Cyprinodon variegatus (sheepshead minnow): 107096981
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Entry
107096981 CDS
T06110
Symbol
dazap1
Name
(RefSeq) DAZ-associated protein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107096981 (dazap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107096981 (dazap1)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107096981 (dazap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
107096981
NCBI-ProteinID:
XP_015249402
Ensembl:
ENSCVAG00000018607
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MNNNLVGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK
DPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKAESNKSKKIFVGGI
PHNCGEPELRDYFNRFGAVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMG
KKVEVKKAEPRDNKAPGQLGPGQWAPRGILTAANGWTAQPAPGWQQAYGPQGVWVSATGQ
PIGGYVPSLSASRGTPTQPPSPFNAFLVTTPAGSFAAPQGYPQQGYSTAPQFGYSFGTPH
GDQYAPQVPPPPTTPGAATLGFAPATTPTQDLSKAPTGQPDFSYSQYGLGNYPQDPSAYG
PTRPSHSYGQDEQGGCSAAKGVRKERRFKGDHGYGQDLTAFGHNFADPSQTAATYGAPTA
QPAAAPQPTASAFGRGQNHNVQGFHPYRR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacttagtcggagatgaagtcgggaaactttttgtaggtggactggactgg
agtactacacaagaaacactgagaaactacttctcacagtatggagaggtagtagattgt
gtcatcatgaaggacaaaacgacaaatcagtcgcgaggcttcggctttgttaagttcaaa
gatcctaattgtgtacgaacagtgctggagacgaagccacataaccttgatggaagaaat
attgacccaaagccatgtacacccagaggaatgcagcctgaaaagtcacgaactaaggag
ggctggaagggcagcaaagctgaaagcaataaatctaagaagatatttgtaggtggaatt
cctcataactgcggggagcctgaactcagggactatttcaatagattcggagcggtcaca
gaggtggtaatgatctatgatgcggagaagcagaggccccgaggttttggatttattact
ttcgaggccgaacaatcagtggaccaggctgtcaacatgcattttcacgacatcatgggc
aaaaaagtggaagtaaagaaggctgaaccgcgtgacaacaaagctcctggccagcttggt
cctggccagtgggctcccaggggaatcttgactgcagctaatggttggacagcacagccg
gccccgggctggcaacaggcttacgggccacagggagtgtgggtgtctgctactggccag
cctataggtgggtacgtaccttcgctctcagcaagccggggaacccccacgcagcctccg
tcaccctttaatgcattcctggtcaccaccccggctggcagcttcgcagcacctcagggc
taccctcagcagggctatagcacagcacctcagtttggttatagttttggcacaccccat
ggagatcagtatgctccacaagtcccccctccacccactactccaggagcagccacgctg
ggctttgcccccgccaccacaccaactcaggacttgagcaaggctccaacagggcagcct
gatttttcttacagccagtatggcttgggtaactaccctcaggacccctctgcctacgga
ccaacgcgtccttctcacagttatggtcaggatgaacagggaggatgtagtgcagctaaa
ggggtgagaaaggaaagaagatttaaaggagaccacggctacggtcaggacctgacggcc
tttggccacaactttgcagatcctagccagacggccgccacgtatggagctcctacagca
cagcctgctgctgcccctcaacccacggcgagcgctttcggcagagggcagaaccacaac
gtacagggcttccacccctatcgacgctga
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