Cyprinodon variegatus (sheepshead minnow): 107097557
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Entry
107097557 CDS
T06110
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107097557
Spliceosome [BR:
cvg03041
]
Common components
Common spliceosomal components
General mRNP proteins
107097557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
107097557
NCBI-ProteinID:
XP_015250222
Ensembl:
ENSCVAG00000015985
UniProt:
A0A3Q2D4H7
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDENKSYHANGHDEHGKKKRRSRSRSRSPGSRKKKSRSRSKDRK
KSKKRSRSRDKKRSRSKERHRSSSRSRDRAGRYKARKSPIRKRSKSRSPFKKEKSPVRQP
IDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEF
VESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSAGPMRLYVGSLHFNI
TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM
KVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQM
TGSIPFGGIPTPAVSIPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPNWASEIQDDVI
DECNKHGGVVHIYVDRNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTY
HNLFPDSVTAKQLLMPSRR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgattttgacgtcgaggccatgctggaagctccataccgaaaggatgagaac
aagtcctatcatgcaaatggacacgatgaacatggcaagaagaagagaaggagtcgaagc
aggagccgtagtccaggctcaaggaagaagaaaagtcgtagcaggagcaaagacaggaag
aagagcaagaaaaggagcaggagcagagataaaaaacgcagccgcagcaaggagcgccat
cgtagcagctccagaagcagagatcgcgctgggcggtataaagcacgcaaaagccccatc
cggaagcgctccaaaagtcgaagtcccttcaagaaagaaaagagtcctgttaggcaaccg
attgacaatctaacaccagaggagagggatgcccgtacagttttctgcatgcagcttgca
gcaagaatcagggctcgtgatctggaggatttcttctctgcggttggaaaggtcagagat
gtacgaataatttctgatagaaactctcggaggtcgaagggcattgcatacatagagttc
gtggagtcatcctctgtaccactggcaattggactaactggccagaggcttttgggtgtg
cccatcatcgtccaggcttcgcaggcggagaaaaatagggcagctgctgcagccaataac
ctacagaagggcagcgcgggtccaatgaggctgtatgtgggttcgcttcattttaacata
acagaagaaatgctccgagggatctttgagccctttggaaagattgaaggaatccagctc
atgatggacagtgagactgggagatctaaaggatacggcttcatatcgtttgcagatgca
gaatgcgcaaagaaggccttggagcagctcaatggatttgaactggcaggtcgtccaatg
aaggtgggacacgtcacagagcgctcagattcctctacagccagctctttcctggacaat
gatgaactggaaaggactggtatcgacctgggcacaacaggacgtttgcagctcatggct
agacttgcagaaggaaccggcctgaaaattcctcctgctgctcagcaggctctgcagatg
actggatccataccttttgggggcatacctaccccagcagtttccattcctgcaccgagc
caagccctgaacctcccctcacagccgctagccacacactgccttcagctctccaacctg
tttaacccacaagcagagaatgatcctaactgggcctcagaaatccaagatgatgttatt
gatgagtgcaacaagcacgggggagttgttcacatttatgttgacaggaactcacctcag
ggtaatgtgtatgtgaagtgtccctcaataccggcagcaatggcgacagtcaatgcactt
catggacgctggtttgcaggcaaaatgataacggctgcttatgttcctctaccgacctac
cacaaccttttcccagactctgtaacggcgaagcagcttctaatgccttcacgtcgatag
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integrated database retrieval system
