KEGG   Cyprinodon variegatus (sheepshead minnow): 107097758
Entry
107097758         CDS       T06110                                 
Symbol
tceb1
Name
(RefSeq) transcription elongation factor B polypeptide 1
  KO
K03872  elongin-C
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107097758 (tceb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107097758 (tceb1)
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107097758 (tceb1)
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     107097758 (tceb1)
   Cul5 complex
     107097758 (tceb1)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107097758 (tceb1)
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 107097758
NCBI-ProteinID: XP_015250523
Ensembl: ENSCVAG00000009928
UniProt: A0A3Q2E1Y2
LinkDB
Position
Unknown
AA seq 112 aa
MDGEERTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEV
NFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq 339 nt   +upstreamnt  +downstreamnt
atggatggtgaggagagaacctacggtggctgtgaagggccagatgccatgtatgtgaaa
ctcatctcctcagatggccatgagtttattgtgaaaagagaacatgccttgacatctgga
accatcaaagctatgttaagtgggccaggtcagtttgcagagaacgaaaccaatgaggtg
aacttccgggagatcccatctcacgtcctttccaaggtctgcatgtattttacctacaag
gtccgttataccaacagctccacagaaatccccgagttccccatcgctcctgagattgct
ctggaactgctcatggctgcaaactttttggattgttaa

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