Cyprinodon variegatus (sheepshead minnow): 107097742
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Entry
107097742 CDS
T06110
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107097742 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107097742 (hdac5)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107097742 (hdac5)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107097742 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
O_Spanin_T7
Motif
Other DBs
NCBI-GeneID:
107097742
NCBI-ProteinID:
XP_015250505
Ensembl:
ENSCVAG00000010474
UniProt:
A0A3Q2E2F9
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MLVHPTVTGLCTMLQTIYETESCFSTGSTDSRHKPLELLNGSRGTGADMTAAVLEVNSSL
PSGMQSPVEETSEQRGGGGEGGGGSGEGPGGGGCPVDLRTEPRVGSLSGGGAVDTTLREQ
QLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKRQQEMEH
KRKLEQQRHEEQEKQRMEQQLLLLRNKEKSKESAIASTEVKLKLQEFLLSKKEPGPGGLN
HSFSPKCWGGQHTSLEQSSPPQSNTPGTPPSYKLPSLLGNYEGKDDFPLRKTVSEPNLKV
RSRLKQKVAERRSSPLLRRKDGTVISAFKKRAIEISVSTLCNSAPGSGPSSPNSSNTAIA
NGNTGSVPNIQTELRSLHQTLGADGTLSHLSLYTSPSLPNISLGLPANTHITAPQKLTNQ
QEAERQAIQSLRGGGALTGKFLSTSSIPAGAAHDVETPPPNSHSAHSSLLQHVLLLEQAR
QQTAMLGPMYNQSPLVTAERGVSTGMRPITKLPRHRPLARTQSAPLPQSPQALQQLVVQQ
QHQHFLEKHYKMLSKGGDLPRPPPTHPEEIEEELTENNDMQEDEGAGQHRLQKEGSDDSS
HSSERIGVHIKGEEEPRIMHVKGDSTESELDEDEEDDDVIQLRESEEEERGSYMQQSLQH
LSVFSSSLPHRPLGRAKSSPASAVNPIKHLFTTGLVYDSLMLKHQCVCGNAHIHPEHAGR
VQSIWSRLQETGLLSRCERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGP
ISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFKVAAGELKNGFAVVRPP
GHHAEESTAMGFCFFNSVAITAKLLQQKLGVEKILIVDWDIHHGNGTQQAFYNDPNVLYI
SLHRYDDGNFFPGSGAPEEVGSAAGVGFNVNIAWTGGVEPPMGDVEYLTAFRSVVMPIAQ
QFSPDVVLVSAGFDAVEGHQSPLGGYNVSAQCFGKLTQLLMGLAGGRVVMALEGGHDLTA
ICDASEACVSALLGDLCDSGFQWPPEKPCPKACASLERVIEIQSKHWPCLQSLSQTSGQS
LLAGSPGAQGQSERDEAETVSAMASLSVDVEQPCSVPESKETSRSTEEPMEEEPVL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgcatcccacagtgacaggattgtgcaccatgctgcagaccatctatgagact
gaatcctgtttttccactggcagcacagacagccgccacaagcctctggagctcctcaac
ggcagcaggggcactggtgctgacatgactgctgctgtcttggaggtaaatagcagccta
ccatcaggtatgcagagcccagtcgaagaaacaagtgagcaacgaggaggcgggggggaa
ggcggtggtggttctggagaaggcccaggtggaggtggatgcccagtcgacctgagaaca
gagcccagggtggggtctctgtctggtggcggagcagtggacactaccctgagagagcaa
cagcttcagcaggagctggtgctcctcaaacagcagcaggaactccagaaacagctgctg
tttgctgagtttcagaaaaaacatgaagtgttgacaagacaacatgaggttcagttacag
gagcacctaaagcaacaacaggagctgctggcagcaaaacggcaacaagagatggagcac
aaaaggaaactggagcaacaaaggcacgaagaacaggagaaacagagaatggaacaacaa
ctgttgctgctgaggaacaaagagaaaagcaaagagagcgccattgccagcacagaagtc
aagctaaagctgcaggagttccttctcagtaagaaagagcctggtccaggaggactcaac
cattccttctccccaaagtgctggggaggccagcacacctcattggagcagagctctcca
cctcagagtaacacccccggaacccctccctcctataaactcccctctctgctcggcaac
