Cyprinodon variegatus (sheepshead minnow): 107097700
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Entry
107097700 CDS
T06110
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107097700 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107097700 (dhx15)
03009 Ribosome biogenesis [BR:
cvg03009
]
107097700 (dhx15)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107097700 (dhx15)
Spliceosome [BR:
cvg03041
]
Complex A
U2 snRNP components
U2 related factors
107097700 (dhx15)
Complex B
107097700 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107097700 (dhx15)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
90S particles
Helicases
107097700 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
Atrophin-1
AAA_25
nSTAND3
AAA_29
AAA_7
Motif
Other DBs
NCBI-GeneID:
107097700
NCBI-ProteinID:
XP_015250440
Ensembl:
ENSCVAG00000011673
UniProt:
A0A3Q2CVB0
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYSSNKKRSDGRDRDRDREREDRPRDRDRDRDRDRDRDRERDSKSSAAP
SNSLPSVSGFPPIKQMAVNQQINPYTNLPHTPRYYEILKKRLQLPVWEYKESFSDIITRH
QSFVLVGETGSGKTTQIPQWCVDMVKALPGPKRAVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRQDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHA
FKQNHEANQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRAL
CTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLERIIAKLESKEYTQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagacatcgtctggatttaggtgatgattactcctccaataagaagcgctct
gacgggagagaccgagaccgtgacagagagcgcgaggaccgtcctagggacagggatcga
gacagagatcgggaccgggacagagaccgggaaagggactcaaagtcatcggcagctcct
tctaacagccttccgtctgtgtcaggttttcctccaatcaagcagatggcggtgaatcag
caaatcaacccatacaccaatctgccacacacgccccgctactatgagatactgaagaaa
aggctgcagcttccagtatgggagtacaaagaaagcttcagcgatatcattacacgccac
cagagctttgtccttgttggagagacagggtctggaaaaacaacacagatcccacagtgg
tgtgtggacatggtgaaggccctgcctggtccgaagcgggccgttgcttgtactcagcca
aggagagtggctgccatgagtgttgctcaaagggttgcagatgaaatggatgtcatgctt
gggcaggaagttggctactccatcagatttgaggactgcagttcagctaagactatacta
aagtacatgacagatggtatgctactgagagaagccatgaacgaccccctgctggagcga
tacggcgtcatcattctggatgaggcccacgagcgaactctagctacagatatcctgatg
ggtgtgttaaaggaagtggtccgccaaagacaggatctgaaggtaattgtgatgagcgct
accctggatgcaggaaagttccaagtttactttgacaactgtcctctgctgaccattcct
gggcggacccatcctgtagagatcttctacacccccgaaccagagcgggactaccttgag
gcggccattcgtaccgtcattcagatacacatgtgtgaggaggatgaaggggacgtcctt
ctgttcctcacaggtcaagaggaaattgatgaagcctgcaaaagaatcaaacgagaagtt
gatgaccttggccctgaagtcggagatatcaaaatcattccactgtattccacattgccc
ccacagcaacagcagaggatctttgagccccctcctccaaggaagcccaatggagctata
gggaggaaggttgtggtatcaacaaatatagctgagacttctttaacaattgatggtgtc
gtgttcgtcattgaccctggattcgctaaacagaaggtgtataatcctcgtatcagagtg
gaatctctgctggtcacagccattagtaaagcctcagctcagcagagggcaggaagagct
ggcagaacacgtccagggaaatgtttccgcctctacacagagaaggcctataaaacggag
atgcaggataacacctacccagagatccttcgttccaacctggggtctgtggtgctacag
ttgaaaaagttaggaatcgatgatctcgttcactttgacttcatggaccctcctgctcct
gagaccttaatgagggcgctggagctgctgaactatctggctgctctcaatgatgatggt
gacctgactgagcttggctctatgatggccgaattcccactggatcctcagctggcgaag
atggtcatagcaagctgcgagtttaactgctccaatgagatcctctctatcactgccatg
ctgtcagtcccacagtgttttgttcgtcccacggaggctaagaaggcagcggacgagtcc
aagatgaggtttgctcacattgacggggaccacttgacgctgctcaacgtctatcatgcc
ttcaaacaaaaccatgaagctaaccagtggtgttacgacaactttgtcaactaccgctct
ctgatgtctgctgacaatgtacgtcagcagctgtccaggatcatggaccgcttcagtctg
cctcggcggagcacagagttcaccagcagagattactacatcaacatccgtcgggccctc
tgcaccggctttttcatgcaggtggctcatttggagcgcacaggccattacctcacagtg
aaagacaaccaggtggtccagctccatccatccacagtcctggaccacaagcctgaatgg
gtgctctacaacgagtttgttctcaccaccaagaattacatccgaacttgcacagatatc
aaaccagagtggttggtgaagattgcaccccagtactatgacatgagcaactttccacaa
tgtgaagctaaaagacagctggagcgaattattgccaaactggagagcaaagagtacact
cagtactga
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integrated database retrieval system
