgactacagcctcaccccgcggcgctcc
tttattgtcaggctccatgaatatgagacgagattcaagcctcatctgtctgccttcgag
ttccaacggctcctttacaatctaaccgttttgaaaatcagcaatgcgggaggacacaac
tacacatcacagcttgcgggggtaaccctgacctccgcttccatcttctccagtccagcc
agtgctccagctccgtgggtggaaacttgctcatgtcctcagggctttgcaggcgaattt
tgtgagcgttgcgcccctggattcaccagggaagacccaagcagagggcctttctcaaca
tgtgtgccttgcaactgccatcagcatggaacctgtcatccagaaacagggatgtgtgag
tgcttagacttcaccaccggtacaacgtgtgagcgctgcctggatggctactatggcaac
gccttgactggcacacctggtgattgtcaggcctgcccttgcccaggccgcagcagctgt
gccctcatcgcagagaccggacaggtggtctgcaccaactgccctgcaggacagacaggt
atgcgctgtcagatgtgtgaggatggctactatggcgaccccctgggaacgtccgggacg
gcccgcccctgcgaaaggtgcacctgcaatggaaacgtggatttcaatgatgtgggagtt
tgtgaccctttcactgggcgatgcctaaagtgcctcgggcacacagagggcgaccagtgc
cagcgctgtaagcggggcttttatggcgatgccctgagccaaacagccagagagaaatgc
aggccgtgtagctgcaatgcagcaggtacctctgggcctgttgatgaatgccaccctatg
actggatattgtagatgtctcagtcatgtgaccgggcgggattgcagtcactgtgaaatc
ggcttcttcaaccttcaacctggcattggatgtgaaaggtgtaaatgtaacccagtgggc
tctctgtcgatggcctgccatccgatcacaggagagtgtgtatgtcgtgcaggagtggag
gggaacctgtgtggctcttgtcgtgtgggcttttttggattctcctcacgaggctgtata
gcctgtaactgtgacccaatgggctccgcttccatgcagtgccacactgatggcacctgt
cagtgccgccagggttttgtgggtcacaaatgcaacaaatgtgagatgaattacttccat
aaccgagccactcaccagtgtgaggaatgtccagtttgctatggccttgtcaaaaaacag
gccgaaaagcttcaggctcatctgcagaacctggacaggctcctggctcactttgattgc
cgaggtagatttgggaagcggtaccacccagtgaagtacagcacgccgcagctttatgag
ggggaacaccagagggatgatgcttttccaaacgcactagaggattttctggccttccaa
gaggcacgggaggccttcataaaacaattttccttgctggaagcttcagcgggcgcactt
tcagctcagctgcatggcattacaattggtttgaactgcagcatcagcatgacggaagaa
gaggatggggaagaagggaaagatgggagaaaggatgcgaaacgtagaggagcgtgtcaa
atcttcacagaaatcctgctgatgatgagaacatccagggatcagctgaagcaggcgacg
ctggacctggacaacgtgatcatttcttttgaagccatgtcagcgcctaacaaatggagc
ataatggtcaatgactcccaggtcctaatgaaaagtcacagagaaacggcggaccacatt
gaagccatagccagcagggcggtacgcgagtcaaagcagactttcagcctgctgatggat
ctactgcaggacaactctacagaggagtacattaggaatctgatggagcaaataaatcaa
atgcagcagcagaaggaaaacctcactgtgctgctgaatactaccgtagctgaacttttg
gctgtggagaaagaagatgccgtttccaagctttctttgggcaacatcacatcatcctta
catcagctgactttgagaacagaaccagacatggagcaaactgagtttaaccaaacacat
ctggagaatcacactgcacagttaagtgaggaactactgcaacagacagaagagctggac
caacaaattggggccaaggaacttctcatcagtaacatcagcagggtggctgaatcagta
aaacagactgtcaagaaacactttgaaaaagaagacaagataaaaatgctacagggacgt
gctcaggcagcaaacactgcggctttaacatctgtggtgaaggggaaagaagtggagtcc
gaggccatcaccttgcataagaaaatagaaaacatggtggaagagtggccccatcagcaa
ttacagaccaaggctgcattgaagaagcaaagaccgttggaagaaaaggtcctgtctgag
gtccagaagaaggtcaaacaaattgagaagatgctagaacctgccaaggaaaatgccagc
cttgcaagcaacaccacacaggaggcaggacaaatggcatatgatgtggctaagggatcc
aaagccattctgacccaggccaagcataccagaactacagcttctcaccttaactcgcat
atggatttggctttaaagcagctgtcagagcaagaattactgatagagaaagcaaactcc
atgatcccaacagagcctgaagtgtcccttaccagcataaagcatgacatggaagcagct
aaacagcagttggaggcatattccgtaaccctaagtgaacttatcagcaaaatagacggg
agcgtgccactggagcgatttgatcggattctaaacgagacagaacgccgcctgagtatg
ctgcgtgggagtgtggagagcccagcactaggctccaagatccaaaagctgcattctgct
gctaaagaccaacagagccgcctgtccctcattgagcaggacattcaggagatacgagta
gagagagacagtctcagggacattgcctcaaacctgcctcagtcctgcccccaggcctca
gcagaaggtaaagcctag
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integrated database retrieval system
