Cyprinodon variegatus (sheepshead minnow): 107097300
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Entry
107097300 CDS
T06110
Name
(RefSeq) filamin-B-like
KO
K27392
filamin-B
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107097300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107097300
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107097300
Intermediate filaments
Intermediate filament-binding proteins
107097300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
DUF5060
Big_3_5
CFSR
CH_2
Motif
Other DBs
NCBI-GeneID:
107097300
NCBI-ProteinID:
XP_015249884
Ensembl:
ENSCVAG00000002498
LinkDB
All DBs
Position
Unknown
AA seq
2460 aa
AA seq
DB search
MPATEKDLAEDAPWKKIQQNTFTRWINEHLKCVNKRIGDLQLDLGDGLRLIALLEVLSQK
KMYRKYHSRPNFRQMKLENVSVALEFLEKENIKLVSIDSKAIVDGNLKLILGLIWTLILH
YSISMPVWEGEDQEAESKTPKQRLLGWIQHKVPDLPITNFSQDWRDGKALGALVDSCAPG
LCPDWETWDSVRPVDNASEAMQLADDWLGIPQVIAPEEIIDPSVDEQSVMTYLSQFPKAK
LKPGAPLKPKLNPKKARAYGPGIEPTGNRVLRPAVFTVDTFSAGQGQVMVYLDHPDGTRE
ELKVEPNDGKKTYSVTYIPQVMGAHKVTVLFAGQQIPKSPFEVNVDKALGDASKVTVKGP
GIEPVGNIANKPTYFDIYTAGAGKGDVTAMIRDPQGRQNSVEVMMEDKGDGTFRCTYNPL
QAGPHTITVTFGGVGVPKSPFGVDIGPACMPGACRATGRGLQPTGMRVKQVGDLKVDTRN
AGSGELKVLIKDPRGMEEPVKQVSSQDGVFSYEYYPKSPGKYTVSITWGGQHIPKSPFDV
AVSPEAGPQQIRAWGPGLEGGIVGKPATFVVESIGTDVGVLGFAIEGPSQAKIECEDKND
GSCDVRYWPTEAGEYAVHVTCDEEDIEHSPFMAHIIPDNHTSHPEKVQAYGPGLEASGCQ
VDQLAEFTVESKGAGKGPLKITAQDAEGLPVEVKVKSKGEGLYQCSYTPSSSLKHTVSIT
WGGVSIPNSPFRVNVGKGSHPNKVKVLGPGVERNGLKANEPTHFTVDCSGAGDGDVSVGI
KWDSNSAGEQEADVDFDIIPNANDTFTVKYVPPAAGRLTVKVLFTDQEVPQSPFMVKVEP
SHDASKVKAKGPGLAPSGVESGKPTHFTVMTKGAGKAPLDVTFSSSVKDFDIIDNYDYSH
TVKYTPVQQGEMTIVVTFGGDPISSSPFTVGVAAPLNLSKISVDGLDSRVEVDEEQQFMV
DTKGAGGQGQLEVEVLGPSQQAVPCKAEPQPGKADVTLVRYTPTEEGVYAVNVTYDGHPV
PGSPFSVEAQLPPDPSKVKAFGPGLKGGLVGDPAEFTIDTKGAGTGGLGLTVEGPTEAKI
ECSDNGDGTCSVSYLPTEPGDYLVNILFENVHIPGSPFRADIQMPFDPSKVLASGSGLKK
AKVGEISVLNVDCSRAGPGQLSLEAVPDASPSSPGDSGSGQDSMDPLQTYQLLDVKLNQL
EATCSNKLKTRNPTFAHRSLQNLTSYSTTYILARSIETMQKANQLEPAEDWDGGPASSPF
PGSPFKVPVKGVVDSSKVKVSGPGVASGVRANIPQSFTVDCSKAGEAPLAVAVNGPKGLA
EPVEVTDNGDGTHSVSYTPSMEGPYSVSIKYADEDIPRSPFKFRVLPTHDASKVRASGPG
LTSGVPASFPVQFNIDARDAGQGQLSVLITDQDGKPKQPNIHDNGDGTYTVSYIPDRTGR
YTIVIKYGGDDIPASPYRVRASASGDASKCTVTGPGVGPTVAIGEELGLVVNAKGAGKGK
VSCMVVQPDGREVEAEVLENEDGTFDIYYTAPAPGNYAIYVRFGGENIPCSPFKVMATDE
VPIREQQMAKQRHAGPPRAGFQPWVTSENYQPVSSNLNGSGFRPFDMIIPFSFRTGEITG
EVLMPSGQSAQPVITDNMNGTVTVQYSPTQAGLHEMHIKYNGTHIPESPLQFFVNHTSSP
NVTAYGPGLSYGTANKVAMFTVFTDDASEGGLDLAIEGPSKAEISCVDNKDGTCSVSYLP
TLPGDYNILVKYNDDHIEGSPFTARITEDNQRRSQVKLGSAADFSLDINESDLSVLSASI
RSPSGQDEPCLLKRMANNHIGISFIPREVGEHQVSILKNGHHIANSPITIMVVQSEIGDA
GRVKVHGDGLVEASTFTNADFVVDTREAGYGGLALSIEGPSKVDIQTKDMEDGTCGVTYC
PTEPGNYIVSIRFAEEHVPGSPFTVRVTGEGRIRESITRRQKAASVVSVGGVCDLNLKIP