tatgagggtaaagatgacttccctctcagaaagacggtctcggagccgaatctgaaggtc
cgctccaggttgaagcaaaaagtggctgagaggcgtagctccccgctcctgcgcaggaag
gacggaaccgtcatcagcgccttcaagaaaagggccattgagatatcagtttccaccctc
tgtaatagcgctccaggttcaggtcccagcagtcccaacagttccaacacagcgatcgcc
aatggcaacacgggatcagtccccaacatacagactgagctgagatctcttcatcagact
ctgggggctgatgggacattgagtcatcttagcctctacacttcaccctccctacccaat
atctccttaggccttccagccaacacacacatcacagcacctcagaagctgaccaatcag
caggaggcagaacgtcaggccatccagtccttacgagggggcggagctcttacgggaaag
ttcctctcaacttcttccatacctgcaggtgctgctcatgatgtggagactccgcccccc
aactctcattcagcccattcctcattgctgcaacatgtcctgctgctggagcaggcccga
caacaaacagctatgctcgggcccatgtacaatcaatcaccactggttactgcagaaaga
ggcgtcagcactggaatgcggcccatcaccaagctgccccggcatcgaccattggctcgc
acacaaagtgctcctttaccccagtcaccccaggccctgcagcagctggtagtccaacag
cagcaccagcacttccttgagaaacactacaagatgttatcaaaagggggggacctccct
agaccaccacccactcaccctgaggagatagaggaggagctaacagagaacaatgacatg
caggaagacgaaggggcggggcaacacaggctgcagaaggagggatcagatgacagcagc
cattcatctgagcgaataggtgtgcacataaagggggaggaggagcccaggataatgcat
gtaaaaggcgacagcacggagagtgagctggatgaagatgaggaagatgatgatgtcatc
cagctaagagagagcgaggaagaggaaaggggcagctacatgcagcagtctttgcagcat
ctgagtgtgttttcgtcctcgctgccccacagacctctgggaagagccaagtcgtcccct
gcatccgctgtcaatcccatcaaacacctcttcaccaccggattggtatatgatagccta
atgctgaaacatcagtgtgtgtgtggtaacgctcacatccaccctgagcatgctgggagg
gtccaaagcatctggtccagactgcaggagactggtttactgagtcgctgtgagaggatt
cgtgggagaaaagcgtctctagatgagatccagtcggtccattcagagttccataccttg
ctgtatggaactagcccgctcaatcgtcacaaactggaccacaaaaagcttttgggtcct
atcagccagaagatgtatgctgttcttccctgtggggggataggggtggacagtgacacc
gtgtggaatgaaatgcactcatcagcggcagtccgcatggcagtcggctcagttattgag
ctggcctttaaagtggctgcaggggaactaaagaacggctttgcagtcgtgcgtccacct
ggtcaccatgctgaggaatccacagccatggggttttgtttcttcaactcagtagccatc
actgccaagctgctgcagcagaagcttggagtggaaaagatcctgattgtggactgggac
attcaccatggcaacggcacccagcaggccttctacaatgatccaaatgttctctacata
tctctgcatcggtacgatgatggaaacttctttcctggcagtggagcaccagaggaggta
ggctcagcagcaggagttggatttaatgtaaacatagcatggactggaggggtggagcct
cctatgggtgatgtggagtacctcactgccttcaggagtgtggtaatgcccatcgcccag
cagttcagtcccgatgtggtcctggtgtcggcaggctttgatgcagtggaaggtcatcaa
tctcctctggggggctacaatgtttctgcacaatgtttcggtaagctgacgcagctgcta
atgggactggcaggagggcgagttgtaatggcactggaaggcggtcatgacctcactgct
atctgtgacgcttcagaggcctgcgtttctgcactcctcggagatctgtgtgactctggg
tttcagtggcctccagagaaaccttgtccaaaggcttgtgcctccctggagagagtaata
gaaatccagagcaaacactggccgtgtctccagagcttgtctcaaaccagcggccagtcc
ctccttgcagggtcaccaggggcccagggccagtctgagagggatgaggctgagacggtc
agcgccatggcctcactgagtgttgatgtggagcagccatgttcagttcctgaaagcaaa
gaaaccagcaggtcaacagaggagccaatggaggaagagcctgtcttgtaa
DBGET
integrated database retrieval system
