Cyprinodon variegatus (sheepshead minnow): 107097275
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Entry
107097275 CDS
T06110
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107097275 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107097275 (ube3b)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107097275 (ube3b)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
HECT type E3
107097275 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
107097275
NCBI-ProteinID:
XP_015249854
Ensembl:
ENSCVAG00000003732
UniProt:
A0A3Q2FFZ1
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MFSVPQSSKSEFLDKARQAREERKGYKEKEKAATQIQALVRRFLCRCRLQKEIRKEVDDY
FQASEAGTTKRNALSIFKIARKLLFIYRLEDKMRFEKLCRAILASMEVENEPKVWYVSLA
LSKDLTIPWLKQIKDVLWICCQLLKKLKPDILQDNKLITLYLTMLVTFTDTSTWRIVRGK
GEALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLSKGTLTAIFSLSLRPVV
AAHFSDNLLRSFLLHIMSVPAVVSHLSVLTPECMTLIQTHDLLRKFVLFLSREEQCLDIC
VCLEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQHLWGVSVIRTLFSDVLSKKLESQESTPPPPQPSTS
QNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTTLSTLTQIRLQ
ILTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSRHLI
TILDDIEVYEEQTSFKIEELVTISFFLNTFVYKMIWDGILENAKGEKLELFHSVHGWLMV
LYERDCRRRFTPDDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFRNI
VTKEKESLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDV
GDLGLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFI
RGFRSIINPEWLHMFSTPEVQRLISGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDIL
SSDFNAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgtccctcaaagctccaagtcagagtttctggacaaggccaggcaggccaga
gaggaaagaaagggatacaaagagaaggaaaaagcagcaacccagatccaagctctggtg
agaagattcctctgtcgctgcaggctgcagaaagagatcaggaaagaagttgatgattat
ttccaagcttctgaagcaggaacaacaaaaagaaatgctctttcaatttttaaaattgca
cgaaaattattattcatataccgccttgaggacaagatgagatttgagaagctatgtcga
gctattctggccagcatggaggtggaaaatgagcctaaagtctggtatgtttccttggct
ctctccaaagacctcactattccctggctgaaacagatcaaagatgtgttgtggatttgc
tgccagctattgaaaaaactaaagcctgacatactccaagacaacaagctgattacgctg
tacctcaccatgctagtgaccttcacagacacgtcgacatggcggatagtccggggaaag
ggtgaagctctgaggcctgctttgacaaggatttgtgagaacatcatggggcatctgaat
cagaagggattctactcaatactgcagatcctgttgaccaacggcttggcccggtctaga
ccatcgctctctaaaggcactctgactgctattttctctttgtctttgaggccagtcgtc
gctgctcatttttcagacaacctgctccgttccttcctcctccacatcatgtccgttcca
gctgttgtgtcccaccttagtgtcttgactccagagtgcatgacgttaatccagacccat
gacctcctacggaagttcgttttgttcctaagtcgggaagaacagtgtctggacatctgc
gtgtgtctggaaggcagccacacgctctgcttacttggaaacctgatccacttgggttac
cttaacgagaaagtcttagaagaagaggccaaccatttcgtcaaggacctgaccgacatg
ttgtcgtactgccaaagatacgtttcgcaaaagaagtccaacttgacgcattggcaccct
gtcctgggctggttctctcaaacggtggactatggtctcaatgaatcaatgcctctggtc
actaaacagcttcagcatctgtggggcgtatctgtcattcgaactctcttcagcgacgtc
ctctccaagaagctggagagtcaggagtccaccccgccgccgccgcagccgagcacatct
caaaacaatctacccgttaaaaatctttttaagagagcatttcagaagtctgcttctgtg
aggaacatcctgaaacccgttggaggaaagcgagtggactcggctgaagtccagaaagta
tgcagcatctgtgtgctctaccagactactctgtccacgctgacccaaatacgcctgcag
atactcaccggtctcacacatctcgatgaccttttacccaaactctgggctttcatctgt
gagctgggtcctcagggggggctcaaactgttcatggagtgtctcaacaatgatacagag
gagtccaaacagctcctcgctatgctaatgctgttctgtgactgctcccgtcatcttatc
acaattttggatgacattgaagtctatgaggagcaaacatccttcaagatagaggaactc
gttaccatctccttttttctgaacacatttgtgtacaaaatgatttgggatggtatttta
gaaaatgcaaagggagaaaaactggagctttttcatagcgttcatggttggctgatggtg
ctgtatgaacgggactgcaggcgcaggtttacccctgatgaccactggcttcgcaaggat
ctgaagccgagcttattgtttcaagagctggaaaaagggaaaaaaagagcccagcttctc
ctgcagtacatcccacatgttataccgcataaaaatagagtgctgctgttcagaaacatc
gtcacaaaggaaaaagaaagtttagggttggtagaaaccagctcagcttctccacatgtc
acccatatcactattcgccgctcacggatgctggaggacggatatgaccagctccgccgg
ttaccggtgaattccataaagggagttattcgtgtgaagtttgtcaatgaccttggagtg
gacgaggctggaatcgatcaggatggagtcttcaaagagtttctagaggagatcattaaa
aaagtttttaatcctgcactcaatctcttcaagactacaagtggaaatgaaaggttgtac
ccgtcacccacatcctacatccacgagaaccacttgcagctctttgagtttgttgggaaa
atgcttggtaaagctgtttatgagggcattgttgtggatgttccctttgcatcgttcttc
ctcagtcaagtcctgggccaccaccatagtaccttctacagctccatagatgagcttccc
tctctggattctgagttttacaaaaaccttacttccattaagcgctacgatggtgatgtc
ggagatctaggactgactttgtcctatgatgaggatgttatggggcagcttgtctgtcac
gagttgatacctggaggaaaaactatgccagtcaccaatgagaacaagatcagctacatc
cacctgatggctcacttccggatgcacacacagattaaggagcaaacggccgcttttatc
cggggcttccgcagcatcattaacccagaatggctgcacatgttttccacgcctgaggtg
cagcggctcatctcaggggataacgctgagattgatctcgatgacctcaaaaagcacaca
gtctactatggaggtttccacagcagccaccgtgtcatcatctggctgtgggacatcctg
tccagtgactttaatgctgaagagagggccatgttccttaaatttgttaccagctgctca
aggccacctcttctagggtttgcttacctcaaaccacccttctccatccgctgcgtggaa
gtttcagacgatcaggacacaggggataccctcggcagtgtccttaggggcttcttcacg
atccggaagaaggagcccggtggtcgacttcctacttcgtctacgtgtttcaatcttctc
aagctgcccaactacagcaaaaagagcatcctgcgtgacaaactgcgctacgccatcagt
atgaatacaggcttcgagctctcctaa
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integrated database retrieval system