ALDTQDITAEVTSPSGTSQPAELVSMGNDTYCVRFVPTQMGVHTVDVKYRGVHVPGSPFQ
FTVGPLGEGGASKVQAGGTGLEGAVAGEPAEFSIWTREAGAGGLSVSMEGPSRAEISFDD
RKDGSCGISYVAQEPGDYEISVKFNEQHIPDSPYLVPVVAPVNDARRLTVAGLQESGLKV
NHPASFAVRLNGAQGKLEAKVHSPSGALEKCAVTELEKDKYAIRFIPRENGVHTIDVKFN
GSHIPGSPFQVRVGEPGQIGEAGLVSAYGSGLERGTTGTQSEFIINNTKAGPGALTVTIE
GPSKVKMDCQEIPEGYKVHYTPMAPGSYVISIKYGGPNHITGSPFKARVTGARLVNATNS
ETSTLMLDPTVRSSSSFLQSGLPRPGDSDASKVLSRGSGLSKAFVSQRSNFSVDCSKAGK
NMLLVGVYGPQVPCEEVLVKHLGNLQYNVSYVLKEQGNYILVVKWGDDHIPGSPFNVTVP
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atgccggccacagagaaggacctggcggaagacgccccgtggaagaagatccagcagaac
accttcacccgctggatcaacgagcacctgaagtgcgtcaacaagcggatcggggacctg
cagttggacctgggagacggcctgcggctcatcgccctgctggaggtcctgagtcagaag
aaaatgtacagaaagtaccactccaggcccaacttcaggcagatgaagctggagaacgtc
tcggtggcgctggagttcctggagaaggagaacatcaagctggtctccatcgactctaaa
gctatagtagatgggaacctgaagctgatcctgggattgatctggaccctgatcctgcac
tactccatctccatgccggtctgggagggcgaggaccaagaggcagagtcaaagacacct
aaacagcgtctgcttggctggattcaacacaaagtccccgatctgccaatcaccaatttc
agccaagactggagggacgggaaagcactgggagctctggtggacagctgtgctccaggt
ctgtgtccagactgggaaacttgggactcggtcagaccggtggacaacgcttctgaagcc
atgcagctggccgacgactggctgggcatccctcaggtgattgctccagaggagatcatc
gaccccagtgttgatgagcagtctgtgatgacctacctgtctcagttccccaaagccaaa
ttaaagcctggagctccactcaaacccaagcttaaccctaagaaggcccgtgcatacgga
ccaggtatcgagcccacagggaacagagttctgcgtcctgctgtgttcacggtggacacc
ttcagtgcgggtcagggccaggtcatggtctacctggaccatccagacggcactcgagag
gagctgaaggtggagcccaacgatggcaagaagacatacagcgtcacctacattcctcag
gtcatgggagctcataaggtcacagtgctgtttgcggggcagcagatacctaaaagtcca
tttgaggtgaacgtggacaaggcgctgggagacgcctccaaagtgacggtcaaaggtccg
ggaatcgaacctgtgggtaacatcgccaacaaacccacctactttgacatctacacagca
ggagcaggaaagggagatgtgacagccatgatccgagacccacagggtcgccagaacagc
gtggaggtcatgatggaggacaagggtgatggcactttccgctgcacctacaaccccctt
caggctggaccacacaccatcaccgtgacctttggaggagtaggtgtccccaagagccct
tttggtgtggacatcggccctgcctgcatgccaggagcctgcagggcgacgggtcggggt
ctgcagcctacgggcatgagagtgaagcaggttggggacttgaaggtggatacgaggaac
gctggcagtggagaactaaaggtcctcatcaaagatcccagaggcatggaggagcctgtg
aagcaggtctctagtcaggacggcgtgttctcctacgagtattatcccaaaagtcctggc
aagtacaccgtctccatcacctgggggggtcagcacatcccaaagagtccctttgatgtg
gcagtcagtccagaggcggggcctcagcagatcagggcctggggtccaggtttggagggg
ggcatcgttggtaaacctgcaacctttgtagttgagtccatcggcaccgatgtaggagtt
ctcggtttcgccatcgaaggtccttcccaggctaaaattgagtgcgaggacaaaaacgac
gggtcttgtgatgttcgttactggccaacagaggcgggcgaatatgccgtccatgtgacc
tgtgatgaggaggacatcgaacacagccccttcatggctcacattatccctgacaaccac
accagtcacccagagaaggttcaggcttacgggcctgggctcgaggcaagcggctgccag
gttgaccaactggctgagttcacagtggagtctaaaggagctgggaaaggtcctctgaag
atcacagctcaggatgcagaggggcttcctgtggaggtgaaggtgaagagtaaaggagaa
ggattgtaccagtgctcctacacgcccagctcgtctctgaagcacacagtgtccatcacc
