Cyprinodon variegatus (sheepshead minnow): 107096870
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Entry
107096870 CDS
T06110
Symbol
ap4e1
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107096870 (ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107096870 (ap4e1)
Membrane trafficking [BR:
cvg04131
]
Endosome - Golgi transport
Others
AP-4 complex
107096870 (ap4e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
HEAT_EZ
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
107096870
NCBI-ProteinID:
XP_015249240
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MSDVVEKTLTALPSLLSLDSQPGSARLSTNSKLGNLIRGITELTSKHEEEKLIQRELLLI
KEQVSSPNTTMRQMKEIMVRAIYCEMLGYGVSFSYIHAIKLAQQGNVLEKRVGFCLIXXH
LKGHNETTWMFLQDLQSTNLIEVCMALTVVSQMFPKDMIPAILPLVEEKLNHPKEIIRRK
AVLALYKFYLIAPNQVQHIHNKFRKALCDKDPGVMSASLHIYLQLIQENPEGYKDLAGSF
ITILKQVVGGKLPMDFNYHSVPAPWLQIHLLRILSLLGKNDRSTSEIMYEILDESLRRAE
MNHNITYAILYECVKCIYTIYPKTDLLEKAAKCIGNFVMSPKINLKYLGLKALTYVVQQD
PKLALQHQMTIIECLDHPDLIIKRETLELLFRITNDQNVTVIVEKMLEFLRITEDDHTTI
DLVGKVAELAEKYAPDNKWFIETMNTVFLLGGDLLQPDIPNSFLKLLSEGFDSVEEDEKL
RLFAVNSYVSLLQEDCSKLPQRFLQVICWVLGEFSRLREDLEPEVVLRLLAKLLDMRSSS
SETKCWVLMAMTKLCPGGATSTLLQEVSETYSSSLDTVVRQRAQELQILSQDSELQARVL
PRRANMEAVEVDSSLSFLDGFVSEALAAGAAPYKPPHQRQEELSRSKALNLEPYGLSLPI
STSSCSITDRQSPTLLSISSGLSGDSNDFSHKGSSTALKLDGVKRLWGRDGYLVQKEPAE
NPPQTEVASPVRTVDQQANTSSSNGQTPTPSPECDPEKQQLASSLFVGLASQSSVCLMGK
PEPTSQRFRRKPKESGSTERITNPAVPPSNGADNLLCKNLLDSSDLDISSPEETHRLPED
LPAQNGSCYAEDESAETDPPLIIDEPPPNGHSDGSKDSSLASHLPAELSAFPRSEIVPLH
SNRSLAVSACHVQKEEAVLLVVFVSNCSDFILQQMRLQVTSEELEVSCVSDGPPEEMKSN
DVAVYQYLLTVKRPSVHFDLSATACWQLPADSPQTAQFSHKLPLTSFIRALRLSTEEYGA
MWLAYSQDTKQNLRLINDGQDPLDATLNVLKRKLHLHVVEVIGAEGIVACCLRQDQPCLM
HCRVHAGMLAVWLRSPVPELPDCLLYHCQRALQEL
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgttgtggagaaaacgctgacagctctgccaagtctgctctccttagactcc
cagcccggctctgctcggctgtccaccaactctaaactaggaaacctgatcagaggaatc
actgaactcacatctaaacatgaggaagagaaacttatccagcgggagcttttgctgatt
aaagaacaagtgtcttcccctaacaccactatgaggcagatgaaggagatcatggtgaga
gcgatctactgtgaaatgttgggctacggcgtctccttcagctatattcatgccattaaa
ctggctcagcaagggaatgttctggagaaaagagtcggtttttgcttgatttaataacat
ttaaagggtcataatgagactacatggatgttcctgcaggatcttcagagcacgaacctg
atcgaagtgtgcatggctctcacagtggtgagccagatgttccccaaagacatgatccct
gcaatcctcccgctggtggaggagaagcttaatcacccaaaagaaataattcgacgtaaa
gccgttcttgctctgtataagttctacctcatagcgcccaatcaagttcagcacattcac
aacaagtttcgaaaagctctgtgcgacaaagacccaggtgtgatgtcggcttctttacac
atctacctgcagctcatccaggaaaatccggaaggttacaaagatctagcaggtagtttt
atcaccatactgaagcaggtggtgggaggaaagctgcccatggattttaactatcacagt
gttcccgccccatggcttcagatccaccttctccgaattctctccttactgggtaaaaat
