Cyprinodon variegatus (sheepshead minnow): 107097728
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Entry
107097728 CDS
T06110
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107097728 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107097728 (rexo1)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
Pre-60S particles
RNases
107097728 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
107097728
NCBI-ProteinID:
XP_015250477
Ensembl:
ENSCVAG00000010852
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MLRTTGFFRGIDCPFYSDYDGGKGGRNGCNRPYCHFRHSRQSRPSYGDIKKLQSGQKDQG
YDPFNPEVVRPQEQQNGKPAPSGDISGALEMVNRAIEEVRSEVERERQRLSRMGDEPYSP
TEKTCSPSPEAVKSQPPTSHLAYDPGSYRITSGGYEPTPGCSKYTLDSDDQGHNSNSMEY
VPTSMKKPQSRTQIPSPPQSPKYMNSTSSAKCKYTLDNSKPSTDMEYDPLSNYTAGIAVK
TKKEEGSHPGKTDHKTHKLTGTDNPDCVGKKPQLTSIDLKKYTISDSDGESSGTEYRPTS
LSNLQQRKANIMSAREALENEAKDRSKSIKGALTQRNKEELSQDLDSQEKNKQKEKVQKK
KVGDQSVGSKSSKHEKTQTTDKNMKTSLGVKSSSGSSSCTKDKGSVKNCKQDSAKKENKS
QKKDDGKNRVKVKASLQVQREGRDEKKCDGKNKTVEKVKRDLSQQDRDVRESKKQKTSER
EKEKDQSKHRNGKLDGSQKEKDIKKSKSSSGSCKGSSAKVKQNTSLSKKKPEDKSLSLSH
SDLFGDESPEEAEPMEADYDEESEEDLVRKSAAALKRGRLNKRKASERTPSSSEDEADRH
LERSESTWEEPDSVRVDFSVFQDDLDFESDPMEECLRIFNESNDVKKEDKGRQGKQASRD
SEEERITDGTLTTVYPGQKKRVSHFVAKGDTDAPSKTVVRPYKRPTPQEVCFQRMQLAQQ
QAAQLSASVKAASQSSASNLPGEKKRIAHRPNPQLASTKTTGPAHGKPAVGEPPQGVKSQ
TTAGILSKTSSTMLQKRTAHTPTMKSTSMKRPVIPTEFGAKVPTNIRQRYLNTFIDECVK
FCPSEEAAFRMALDEEKLVYDRSSSKNIYLNVAVNTLKKLRGKSGSSSSPVTKDAGIAAK
RRAQSHEEVLGGRHAATTSFTVNRSGKQQEEKLFGANLYRKLKAYLMTEEQLQEHGYPRP
NPEASGRAIIHNLPEKKISPDPFNKICCRCGAEYKINVNGSCIRKEECSYHWGRLRRNRV
AGGWETTYSCCSAAVGAPGCQIGKQHVQDGRKESLDGFVSTFSKPLPVDGNGGVFALDCE
MCYTKQGLELTRVTVIDSEMKVIYDTFVKPESKVVDYNTRFSGVTEEDLVNATITLRDVQ
AVLLSMFRAESILIGHSLESDLLALKLIHSSVVDTAIVFPHRLGLPYKRALKNLMADYLK
RIIQDNVEGHDSSEDASACMELMIWKIREDAKVKR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggaccaccggcttcttccgagggattgactgtccgttttattcggactacgac
ggcggcaaaggcggtagaaatgggtgtaacagaccgtactgtcacttcaggcacagccgg
cagagtcggccgtcctacggagacattaaaaagctccagtccggacaaaaagaccagggt
tacgatcccttcaacccagaagtagtgcgaccacaggagcagcagaatggaaagccggct
ccatcaggagacatcagcggcgctctggagatggtcaacagagccatcgaggaagtccgc
agcgaggtggagcgagaacggcagaggctttctcgcatgggagacgaaccctacagccct
actgagaagacctgttctccttcacctgaagctgttaaaagtcaacctcccacctcacac
ctagcttatgatcctggaagctaccggatcacatcaggggggtacgaacccaccccaggc
tgcagcaaatacaccttagattcagacgatcaggggcacaacagcaactccatggagtat
gttcccacgtcaatgaaaaaaccccagtcccgcacacaaatcccctccccgccccagagc
ccgaaatacatgaacagtacatcctctgcaaagtgcaaatacactctggacaattctaaa
ccgtctactgatatggagtacgaccctctgtctaactacactgcaggtatagccgtgaaa
accaagaaagaggaaggttcccatccaggtaagacggaccataagacacacaagctaacg
gggactgacaacccagattgtgttggaaaaaagccccagctgacgagtattgacttaaaa
aagtacaccatctccgactctgatggggagagttctggaacagagtatcggcccacatcg
ctgagcaatctccagcaaagaaaggccaacattatgtctgctagggaggctttagagaac