tggggaggagtcagcatccccaacagccccttcagggtgaacgtggggaagggaagtcac
cccaacaaggtgaaggtgcttggtcccggagtggaacgaaacggactgaaggccaacgag
ccaacccacttcacagtggactgctcaggagctggagatggggacgtcagtgtaggcatc
aagtgggattccaactcagcgggcgaacaggaagccgacgtggactttgacattatcccc
aatgccaatgacacattcacagtcaagtacgtccctcctgctgcagggaggctgacggtt
aaagtccttttcactgatcaggaagtacctcagagtccgttcatggtgaaagttgagccg
tcccatgacgcatcgaaggtcaaggccaaaggtccaggacttgctccaagcggtgtggag
agcgggaagcccacccatttcacggtgatgaccaaaggagcgggtaaagctccgctggac
gttaccttctcctcctcagtcaaagactttgacatcattgacaactacgactactctcac
accgtcaagtacacacctgtgcagcagggggagatgaccatcgtggtgacgtttggaggt
gaccccatttccagcagccccttcacggttggtgttgccgccccgctgaacctcagcaag
atctctgtggacggccttgatagcagggtggaggtggatgaagagcagcagttcatggtg
gacacaaagggtgcaggaggtcagggtcagctggaggtggaggtgctgggtccaagtcag
caggcggttccttgcaaagcagagcctcagcctggaaaagcagatgtcactttggtccgc
tacaccccgacagaggagggggtctatgctgtcaacgtgacctacgacgggcaccctgtg
ccggggagccccttctctgtggaggcccagctgcctccagaccccagcaaggtgaaggcg
tttggacccggtctgaagggagggctggtcggggacccagcagagttcaccatcgacacc
aagggggccggaaccggaggtctgggcctgaccgtggagggaccgactgaggcgaagatc
gagtgttctgataacggcgacggtacctgctctgtctcctacctgcccaccgagcccgga
gactacttggtcaacatcctgtttgaaaatgttcacatccccggctcgccgttcagagcc
gacatccagatgccctttgacccctccaaggtgctggcctcggggtctgggctgaagaag
gcgaaggttggagagatcagtgttttgaatgtggactgttctcgagccgggccgggccag
cttagtcttgaagctgtgccggatgcctccccgagcagcccaggagattctggttcaggg
caggacagtatggaccccctgcagacctaccagctcctggacgtcaagctgaaccagctg
gaagcgacatgcagcaacaagctgaagaccaggaatccaacctttgcccaccgatccctc
cagaacctcacatcatactctacaacctatattttagccagaagtattgagacgatgcag
aaggcaaaccagttggagcctgcagaggactgggatggaggtccagcttccagtccgttc
ccaggaagtccatttaaggtcccagtgaaaggcgtggtggactccagcaaggtcaaggtc
tctggtccaggcgtggcatcgggcgtcagggcaaacatcccacaatcctttactgtggac
tgcagtaaggcaggcgaggcccctctggcggtggccgtcaacggccctaaaggactggct
gaaccagtggaggtgacggacaatggggacgggacccacagcgtgtcttacactccgtcc
atggaaggaccgtactccgtctccattaaatacgcagacgaggacattccccgcagcccc
tttaagttcagagtgctgcccactcacgatgccagtaaagtgcgagccagtggacccggg
ctcaccagcggcgtccccgccagctttccagtccagtttaacattgacgcccgagatgcc
ggtcagggccagctaagcgtgctcatcacagaccaggatggcaaacccaagcagccaaat
atccatgacaacggtgacggtacatacacggtatcctacatccctgaccggacggggcgc
tacaccatcgtcattaagtacggtggagacgacatccctgcgtcgccctacagagtccgc
gcctcggcgtccggagatgcgagcaagtgcacggttaccggtcccggggtgggccccacc
gtggccattggcgaggagctcggcctggtagtcaatgcaaagggtgctgggaaaggaaag
gtgagctgtatggtggttcagcccgacggcagagaagtggaagctgaggttctggagaac
gaggacggcacctttgatatttactacactgccccggcccctgggaactacgccatctac
gtccgatttggaggagagaacatcccctgcagtcccttcaaagttatggctactgatgaa
gtccctatcagggaacagcagatggcgaaacagagacacgctggtccccctagagctggc
ttccagccatgggtgacatcagaaaactaccagccagtcagcagcaacctgaatggcagc
