Cyprinodon variegatus (sheepshead minnow): 107097832
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Entry
107097832 CDS
T06110
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040
Spliceosome
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107097832 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107097832 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107097832 (snw1)
Spliceosome [BR:
cvg03041
]
Complex B
Other components
Prp19-related factors
107097832 (snw1)
Complex C
107097832 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
107097832
NCBI-ProteinID:
XP_015250632
Ensembl:
ENSCVAG00000012161
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSLTSFLPAPTQLSQDQLEAEERLRAQKSHSTALVSSRRDPPPYGQRKGWVPRALEDFGD
GGAFPEIHVAQFPLEMGRRKKTSNALAVQVDAEGKIKYDAIARQGQGKDKVIFSKYTDLL
PKEVLKDDSQELQRPDEEAVKELTEKTRSALEKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDQRAGIKSHGDKGGEDGEARERDMIRHD
RRKDRQHDRNISRAAPDKRSKLQRDQDRDISELIALGKPNPRTSSEAQYDQRLFNQSKGM
DSGFAGGEDETYNVYDQPFRSGRDMAANIYRPSKNIDKDAYADDFDSLMQNNRFAPDKEF
SGADHGQRREGPVQFEEDPFGLDKFLEQAKQHGGSKRPSTSNRSKDDYHDKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttacgagctttttaccagctccgacacagctgtcgcaagatcagctggaggca
gaggagaggctccgggctcaaaagtcccactccaccgcgcttgtgtcatcccgcagagac
ccccctccttacggacagagaaaaggctgggtgccgcgcgcactagaggattttggagat
ggaggagcattcccagaaatccatgtggcccagtttcccctggagatgggcaggaggaag
aaaacctccaatgccctggcagtgcaagtggatgcagagggaaaaatcaaatatgatgcc
attgcaaggcaaggacaggggaaagataaggtgatctttagcaaatatactgacctgctc
cctaaagaagttcttaaagatgactctcaagagctacagaggcctgatgaggaggctgtg
aaggagcttacagagaaaacccgttccgccctggagaagcaggtgtcgcaaaagattgct
gccgccatgcctgtaagagctgcagacaagcaagctcctgcgcaatacatcagatataca
ccatctcagcagggagttgcttttaattcaggagccaagcagagagtgatccgtatggtg
gaaatgcagaaggatcccatggagcctcctcgttttaaaatcaacaagaagattcccagg
ggacctccgtcgccccctgctcctgtcatgcactctcctagcagaaagatgacagtcaag
gaacaacaggaatggaagattcctccatgcatctccaactggaagaacgcaaagggctac
accattcctctagacaaacgtctggctgctgatggaaggggtctgcaaacggttcacatt
aatgagaactttgccaagctggcagaggccctctacatagcagatagaaaggccagagaa
gcggtggaaatgcgagcgcaggtagagaagaagatggctcaaaaggagaaggagaagaag
gaggagaaactgagggagctggctcagatggctcgagaccagagagcagggatcaaaagc
cacggtgataaaggcggcgaagacggggaggccagggagcgtgacatgatccgccacgac
agaaggaaagaccgacagcacgaccgcaacatttccagggcggctcctgataagagatcg
aagctacagagagatcaggacagagacatcagtgagctcattgctctgggcaaacccaac
cctcgtacctccagtgaagctcagtacgaccagcgcctcttcaatcagagcaagggtatg
gacagtggttttgctggtggcgaagacgagacctacaacgtgtacgaccagccgttccgt
agcggcagagacatggctgccaacatctacagacccagcaagaacatagacaaagatgcc
tacgcagatgactttgactctcttatgcagaacaacagatttgctccagacaaggagttc
tctggagccgaccatgggcagagacgggaagggcctgtgcagttcgaggaagatccgttc
ggtctggacaagttcttggagcaagccaaacagcatggcggctccaagaggccgtccacc
agcaaccgctccaaggacgactaccatgacaagaaacgcaggaaggagtga
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