Cyprinodon variegatus (sheepshead minnow): 107097584
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Entry
107097584 CDS
T06110
Name
(RefSeq) uncharacterized protein LOC107097584 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107097584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107097584
Membrane trafficking [BR:
cvg04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
107097584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
107097584
NCBI-ProteinID:
XP_015250266
LinkDB
All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
MSSLTVEEEDQKWEPTHVQVTVLKGRGLRGKGKHGTSDVYTIIQLGKEKYSTGVAEKTTE
PEWREECSFELLPGALERGGSNELVLTVMHRALIGLDVFQLDKLFHESRYVKNEWYRLNS
KTGKKEKERGDIQVTIQFTRNNLTASMYDLVMKDKGASTFSKLKERMKGKRRSSDDDSSS
AVVQGGYSTLHRMRHRLPSDGGGEEDYEDDEGGEVRRSKMRTFFLRGKLRKSSDTRSSTS
LGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPEHTANTSPKSSSLRCD
YGDEAGEITIAVPTVCVNGSHAYKNQAQDRGSGKSAGTLGLGLLQKSMPHSVSLQNLSTR
SFTDLPKGPGGDGRRWSFDRAGEEEKAAIAAALEKSGPMLGEEEERPEQASLPKASKAES
ENQVKKQRKNLFSHGRSESAGKGQSQSKDVSEQISAATEERHRAWFGSKESHNKPSLVVS
TKLEPSTYPHPTPLPLTRHPLGAPVDPTSLVSTLHHTNPFCCTQSTPPPLPWCNPFYSLL
QHNPFFTDMLTNEPLNSSLPPLPYLSSSRPPITDLFPKSSDSNLTQDDASVGATDTTMEA
KGKLEKRPLPPIPLEREKPLIEKSANPFMSADELELGSQWEESFDAFAAGRLQSPEDLTM
EYRTQQNTVSDHPLEHDHNKGELQSHPDADDRTNVNNTLYHQPGDRFFSSALSVPSQLKN
NNTHIIDTFPPFLETIPEQRSFESDDSTLNTPTNSPELWDFQVAAQDKNIPNDFSDTNVN
KAPFNISSAQINENNSSPDPSSSGLGSSTEEDGLSCFSSQSEKFSAVSSEEAEGNIPRIK
TPSDSAVVENVKTSESGDSLNDRSGNQPLLDDANQTVIQQEESPGQKVVFDFLDESLQTP
PPTLMASEQEAESEHEDNQTPKTFSMSPDLLSTLQPTSPLPQQSTDGLKEESTDLTVEPS
DEFNPFSKNSTEGVIPGSPEDEFSSTLPSVHVTTSSPDVKHDSSDLTIEKTSSGGQEANS
YAHVDLGIFDNFLNISRIASTPEQDSTLLPVQSDYSSNSLLHSHYFSTDSQDYLTCDSQP
LSKWSSFSELNGTLFSANSTLCVEMGDVKADPFEPLGTDNTNLSQTSNFEINQNKTFEES
LFGDQGKAVDLESSLTVGDGLQGLLAPLPGMSYNPQILSEVGEENQDDFLLKCPEGQHAT
LQRSHSEGTLTPAIEQQLLPSFGSDPCTIQESFLAQPGPNFPSPNPFAPSLTPESSSFHV
ALPTHPPFATVSATVPPSSAQGAVPNPDVTEQLQAANPPCSPHPVKPLTTAMVAEEKRSV
LATGLEKLKSTIHPGRSSQITEQEADNKKSLTEGAGSYYHLTHSELVALLVQREAELERQ
KAEFERQKLLLAKREVELKKLKPQVRDLEDYIDTLLVRIMEQKPTLLQVRSKLK
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcactaaccgtggaggaggaggaccagaagtgggaaccgacgcacgtccaggtg
acggtgctgaaaggcaggggcttgcggggaaagggcaaacacggcaccagcgatgtgtac
accatcatccagctggggaaggagaagtactcgaccggcgtggcggagaagaccaccgaa
ccggagtggagggaggagtgctcgttcgagctgctgcccggcgcgctggagcgcgggggg
agtaacgagctggtcctgaccgtgatgcaccgggcgctgatcgggctggatgtgttccag
ctggataaactattccatgaaagcagatacgtaaaaaacgaatggtatagactcaactcc
aagacgggaaagaaagagaaggagaggggagacattcaggtcaccatccagttcaccaga
aacaacctgacggccagcatgtatgacctggtcatgaaggacaagggagcctccaccttc
agcaaactaaaggagcgcatgaaggggaagaggagatctagcgatgatgactcttcttca
gctgtagtgcaaggcggatacagcaccctgcacaggatgcgccacagactgccgagtgat
ggcggaggagaggaggactatgaggacgatgaggggggtgaggtccggcggagcaagatg
aggaccttctttttaagagggaagttacggaagtcatcagacactcgctccagcacctct
ctgggctctgagagcagcgagtcgtcgtcgcggggtgggagcctcagtccgaccgctgga
atcagtgtggtggtgtcggacctgtccaactcccccagcaacagcagcaacttaactgca
gacaacagtccagaacacacagcaaacacgtctcctaaatcatcctctctcagatgtgat
tatggtgatgaggctggcgaaatcaccattgcagtgccgacggtttgcgttaatggaagc
catgcatacaaaaaccaggcccaggatcgaggctcaggaaaatcagcaggtactttaggc
ctgggactgttgcagaagtcaatgccccactccgtttcactgcaaaacctcagtaccagg
tccttcacagacctgcccaaaggccccggtggagacgggcgtcgctggtcttttgacagg