ggcttcagaccatttgacatgatcataccgttctccttcaggacaggagaaatcactggg
gaggtgttgatgccttcaggacaatctgcccagcctgtgatcacagacaacatgaatggg
acggtgactgttcagtactcgcccactcaggccggcctgcacgagatgcacatcaagtac
aatggcacacatatcccagagtcgcctcttcagttctttgtcaaccacaccagcagtccc
aatgtcacagcctacggtcctggactgagctacggcaccgccaacaaggtggcaatgttc
accgttttcacagacgatgcctctgaaggaggtctggacctagctattgagggtccgtcc
aaagcggagattagctgcgtggataacaaagacgggacatgcagcgtcagctaccttccc
acgctgcccggagattacaacatcctggttaaatacaacgatgatcacatcgagggcagc
ccatttactgcaaggatcaccgaggacaaccagcgccgctcgcaggtcaaactgggctca
gcagcagatttctctctggacatcaatgagagcgacctgagtgtgctgagcgccagcatc
agatcgccttcaggacaggatgagccctgcctgctaaagaggatggcaaacaaccacatt
ggcatctccttcatccctcgggaggtgggtgagcaccaggtcagcatactgaagaatggc
caccatatcgccaacagccccatcaccatcatggtggtccagtctgagatcggagacgca
ggacgagtcaaagtacacggagatggtctggtggaggccagcaccttcaccaatgctgac
tttgtggtcgacacacgggaggcgggttatggtggtctggctctgtccattgaaggtcct
agcaaggtggacattcagacaaaggacatggaggatgggacgtgtggagtcacctactgc
cccactgaacctggaaactacattgtgtccatccgctttgcagaggaacacgttccagga
agtccgttcacagtgagggtgaccggtgaaggtcggatccgggagagcatcacccgtcgc
cagaaggcggcatctgttgtcagcgtcggcggtgtgtgtgacctcaacctgaagataccc
gccctggacacacaggacatcaccgccgaggtcacctcaccgtccggaaccagtcagccc
gctgagctggtttccatgggcaacgacacctactgcgtgcggtttgtgcccacacagatg
ggcgtgcacaccgttgatgtaaagtacaggggtgtgcacgtaccaggcagtcctttccag
ttcaccgttggaccactaggagagggcggagccagcaaagtgcaagccgggggtacaggc
ctggaaggagctgtggctggagagccagccgagttcagcatctggacgagggaggccgga
gccggtggtctgtccgtctccatggagggacccagcagggcagagatctccttcgatgac
cgcaaagatggatcctgcggcatctcctacgtagctcaggagcctggtgattatgagatc
tcagtgaagtttaatgagcagcacatccctgacagcccctacctggttcctgttgtggct
ccggtgaacgatgcccgacggctcactgttgccggccttcaggagtccggtctaaaggtc
aatcacccagcatcctttgcggtgcgtctgaatggagcacagggcaagttggaggccaaa
gtccacagtccttctggagctctggagaagtgtgcggtcacggagctggagaaagataaa
tacgccatccgcttcatccccagggagaacggcgtccataccattgatgttaagtttaac
ggctctcacattccgggaagtcctttccaggtccgtgttggagaaccaggacaaattgga
gaagctggtctagtctcagcttatggatctggtttggagagaggcaccacaggaacccag
tcagagttcatcattaacaacactaaagctggtcctggagctttaacagtgaccattgag
ggtccctccaaagtgaagatggactgtcaggagatcccagagggttacaaagttcactac
actcccatggccccgggcagctacgtgatcagcattaaatacggaggacccaaccacatc
actgggagtccctttaaggcccgagtcacaggtgctcggctggtgaatgcgaccaactcc
gagacgtcaaccctaatgctggatccaactgtacgatcatccagcagcttccttcagagc
ggcctgcccagaccgggagactctgatgccagcaaggtgctgagccgaggatccggactc
agcaaggccttcgtgagccagagaagcaacttctctgtggactgcagcaaagctggtaag
aacatgctgctggtgggcgtgtatggccctcaggtcccctgtgaggaggttctagtcaaa
catctgggaaacctgcagtacaacgtcagctacgtgctgaaggaacagggcaactacatc
ctggtggtgaagtggggcgatgaccacatccctgggtctccattcaacgtcaccgtccca
tga
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integrated database retrieval system
