Cyprinodon variegatus (sheepshead minnow): 107097247
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Entry
107097247 CDS
T06110
Symbol
ung
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107097247 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107097247 (ung)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
107097247 (ung)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107097247 (ung)
Prokaryotic type
107097247 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Toxin_ToxA
Motif
Other DBs
NCBI-GeneID:
107097247
NCBI-ProteinID:
XP_015249808
Ensembl:
ENSCVAG00000004443
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MRIAIKTRIAFNLVFYIVVYISREKRRTLRAAFNTAVLSNVAKRVSSLEMRVLTRLQTSS
LREKIFSPALCFSQYTKILRKKRKCAAVEAEPESQPPCPLSPEQLDRIARNKRAALERLA
TAHTPPGFGESWRKELQAEFVKPYFKKLMDFVSEERKRCTVYPPADQVFTWTEMCSIRDV
KVVILGQDPYHGPGQAHGLCFSVKRPVSPPPSLENMYKELASDIEGFQHPGHGDLTGWAK
QGVLLLNAVLTVKAHQANSHKDKGWENFTDAVVQWLSSNLEGVVFMLWGSYAQKKGASIN
RKRHHVLQAVHPSPLSAHRGFFGCKHFSKANDLLEKQGKSPIDWKAL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgccattaaaacacgcattgcttttaatttagtattttacattgttgtttat
atttcccgcgagaagcgcagaaccctccgagcggcgttcaacaccgctgtgttgtcgaac
gttgccaaacgcgtcagctcgcttgaaatgagagtgctaacacggcttcaaacgtcttct
cttcgagagaaaatattctcaccggctctgtgtttttctcaatataccaaaatcctccgg
aagaagcgaaaatgcgctgcggtggaagcagagccagagagccagcctccgtgtcctctg
tccccggagcagctggataggatcgcccgcaacaagagagcggcgctggagaggctggct
accgctcacacgcctccagggttcggggagagctggaggaaggagctacaagctgagttt
gtaaagccttactttaaaaagctgatggattttgtgtctgaagagaggaaacgctgcaca
gtttacccacctgctgatcaagtgtttacctggaccgagatgtgcagcattagagatgtt
aaagttgtcattctgggtcaagatccgtatcatggtcctggtcaagctcacggtctgtgc
ttcagtgtgaagagaccggtttcccctcctcctagtttggaaaacatgtacaaagagttg
gcttcagacatcgaaggctttcagcacccaggtcatggagacctcacaggatgggctaaa
cagggtgtgcttttgctcaacgctgtgctgaccgtcaaagcgcaccaagccaactcccac
aaagataaaggctgggagaacttcactgatgctgtggtgcagtggctcagcagcaacctg
gagggtgtcgtcttcatgctgtggggatcatatgcgcaaaaaaaaggggcttccattaac
agaaagcgccaccacgtccttcaggctgtgcatccttctcctctgtctgctcatcgagga
ttttttggatgcaagcatttctcaaaggcaaatgacttgctagaaaaacaaggaaagtct
cccattgactggaaggctctctga
DBGET
integrated database retrieval system
