Cyprinodon variegatus (sheepshead minnow): 107096917
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Entry
107096917 CDS
T06110
Name
(RefSeq) P43 5S RNA-binding protein-like
KO
K09191
general transcription factor IIIA
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107096917
03021 Transcription machinery [BR:
cvg03021
]
107096917
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107096917
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
107096917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
TFIIIA_zf-C2H2
zf-C2H2_6
B129_C2H2-zf
zf-met
Zf-C2H2_ZNF451_1st
zf-C2H2_jaz
zf-C2H2_8
Ogr_Delta
zf-Di19
zf-C2H2_STOP2_C
Ta0938
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
107096917
NCBI-ProteinID:
XP_015249302
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MNGVICEARLFSCSNADCGATFSREWKLKEHETLHTGARPCQCAVLGCGRRFKRTSHLKR
HLVQHKGIKQFQCKMANCGKIFFFANKLKRHTHFAHGDKDGFFKCIQPTCSLSFKKRRML
KLHLKEHDVPAAFNCTKDGCTETFSSHIARKAHEKKHAGYLCPHEGCQVLEHTWGKLQKH
MAKHPATVTCPVCKKEFKKGAALQRHKRSHASHKPVLMCPKENCQAYFSTTFNLEHHIRK
VHLQLLKYKCSFPDCPRMFAMRESMQRHLLQHDTTAAKLGKRKRLKKTWQKRLNGNDHPL
VEDNLGRLFTLRMRISRRAKVETNLSGLFSERKIPHYVDPEVNLRGLFGIKQPRPLEMPE
VASVKS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgttatctgtgaggcccgattgttcagctgcagcaatgctgattgtggggcc
actttctcaagggaatggaagttaaaggaacacgagactctgcacaccggagctcggccc
tgccagtgcgcagtccttggatgcggtcgtcgcttcaagaggacatcccacctgaaacgc
cacttggtgcagcataaagggattaaacagttccaatgcaaaatggcaaactgtggaaag
attttcttctttgcaaacaagttgaaaaggcacacgcacttcgcacatggagacaaagat
ggcttttttaagtgcatccaaccaacctgcagtctgagcttcaagaagcgcagaatgtta
aagctgcacttaaaggagcatgatgtgcctgcagcgttcaattgtaccaaggatggatgt
actgaaacattcagctcccacatcgcacgcaaagcccatgaaaagaagcatgcaggttac
ctctgccctcatgaaggctgccaggtgcttgaacacacctggggaaaacttcaaaaacac
atggccaaacatccagctactgttacctgcccagtctgcaaaaaggagtttaagaagggt
gctgctctgcagaggcacaaacggtcccacgcttcccacaagccggtgctcatgtgtccc
aaagaaaactgccaggcctacttctccacaacctttaacttggagcaccacattcgcaag
gtgcatctgcagttgttgaaatacaagtgttccttccctgactgcccccggatgtttgct
atgagggagagcatgcagaggcaccttcttcagcatgacaccactgccgcaaagctgggg
aaacgaaagagactaaagaaaacctggcagaagcgcttgaatggaaacgatcatccgctg
gtggaggataacctgggacgtctctttaccctccgcatgcggatctccagacgtgccaaa
gtggaaaccaacctttcaggcctgttcagtgaacggaagatccctcactatgtagatcca
gaagtcaacttgcgcggcttgtttgggattaagcagccgcgtcctttggagatgccagag
gttgcatcggtgaaaagttga
DBGET
integrated database retrieval system
