Cyprinodon variegatus (sheepshead minnow): 107097578
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Entry
107097578 CDS
T06110
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1 interacting and cysteine-rich containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107097578 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107097578 (rubcn)
Membrane trafficking [BR:
cvg04131
]
Autophagy
Other autophagy associated proteins
Others
107097578 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
CMD
Motif
Other DBs
NCBI-GeneID:
107097578
NCBI-ProteinID:
XP_015250254
Ensembl:
ENSCVAG00000014273
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MMEVTAEGEAEERRREQWKLLSSLKTTVEGLLSTNNPNVWSRYGGLQRLHKDMNNILGHR
LKNEQVYYKQRDYWPFVWCVRYITPHLAVHVEQFSHLEPVLSTGMHGAGESYKAERWLLH
SLQVHKLSAQLKPLLRHMGNTRKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDT
VGLSPLRGSPCFSLLKSQSLCVLPGAGGTWRKADASPGGDSLNRRLTTSNCSLREAVTAD
LSPADTTKCTTSPASRVETPWAFVSSLAEGERGVTPPPGSTSTPHIALTESPSSSVQPES
GDFCDGDSDDGPEYLAIGNLGQRSRCNSRSSTHSSEQDQKKEPCTQRGSLAPNPPRRSSF
SEGQKGPGRGAKGHTRSFSDTGISQKLRNGGGHRKITIIIEDPVAESASEDSSMAEYSPF
SPQRSDTSTPSSLYMDSCGPQYRGVPDGMFRKPSKGQSLISYLSEQDFGSCADLEKENAH
FSISESLIAAIELMKYNMLRREEAGVEEEGDSDSEIQQLKQKIRLRRQQIRRSRLPPCIT
SQRNFHSSDSGGSRRSSHDSFQGLSDSGSVEEVEECELQDGCEGQSLLAVSQNGLSLSLA
SLFSDADIKRSVSSSGRSFLSSESISPSFLQSNSAESVAMGLLRQFEGMQLPAASELDWL
VPEHDAPQKLLPIPDSLPISPDDGEHADVYKLRIRVRGNLEWAPPRPQIIFNIHPPPKRK
VIVAKQNYRCAGCGTKIDPDYIKRLRYCEYLGRYFCQCCHENAQVIVPGRVLRKWDFSKY
YVSNFARDLLSKIAGDPLFNPSDINSGLYKKIKSLESVRVLRVQLFHMKNLLRTCRFAKE
VLDLFDSLPGHLTEDLHLFSLNDLSAVRNGELAPRMKELLKLGTVHVAGCVLCQAKGFVC
EFCNNDKDIIFPFQLSKCQRCEGEPPPRSQSSRIPFQLNWRDWKIPNPRRLARALSRDRR
EGEGGEEGLHLGIDQGVKSGEQEEPREEPSNLSNSVETNWPLSSGNTANLVPWITGNEEQ
EEMSDREGQEENECKEGGDEPAGMERVSFLKVLQIDRLKQRIAKRDRSDHETCSSFESLD
EGGQEGKESNTMSAKTSKVKHFSKRDGEERGRESKKESGTKGFRIRSLVKSKEEEKAQTE
GVKAEKHPGLRLLRTHQLTGVFSKSTEEKEEESCESDGKINTGRGGTACGAEAKWRSRKT
RKARRVTKERKRRQSGGEEGGTTETDADNRSEGAGGQE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggttactgcggagggagaggcggaggagcgcaggagggagcaatggaagctg
ctgtccagcctgaagaccactgtggagggcctcctgtccaccaacaaccctaatgtctgg
tcgcggtacgggggcttgcagaggctccacaaggacatgaacaacatcctcggtcacagg
ctgaaaaacgagcaggtgtactacaagcagcgagactactggccttttgtttggtgtgtt
cgctacattaccccccacctcgctgtgcatgttgaacagttcagtcacctggagccggtt
ttgagcaccgggatgcacggcgccggggagagctacaaggccgagcgttggttgctgcac
agcttacaggttcataagctctcagcacaactcaaacctctgctccggcatatgggaaac
acccggaaatactacaacgatgatgccttcctactcagtgagcctcatgtgaccgccatg
tttcagtgtctggaagccgtggagcagaataaccccaaactgctggctcaagtagacacg
gttgggctttcccctctgaggggctctccatgcttcagtctgttgaagagccagagcctg
tgtgtgctgccaggggccggtgggacctggaggaaggcggacgcatcaccaggaggagac
tctttgaaccgcaggctaaccacgtctaactgctctctgcgagaagccgttactgccgac
ctcagccctgcagacactaccaagtgcactacctctccagccagcagggtggaaactcct
tgggcgttcgtgtccagcctagcggagggtgaacgcggtgtgacgcctcctcctggatcc
acttccacccctcacatcgctctaacagagtccccatcctcctccgttcagcccgaatcc
