Cyprinodon variegatus (sheepshead minnow): 107097542
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Entry
107097542 CDS
T06110
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
107097542 (gpcpd1)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
107097542 (gpcpd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
107097542
NCBI-ProteinID:
XP_015250201
Ensembl:
ENSCVAG00000013148
UniProt:
A0A3Q2E4F7
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
METTKVTFSIRGETSPGEVIAIVGSCEALGKWSYQKAVTLHPPVDGGNTWTVTISVPKGV
VSQYRYFKGLFLQSKSAGGPCQVVVNLWETHHQPRTMSPTAAEQTIDDGEFGFHNGVKCV
DSGWLTCQTDIRLRLHYSKRPPVSITKKKFKKSRFRIKLTLEGIEEEEDEEEELSPSSSH
KMTPTLEISLITENGYKSRHSQPECGYALEPSRWTEYSIHTMDPDNMELTFEFFEEDLSE
HVVQGDIHPGHVGTACLLSSSFLESGKDSGVATLPIMGRNSRQTIGKVRVDYLVIRPIQG
LQWDMSSSYTKHWKKRSTVDVGHRGAGSSHAAKHHKVRENTIASFTSAAKHGVAFVEFDV
HLSKDAVPIVYHDLTCCIATKKKKNDQTLELIEVPVKDLTFDQLQLLKLAHVTAMTGSDD
KDLLDEEDEIDEHQPFPSLSQIFQAVPENVGFNIELKWISQMKDGTWDGNLSSYFNMNTF
LDIILKCVMQNAGRRRVIFSCFDPDICTMVRLKQNKYPILFLTQGVSEKYPELMDIRCQT
TQIAISFAQSENILGISAHTEELLKHLNYIEEARSKGLVVFGWGDDNNEHAIRNKLRERG
IDGLIYDSICDPQGEPDIFQVEEQHSLQEVITEETLKSSACSCYSIPCSSVPCLASKVHG
GSAESDSGLSSS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccaaagtaaccttttccatcagaggggagacctctccaggtgaggtgatt
gctatagtcggcagctgtgaggctctgggaaagtggagctatcagaaagctgtaactcta
catccaccagtcgatggagggaacacatggacagtaacaatctctgtgcccaaaggagtt
gtttcccagtatcgctatttcaagggcttgttcctacagtcaaagagtgcaggtggccca
tgtcaagtcgtagtcaatttgtgggagacccatcatcagccccgcacgatgagccccaca
gcagcagaacagacaattgatgatggggaatttggattccacaatggggtgaaatgtgtt
gactcaggatggctgacatgccaaacagacattcgtctgcgcttgcactattccaagagg
cctccagtgtcaattaccaagaagaaattcaagaagtcccgcttcaggatcaaacttacg
ttggagggcattgaggaagaggaggatgaagaagaggaactcagcccttcctcttcgcac
aagatgacccctactttggaaatcagtttgatcactgaaaacggctacaagtcccgtcac
tctcagccggagtgtggctatgccctggagccgtctcgatggactgagtacagcatccac
accatggaccctgacaacatggagctcacctttgagttttttgaggaggatctgagtgag
catgtagtccagggagacatccatcctggacacgttgggacagcctgcctcctctcttcc
tcatttttggagagcggcaaagattcaggagtagctacacttcccataatgggacgaaac
tccaggcagacaattgggaaagtcagagtggattacctggtgatccggccaatccagggg
ctgcagtgggacatgagctcatcgtacacaaagcactggaaaaaaagaagcactgtagat
gtgggtcacagaggagctggaagctcacatgctgccaaacaccacaaagtcagagaaaac
acaattgcttctttcacaagtgctgctaaacatggtgtagcctttgtggagtttgatgtt
cacctctctaaggatgctgtgcctatagtataccacgacctgacatgctgcatcgccacc
aaaaagaagaagaatgaccagactctggagctcatcgaggttcctgtcaaagacctgaca
tttgatcagctgcagctgttaaagctggcccatgtcactgccatgacaggaagtgatgac
aaagatctcctggacgaagaggatgaaattgatgaacatcagccattcccctcactatcg
cagatttttcaagctgttcctgagaatgttggctttaacattgaactgaaatggatcagc
caaatgaaggatggaacttgggatgggaacttgtcctcatacttcaacatgaataccttc
ctggacattattcttaaatgtgtcatgcagaatgctggaagaaggcgtgttatcttctca
tgttttgacccagatatctgcacaatggtgcgactcaagcagaacaagtaccccattctt
ttcctgactcagggagtatcagaaaaatatcctgagctgatggacattcgctgtcaaact
acgcaaattgccatcagcttcgctcaaagcgagaatatcctgggaatcagcgcccacaca
gaggagctgctgaagcaccttaactacatcgaggaggctcggtctaaaggcctggtggtg
tttggctggggagatgacaacaacgagcatgctatcagaaataagctcagggagcgagga
atcgatgggctcatctatgacagtatctgtgatcctcaaggagagccagacatcttccag
gtagaagagcaacactccctgcaagaggtcattacagaggagaccctaaaaagctctgcc
tgctcctgctactccattccctgctcctcagtgccttgcttagcctccaaggttcatggt
ggaagtgcagagtcagattctgggctcagctcttcatag
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