Cyprinodon variegatus (sheepshead minnow): 107096994
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Entry
107096994 CDS
T06110
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107096994 (med23)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
107096994 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
107096994
NCBI-ProteinID:
XP_015249422
Ensembl:
ENSCVAG00000016161
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MALSMETQLQSIFEDVVKTEIIEEAFAGMFMDTPEDERTKLISCLGAFRQYWGTLPQESH
EQCVQWIVRFIHSQHSPKRISFLYDCLAMAVETSLLPPRMVCVALISSDSLEWERTRLWA
LTFKLIRKIIGGVDYKGVRDLLKAVLDKIQTIPTTVSSAIVQQLLAAREVVEYILDRNAC
LLPAYFAVTEIRKLYPEGQLSHWLLGSLISDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLRFPLRGMLPYDKDLFEPQTGLLRYVLEQPYSREMVCNMLGLNKQTLNI
AQQKQRCPVLEEQLVDLVVYAMERSETEEHFDADIGGTSQLLWQHLSSQLIFFVLFQFAS
FPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEC
IPVPDISKPQSTHSFAMTCIWIHLNRKAQNDNSKKQIDIPYSLKLHHEFLQQSVRNKTLG
MSDYKIALLCNAYSTNSDCFSLPMGVLVETIYGNGSMRINLPGTSCMASGSVTPLPMNLL
DSLTVHAKMSLIHSIATRVIKLAHAKSSLALAPALVETYSRLLVYMEIESLGIKGFISQL
LPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVEST
ALRLITALGSSEVQPQFTRFLNDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQ
GTWCKDILQTIMSFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWK
SMANENDIITHFSMQGSPPLFLCLLWKMLLETDRINQIGFRVLERIGARALVAHVRTFAD
FLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL
LLLKPNDFRNRVNDFVKENAPEHWLQSDWHNKHMNYHKKYPEKLYFEGLAEQVSPPLQLQ
PQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNT
LHYYERHLRDRTNLKRKLVHAIISSLKDNRTPGWCLSETYLKFGMNPREDNVWIPDDTYY
CKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLN
VVLKSQPLVPRENITAWMNAIGLVITALPEPYWIVLHDRIVSVLSSPALTSETEWAGYPF
ALLDFTACHQSYSEMNCSYVLALTHAVWHHSSIGQLSLIPKFLSETLKPIVQTEFQLLYV
YHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHCQHLSYMDPICDFLYHIKYMYTGD
SVKEQVEKIIMTLRPAMKLRLRFITHSSMNETSSSAAAAASASSASNSSSSSGTPLPPPP
SLSSNAAASPSSSQHAHTPI
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcactttcgatggaaacgcagctccagagcatcttcgaggatgttgtgaaaactgag
ataatagaagaggcttttgcagggatgttcatggatactccagaggatgaaaggactaaa
ctgataagctgtcttggagccttcagacagtattggggaactctgccacaggagtcccat
gagcagtgtgtgcaatggatagtgcggtttatccacagtcagcacagtccaaaaaggatc
tccttcctctacgactgtctggccatggctgtggagaccagtttgttaccgccaaggatg
gtgtgtgttgccttgattagttctgacagcttggagtgggaaaggactcgactgtgggca
ttaactttcaaacttatccgcaagatcatcggaggtgtggactacaagggcgtccgtgat
ctgctgaaagctgttctggataaaatccagaccatccccaccactgtcagctcagctatt
gtgcagcagcttctggcagctagagaggtggttgaatatattctggacagaaatgcctgc
ctgctgccagcctactttgctgtcacagaaatcaggaaactctacccagagggacaactc
tcacactggcttttaggcagtttgatatcagactttgtggacagttttcgaccgacagcc
agaatcaactctatatgcggacggtgtagtctgttaccggtggtgaataacagcggtgcc
atctgcaactcctggaagttagaccccacaacgcttcgcttccctctgaggggcatgctg
ccttatgacaaagacctgtttgagcctcagacagggttgctccgctatgtgctcgagcag
ccgtactccagagagatggtgtgcaacatgttgggactcaacaaacagactctgaacatt
gcccagcagaagcagcgatgcccggtgctggaggagcagctggtggacctggtggtgtac
gccatggagcgctcagagacggaggaacatttcgacgccgacatcggagggaccagccag
ttactgtggcagcacctctcctcccagctcatcttctttgtgctgtttcagtttgcaagc
ttccctcacatggtgctttctttacatcagaagcttgcaggcagaggccttattaaagga
