Cyprinodon variegatus (sheepshead minnow): 107096931
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Entry
107096931 CDS
T06110
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107096931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107096931
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107096931
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107096931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf_RING_Vps8
zf-UDP
WWE_5
PHD_NSD
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
107096931
NCBI-ProteinID:
XP_015249323
Ensembl:
ENSCVAG00000022727
UniProt:
A0A3Q2EKN4
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MKELVQLCSRSLGIGGTQQSSRATGNNMLLASAVVVWEWLNEHGRWRPYSPAVSHQIEAA
IRSSDPRGGSVVLGQVDSRLSPYIIDLQSMHQFRQDTGTIRPVRRTFYDPASAPGQGWQW
EWENDAGTWTPYDMEVAIAIESAHSRQQTCLDLTPLGFCYLIDFKNMTQVNRQSQRCRRI
QRRADIAYPLVSGPLPVPKGGGVGGGGGLTGALLGVGVSGASMGVGSSVTSNGGLQVLGL
GQPCSCQQCMLVLSVKSNAGGAGGGAAAIQTLSRRALTMQRPKNSAAPAVRSLSPSKSAT
LGRGLQQNPAYYQTLPHGLAITKNTASPRRNAQLFAQSLAALTAGTSSMGLSVSSSRPPP
PSLPPPQPPCNQNPPSIPPKLSASTSSSNANDSVPTATLITPASSVTTPPSPVPSPSPVV
MKPQRSASTTVCHAPLPQRSSLAGLSRPALQRIAMAQSRSLIASGVPTVPVKNLNGSSPV
HPALAGITGILMSAAALPVCLTRPPKLVLHPPPVSKSDIKPVPGFNHCCRKTTKKQVRKG
KTPEEVVKKYLQKVKSPPEEDCTICMEPLGGPSGYKGPGVGPVSKAESVGRLAQCGHQYH
FQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPAGKMEYHVIPHSLPGHPDCKTIRIIY
NIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSERGRKVLRLLLVAWDRRLIFSVGTSSTT
GESDTVIWNEVHHKTEFGSNLTGHGFPDPGHLDNVLEELRAQGITEEDALVEK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagttggttcaactttgttccaggagtcttggaatcggagggacgcagcagagc
agcagggccaccggtaacaacatgctcctggcctccgcggtggtggtgtgggaatggctg
aacgaacacggccgctggaggccctacagccccgctgtctcccaccagatcgaggccgcc
atccggagcagcgacccccgcggagggagcgtggttctcggccaggtggacagcaggctg
tcgccctacatcatcgacctccagtccatgcaccagttcagacaggacacaggaaccatc
cgtcccgtccggaggactttttatgacccggcctccgccccgggtcagggctggcagtgg
gagtgggagaacgacgcgggaacgtggacgccgtacgacatggaggtggccatcgccatc
gagagcgcacacagccgccagcagacctgcctggacctgacgccgctcgggttctgctac
ctcatcgacttcaagaacatgacgcaggtcaacaggcagagccagcggtgccgtaggatc
cagcggcgtgcagacatagcgtacccgctggtgtccggtccacttcctgtccccaaagga
ggaggcgtcggtggaggggggggcctaaccggagcgttgctgggggtcggggtgtccgga
gccagcatgggggtgggcagctccgtcacctccaacggaggcctgcaggtcctgggcctg
ggccagccctgctcctgccagcagtgcatgctggtcctgagcgtgaagagcaatgcgggc
ggggcggggggcggcgccgcagccattcagactctgagccggcgagctttaaccatgcag
cggcccaagaactctgcggctcccgcggtcagatccctgagcccgtccaaatctgccaca
ctggggcggggcctccagcagaaccccgcctactaccagacgctgccgcacggcctcgcc
atcaccaaaaacaccgcctcgcctcggaggaacgcccagctcttcgcccagtcgctggcc
gctctcaccgccggtacctcctccatgggcctctccgtgtcttccagcagacccccccct
ccgtctctgccgccgccgcagcctccctgcaaccagaacccaccgtccatcccgcccaag
ctctccgcctccacctcttcatccaacgccaacgactcagtgccgaccgccacattgatc
acccctgccagcagcgtgaccacgcccccctccccggtgccgtctccgtcgcccgtggtg
atgaagccgcagcgttccgcatccacaacagtgtgccacgcccccttaccgcagcggtcc
agtctggccgggctgagcaggccggcgctgcagaggatcgccatggcccagtccagatcg
ctcatagcatcaggcgttcccaccgtcccggtgaaaaacctgaacgggtccagtccggtc
cacccagcgctggcagggatcacagggatcctgatgagcgctgcggcgctacccgtctgc
ctgacccggccgcccaaactagtgctgcaccccccacctgtcagcaagagcgacatcaaa
cccgtaccgggcttcaaccactgctgcaggaagaccaccaagaagcaggtccgcaaagga
aaaactccagaggaggttgtgaagaagtacctgcagaaagtaaagagtcctccagaggag
gactgcaccatctgcatggagccgctgggaggcccgtctggatacaaaggtccgggcgtg
ggccccgtctccaaggcggagtcggtggggcggctggcccagtgtggacaccagtaccac
ttccagtgtctggtggcgatgtacaacaacggcaacaaggacggcagcctgcagtgtccc
acctgcaaaaccatctacggcgtaaagacgggcaaccagccggcggggaagatggagtac
cacgtcatccctcactccctcccgggtcatcctgactgcaaaaccatccgcatcatctac
aacatcccgccagggattcagggaccagagcatcccaacccagggaagcccttcactgcc
agaggcttcccccgacactgctacctcccagacagcgagagaggacgcaaggttctaagg
ctgctcctggtggcgtgggaccgccggctcatcttctctgtcggtacttcaagcaccaca
ggagaatcagacaccgtcatctggaacgaggtccaccataagacggagtttggttccaac
ctgacgggtcacggcttccccgacccgggtcacctggataacgtcttagaggagctccgt
gctcagggcatcacagaggaagatgcactggtagaaaagtga
DBGET
integrated database retrieval system