gctggcgaggaggagaaggcagccattgcagcagccctggagaaaagtggccccatgctg
ggtgaagaagaggagcggccagaacaggcatcactgccaaaagcttctaaggcggagtcg
gagaatcaggtgaaaaagcagaggaagaacttgttctcacatgggcggagtgagtctgca
gggaagggtcagagtcagtccaaagacgtgtctgaacagatctcggctgccaccgaggag
agacacagagcctggttcggatcaaaggagtcgcacaacaaacccagcctggtggtctcc
actaaattagagccaagcacttacccccacccaacacctcttccacttactcgccacccc
ttgggtgcccctgttgatcctacctctttggtttccacacttcaccacactaaccccttt
tgctgcacacagagtacaccaccccccttaccctggtgcaaccctttctactccctccta
cagcacaaccccttctttacagatatgttaaccaatgagccactaaattcttcgctacct
cctttgccttatctttccagctcccggccccccataactgatctctttccaaagtcaagt
gattccaatctgacccaagatgacgcatcagtaggggccactgacactacaatggaggca
aaaggcaaacttgagaaaagaccacttcctccgattcccttggaaagagagaaacccctc
attgaaaaatcagcaaacccctttatgtctgctgatgagcttgaactgggatcacagtgg
gaagaatcctttgatgcatttgcagctgggaggctgcagtctcccgaggacctcaccatg
gagtacagaacacagcaaaatacagtcagtgaccatccactggaacacgaccataataaa
ggggaattacaatcccacccagatgctgatgaccgcacaaatgttaacaacactctatat
catcagcctggggacaggtttttctccagtgcactttcagtccccagccagttaaagaat
aataacacacatattattgatactttcccgccattccttgaaacaattccagaacaaaga
agctttgaaagtgatgactcaaccttaaatactcccactaactctcctgaactgtgggat
ttccaagtagctgcacaagacaaaaatattcccaatgatttctctgacactaacgtcaat
aaagctcccttcaacatctcatctgctcaaatcaatgagaacaacagttctccagacccc
agctcctccgggctcggcagttcaaccgaagaagacggcctctcctgcttttcatctcag
tctgagaagttttctgcggtctcctcagaagaagctgaaggcaacatcccacgcatcaaa
accccatctgattcagctgtggttgaaaatgtaaagacctctgagtcaggagacagtctc
aatgacaggtcaggcaatcagcctttacttgacgatgccaatcaaacggttattcagcag
gaggagagtcccggacaaaaggttgttttcgacttcttggacgagtctcttcagactcca
ccaccaactcttatggcatctgaacaggaagcagaaagtgaacatgaggacaatcaaaca
cctaaaaccttttcaatgagccctgatctgttgtcaacactacaaccaacatcccctcta
cctcagcaatcaactgatggcttgaaagaagaaagcacagatttgactgtggagccatct
gatgagttcaaccctttttctaagaatagcactgaaggagttatccccggatctccagag
gatgaattttcttcaacactaccatcagtacacgtcacaacctcatcccctgatgtcaag
cacgattcctcggatttgacgattgagaagactagctcaggggggcaggaagctaactca
tacgcccatgttgatttggggatttttgataatttcctcaacatcagtcgcattgcaagc
actcctgagcaggacagcactttgttgccagtacagtctgattatagtagcaacagctta
ctccatagccattatttcagcactgactcgcaggattatctgacctgtgactctcaaccg
ctctccaaatggtccagcttttcagagctaaatggaaccctgttctcagccaactcaact
ctctgtgttgagatgggtgatgttaaggcagacccctttgagcctctagggacggacaat
acaaatctatcccagacttccaactttgagatcaaccagaacaagacatttgaagaatcc
ctctttggggatcaaggcaaagcagtagatctggagtcaagcctcacagtgggggatgga
ttacaaggtttgcttgccccactgccaggcatgagctataatccacagatcctcagtgaa
gtaggggaggaaaatcaggatgacttcctcctaaaatgtccagagggacaacatgctaca
ctacagcgctcccattccgaggggaccctcacccctgccattgaacaacaactcctaccc
tcttttggaagtgatccctgcacaatacaggaatccttcttagctcaaccaggccccaac
tttccttctcctaacccctttgctccttctctaactcctgaaagcagtagcttccatgta
gcgctccccacccaccctccctttgcaaccgtttcagcaaccgtgccgccgagctcagca
cagggtgccgtgccaaacccagatgtgacagagcagctgcaagcggcaaatccgccgtgc
agcccccacccggtgaagcccctgacaactgccatggtggctgaggagaagcggtcagtg
ctggccacgggcctggaaaagctaaagtccaccattcatcctgggaggagcagccagatc
actgaacaggaggcagacaacaagaagtctctgacagaaggagcaggctcgtactaccac
ctgactcacagcgaactggtggccctgctggtgcaacgtgaggccgagctggagaggcag
aaggccgaattcgaacgtcagaaactcttactggccaagcgggaggtggagctgaagaag
cttaagcctcaggtccgagacctggaggactacattgacaccctcctggtgcgcatcatg
gagcagaagcctacgctgctgcaagtgcgctccaagttgaaatga
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