ggggacttctgcgatggcgactccgatgacggtccggagtatctggccatcggtaatctt
gggcagcgcagtcgttgcaattccagaagctccacccacagcagcgagcaggaccagaaa
aaggaaccgtgcacacagcggggttctctggccccgaatccgccaaggcgctcctctttc
tcagaaggccagaagggccccggcaggggcgctaaaggacacacccgctcgttttcagac
acggggatcagtcagaaactcaggaatggagggggccacagaaagatcaccataataata
gaggatccagttgcagaatcggcgagcgaagactccagcatggcggagtacagccccttc
tcacctcagcgcagtgataccagcacccccagttctctgtacatggactcttgtgggcca
cagtacagaggcgtaccagatgggatgttcaggaaaccgtcgaagggccagagcctcatc
agctacctgtcagagcaggactttggcagttgtgccgaccttgaaaaggagaacgctcat
ttcagcatctcggagtccctcatcgccgccattgagctgatgaagtacaacatgctgcgg
cgggaagaggcgggcgtggaagaggagggagacagcgactcagagattcagcagctcaag
cagaagatccgtctgaggaggcagcagatccgtcgcagccgcctgcctccctgcataacc
tcccagcgcaatttccactccagtgacagcggcggctccagaaggagctctcacgactcc
ttccagggcctgtccgactccggctcggtcgaggaggtggaggaatgtgaactacaagat
ggctgtgagggccagtccctgctggcggtgtctcagaacggcctctccttgtcactcgcc
tccctcttctcagatgctgatataaagcgcagcgtgagctccagtggcaggtccttcctg
agctcagagtccatctctccatccttcctccagtctaactcagccgagtcggtagctatg
ggtttactcaggcagtttgagggcatgcagcttcctgcagcttcagagcttgactggctg
gtcccagaacacgatgctccacagaagctgctgcctatccccgactccttgcccatctct
cctgatgatggcgagcacgcagatgtctacaagttgaggattcgagttcgaggaaacctc
gagtgggcgccgccgagaccacagattatcttcaacatccatcctcctccaaagaggaag
gttatcgtcgccaagcagaactaccgctgtgctggctgtggcaccaaaattgacccagac
tacatcaagcggctacgttattgcgaatacctcggccgttacttctgccagtgctgccat
gagaacgcccaggtcatcgttcctggccgagtgctcaggaagtgggacttcagcaaatac
tatgtaagcaactttgcccgggacctgttgagcaagattgccggggatcctctgtttaac
ccaagtgacatcaacagcggcttgtataagaagatcaaatctctggagtctgtcagggtt
ttgagggtgcagctgtttcacatgaagaacctcctgaggacctgtcggtttgccaaagag
gtactggaccttttcgacagcctgcctggccacctgaccgaagaccttcatctcttctcg
ctcaacgatctctctgctgttcgcaacggcgaactggctcctcgaatgaaagagctgctg
aagcttggtaccgtgcatgtggccggatgcgtgctgtgtcaggcaaagggttttgtgtgc
gagttctgcaacaacgacaaagacatcatcttccccttccagctgagcaagtgccagcgc
tgcgaaggtgagccacccccaagatcccagtcctcccgcattccctttcaactaaactgg
agagactggaagatcccgaatccccgtagactggcgagggcgctctccagagacaggaga
gaaggggagggaggggaggagggcttgcatttggggatagatcagggggtaaagagtggg
gagcaggaggaaccgagggaggagcccagcaatctttccaatagcgtagagaccaattgg
cccctaagttctggaaatactgcaaatctagttccctggattacaggaaatgaggagcag
gaggagatgtctgacagagaaggtcaggaagagaatgaatgtaaagaaggtggagatgaa
cctgcaggaatggaaagagtgagttttttaaaggttctgcagatagacagattaaagcaa
aggatcgcgaagcgagacagaagtgatcatgaaacatgcagcagctttgagagtttggat
gaaggaggacaggaggggaaagaatccaatacgatgtctgcaaagacaagtaaagtaaaa
catttctcgaaaagagatggcgaggagcgagggagagaatcgaaaaaggaatctggaacg
aaagggttcagaataagatcactggtaaaatcaaaagaggaagagaaagctcagacagag
ggagtgaaagctgaaaagcatccgggcttaaggttactgaggacacatcagctaacaggt
gtgttcagcaaaagcacagaagagaaggaagaagagagctgtgaaagcgacgggaaaatt
aatactggccgggggggcacggcgtgcggagcagaggctaagtggagaagtagaaaaacc
cgtaaagccaggagagtcactaaagagaggaagaggaggcagagcggaggggaggaaggg
gggacaacagagactgatgctgacaatcgttctgaaggagctgggggtcaagagtag
DBGET
integrated database retrieval system