agggatcacctgatgtgggtcctgctgcagttcatatccggcagcattcagaagaacgcc
ctagctgacttcttgccggtcatgaagctgtttgacctgctttatccagaaaaagagtgt
ataccagttcctgacattagtaagcctcagtcaacccattccttcgccatgacctgcatc
tggatccacctgaaccgtaaagctcagaacgacaactccaaaaagcagatagacatcccg
tactctctcaagctgcaccatgagtttctccagcagtcggtacggaacaaaaccctggga
atgtcggattataagatcgccttgctgtgtaacgcatacagcaccaactctgactgcttc
tcgctgccaatgggcgtcctggtggagaccatctatggaaacggatccatgaggatcaac
ctgcctggcaccagctgcatggcgtccggatcggtcacaccgctgcccatgaacttgctg
gactcgctcactgtgcatgctaaaatgagcctgatccacagcatcgccacacgtgtgatc
aaactggcccacgccaagtccagcctcgccctggcgccggcgcttgtggaaacatacagc
aggcttttggtctacatggagatcgaatcgttgggcatcaagggatttataagtcagttg
cttccaaatgtgtttaaatctcacgcgtggggaatccttcacacgttactggagatgttc
agctacaggatgcatcacatccagccgcactacagggttcagctactaagtcacctacac
agcctagctgcagtgccccagaccaatcagaaccaactgcatctgtgtgttgagagcact
gctttacggctgatcacagctttggggagttcagaggtgcagccccagttcacccgcttc
ctcaatgacccgaagacggttctgtctgcagagtctgaggagctaaaccgagctttgatt
ctcacactagccagagccacacatgtgaccgattttttcaccggctcagactccattcag
ggcacctggtgtaaagacatcctccagaccattatgagttttacacctcacaactgggcg
tcacacactctgtcctgcttcccagctcctctgcaggcgttcttcaagcagaacaatgtt
cctcaggagtcccgcttcaacctgaagaagaacgtggaggaggaatacaggaagtggaag
tcaatggccaacgagaatgacatcatcacccacttctccatgcaaggctcgcctcccctg
ttcctgtgtctgctatggaagatgcttttggagacggatcgcataaaccagattggattc
agggttttggagcgcataggagctcgtgcgctggtggcacacgtgcggacatttgcagac
ttcctcgtctatgaattctcgacttcagctgggggacagcagctcaacaagtgcattgaa
atcctaaatgacatggtctggaagtataacatagtcaccctggacagactgatcctgtgt
ctggcaatgcgaagccacgaggggaacgaggcacaggtttgctacttcataatccagctc
cttctgttgaagccgaatgacttcaggaaccgagtcaatgatttcgtgaaggagaacgct
cctgagcactggctgcagagcgactggcataacaaacacatgaactaccacaagaaatac
cccgagaaattatacttcgagggtcttgcggaacaagtgagcccccccttgcagctgcag
cctcagtacctgcccatctactttggtaacgtttgtctgcgcttcctgcccgtcttcgac
atcgtcatccaccgcttcctggagctcctccccgtctccaagtccctggaaacgctgctc
gatcacctgggcgggctgtacaagttccacgaccgccccgtgacgtacctgtacaacacc
cttcactactacgaacgacatctgagagatagaaccaacctgaagaggaagctggttcac
gccatcatttcctcgctaaaggacaaccgaaccccaggatggtgtctgagtgagacctat
ttaaaatttggcatgaaccccagggaggacaacgtttggataccggatgacacctactac
tgcaaactgattgggcgccttgtggataccatggcagggaagtcgcccggacccttccca
aactgtgactggaggttcaatgagttccccaaccctgcagctcacgccctgcatgtcacc
tgcgtggagctgatggccttggccgtaccgggaaaagatgttggcaatgctttgctcaat
gttgtactgaagagtcaacctctggttcccagggagaacatcacagcttggatgaatgcc
attggactggtgatcactgcgcttcctgaaccctactggatcgttctccatgaccgcatc
gtctctgtgctcagctctccggctctgacatcagagactgagtgggcggggtatcccttt
gccctgctggacttcactgcctgccaccaaagctacagcgaaatgaactgcagctacgtg
ctggccttgacccacgccgtctggcaccactcatccatcggacagctctctcttatcccc
aaattcctgtcagagaccctgaagcccatcgtccagacagagttccagttactctatgtg
tatcacctggtggggccgttcctacagcgctttcagcaagagaggacgcgatgcatgctg
gagattggggtggcattctatgagatgctgcaagctgtcgaccagcactgccaacatctc
agctatatggaccccatctgtgattttctctatcacatcaaatacatgtacactggggac
agtgtgaaggagcaggtggagaaaatcatcatgactcttcgcccagcgatgaagcttcgt
ctgcgcttcatcactcacagcagcatgaatgagacgtcttcatcagctgctgctgctgcc
tccgcatcgtcagcctccaactcttcctcctcttccggcactcccctgccgcctcccccc
tcactgtcctctaatgccgcggcctctccctcgtcctcccaacacgcacacacacccata
tga
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