gaccgcagcaccagtgaaatcatgtatgaaatccttgacgagtctttgcgaagagcagag
atgaaccacaacatcacctacgctattttatacgagtgtgtaaaatgtatttataccatt
tatcccaaaactgacctgttggaaaaagctgcaaagtgcattgggaactttgtcatgtcg
ccaaagattaatctaaagtatcttggtctgaaagctctcacctacgtggtccagcaggac
ccaaagttagccttgcagcatcagatgaccatcatcgagtgtcttgatcacccggacctc
attatcaagcgggagacgctggagcttctgtttcgaataactaatgaccagaacgtcaca
gtgattgttgagaagatgctggagtttctgcgaatcactgaagatgatcacactaccatt
gacctggtggggaaggtggcagaactggctgaaaaatatgcaccagataacaaatggttt
attgagaccatgaacacagtgtttttactgggtggagacttgctgcagccggacatccca
aacagtttcctaaaactgctctcagagggatttgacagtgtggaagaagacgagaagttg
aggctgtttgctgtgaattcatacgtctctttgcttcaagaagactgcagcaaactgcct
cagcgcttcctccaagtaatctgctgggttctgggagaattctctcgtctacgggaggat
ctggagccagaggtggttttgaggctgctcgctaaactgctggacatgaggagcagcagc
agtgaaacgaaatgctgggtcctcatggcaatgaccaagctctgccccggcggagcgact
tcgactttgcttcaggaagtgtctgaaacatacagcagctccctggacacggtggtgaga
caaagagctcaggagctacagatcctcagccaagactctgagctgcaggccagggtgtta
ccccgccgtgccaacatggaggctgtggaggtggattcttcgctttcttttctggacgga
tttgtgtcggaggcgttggctgcaggcgcggctccttacaagcctccgcatcaaaggcag
gaggaactgtctcgatccaaagctctgaatctggagccttatggactgtcgttgccaatc
agcacgtcctcctgcagcatcacagacagacagtcccccacgctgttgtccattagctct
ggtctctcaggagacagcaatgatttctcacacaagggcagctctacagccttgaagctg
gatggtgtgaagaggctgtggggcagagatggttatctggtccagaaagaacctgcagaa
aaccccccccagactgaggtggccagcccagtgcggaccgtcgaccagcaggctaacacc
agcagctcaaacggtcaaactccgacaccaagccctgaatgcgatcctgagaaacagcag
ctagcttcctcgctgttcgtcggtctggcctcccagagctccgtctgtctgatgggaaag
ccggagccaacatcccagcgtttcagaagaaaacccaaagaatcaggaagtactgagcga
ataacgaacccagccgtcccgccctctaacggggccgataacctgctgtgtaagaacctg
ctggactcctcagacctggacatttcctcacctgaagagacgcacagactcccggaggac
ctccctgctcagaacggctcctgttatgcagaagacgagtcagcagaaacggatcctcct
ctcatcattgatgaacctcctccgaacggacactcagacggctccaaagactcgtccctc
gcctcacatcttccagcagagctttctgcgtttcctcgctctgaaatcgtccccctgcac
tccaaccgaagcctggctgtctccgcctgccacgttcagaaagaggaagcggtcttgctt
gtcgtctttgtctccaactgctcagattttatccttcaacagatgcgactgcaggtcacc
tctgaagaactagaggtatcctgcgtgtctgatggtccaccagaggagatgaaaagcaac
gatgtagcagtttatcagtatttgctaactgtaaaaagaccctcagttcactttgatctg
tctgcaacggcatgttggcagctgcccgcagactcacctcagacggcgcagttttcgcac
aaacttcctctaacaagcttcatcagagctttgaggctttccacggaggagtacggagcc
atgtggctggcctactctcaagacacaaaacagaacctgaggctgataaacgacggtcag
gatccactggacgctactttaaatgtactgaagaggaaactccaccttcatgtcgtggaa
gttattggtgcggaaggcatcgtggcgtgctgcctgcggcaggatcagccgtgtctcatg
cactgtcgggtgcatgccggcatgttggccgtctggctgcgctctcccgtccccgagctg
cccgactgcctcctctaccactgtcagagggctctgcaggagctctga
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