gaagcaaaagacagaagcaagagtataaagggtgcacttacacagaggaacaaggaggag
ctttcacaggacttagacagccaggaaaaaaacaaacaaaaggagaaggtgcaaaaaaag
aaggtgggagaccagagtgttggcagtaaaagcagtaaacatgagaaaacacaaacaacc
gataagaacatgaagacatcgttgggagttaaaagtagcagcggcagctccagttgtaca
aaagacaaaggatcagtaaagaactgcaaacaggactctgctaagaaagagaacaagagt
cagaagaaagacgatggtaaaaacagggtaaaggtgaaggcatcgcttcaagttcagcgg
gaaggaagggatgaaaagaaatgtgacggtaagaataagacggtggaaaaagttaaacga
gacttaagtcaacaagacagagatgtacgagaaagtaaaaaacagaaaacatcggagcga
gagaaagaaaaagaccaaagcaagcatagaaacggcaaattggacggaagtcaaaaagaa
aaggacatcaagaaaagtaagagcagctccggcagctgcaaggggagctcggctaaagtg
aagcaaaacaccagcttgtcaaaaaagaaaccagaggacaaaagtctgagtctaagccac
agcgatctgtttggtgacgagagcccagaggaggccgaacccatggaggcggactacgac
gaagagtccgaggaagatctggtgaggaaatcagcggccgcgctaaagaggggtcgtcta
aacaagaggaaggcttcagaacgcacaccgtcttcctcagaggacgaagccgaccggcac
ctggagcgcagtgagtcgacatgggaggagcctgacagcgtcagagtcgacttttccgtg
tttcaggatgatctggattttgagtccgacccgatggaagagtgtttgcgcatcttcaat
gaatccaacgatgtgaagaaggaggacaagggaagacaaggaaagcaggcatccagagat
tcagaggaggagaggatcacagatggcactttaaccaccgtctaccccggccagaagaag
agagtttcccattttgttgccaaaggagatactgatgcaccttcaaagactgtggtccga
ccttacaagagacccacacctcaggaggtctgcttccagcgcatgcagctggctcagcag
caagccgctcagctctcagcctcagtcaaagctgcttcacagagctccgcctccaacctt
cctggagaaaagaagagaatcgctcaccggcccaatccacagctggcatccactaagacg
acaggtccagcacatggaaaaccagctgtgggtgagccccctcagggggtgaagagccaa
accacggctggcattctgtccaagacctcatctacgatgctgcagaagaggacggctcac
acacccaccatgaagagcacctccatgaagcggcctgtcattcccactgagtttggggca
aaagttcccaccaacatccgccagcgctacctcaacacttttatagacgaatgtgtgaag
ttctgcccgtcggaggaggctgcatttcggatggccctcgatgaggagaagcttgtgtat
gatcgcagtagcagtaaaaacatctacctcaacgtcgctgtgaacacgctgaagaagctg
cggggcaaaagcggctcgtcttcgtcgcctgtcaccaaggatgctgggattgcagcaaaa
agaagggctcagtcccacgaggaggttctgggtggccgccacgcagccacaaccagcttc
actgtcaacaggtcgggtaaacagcaggaggagaaactgtttggagctaacctatacagg
aagctgaaggcctacctgatgacagaggaacagctgcaggagcacggatacccgaggccg
aacccagaggcctctggaagggccatcattcataaccttccagagaaaaagatcagtcca
gacccgttcaacaagatttgctgtcgctgtggtgcagagtataagatcaatgttaacggc
agctgcatacggaaagaggagtgtagctaccactgggggcgtttacgcaggaaccgagtc
gctggaggctgggagaccacatacagctgttgctcagcagctgtgggagctcctggatgc
caaattgggaaacaacacgttcaggacggccgtaaggagtccctagatggctttgtgtca
acgttcagcaagccgctgcctgtggatggaaacggaggagtgtttgctttggactgtgag
atgtgttataccaagcagggtctggagctgaccagagtgacagtcatcgactcggagatg
aaagtaatctacgacacctttgtcaagccagagagcaaagtagttgactacaacacgcga
ttctctggcgtcactgaggaggacttggtgaacgccaccatcactctgagagatgtccag
gctgtgctgctcagcatgttcagggccgagtccatcctcatcggtcacagtctggagagc
gacctgctggcgctgaagctcatccacagttcggtcgttgacaccgccatcgtgttccct
caccgcctcggtctgccctacaaacgtgccttgaagaacctgatggccgattacctcaaa
cgcatcatccaggacaatgtggaaggccacgattccagtgaggatgcgtccgcctgcatg
gagctgatgatctggaagattagagaggatgccaaggtcaagagatga
DBGET
integrated database retrieval system
