Cyprinodon variegatus (sheepshead minnow): 107097915
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Entry
107097915 CDS
T06110
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04020
Calcium signaling pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107097915
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107097915
04082 Neuroactive ligand signaling
107097915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107097915
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Glutamate (ionotropic)
107097915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
107097915
NCBI-ProteinID:
XP_015250748
Ensembl:
ENSCVAG00000006640
UniProt:
A0A3Q2CIX4
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MELRGVLLLAVLHCCSVALCGCEPRLVNVGAVLSQKRYEQVFKEAVSQANALYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQPNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKKL
ETLLEERETKAEKVLLFTQDTNLTALLLEAKDLEARVIILSASEDEAAAVYKAARQLNMT
GSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHITDAVAVVAQSLQELFEKENI
TEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEFNDDGDRRFATYSILNHQKAGR
VVQVGVFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTRLKIVTIHQEPFVYVKPTKSDGT
CKEEYTVNGVLIKKVICTGPNGTIPGQPTVPQCCYGFCIDLLIKLAMSMNFTYEVHLVAD
GKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTIL
VKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDAL
TLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPE
ERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAV
RDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHE
NGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHK
DARRKQMQLAFAAVNVWRKNLQDRKSGRAEPEPQTSFRSITSTSDLKRRLAPGDPTPYPT
DITGQLNLSDPSVSTVV
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgcggcgtgctgctgctggccgtgctgcactgctgctcagtggcgctgtgc
ggctgcgagccccgcctggtcaacgtgggtgctgtcctgagccagaaacgctatgagcag
gtgttcaaggaggcggtgagtcaggccaacgctctgtacgggaaggacaagttcaagatg
aacgccatctctgtgacgcacaagcccaacgccatccagatggcgctgtccgtctgcgag
gacctcatctccaaccaggtgtatgccatcctggtaagccatcctccacagcccaatgat
cacttgacccccactccggtgtcctacacggccgggttctaccgtatcccagtggtcggc
ctgacgacgcgcatgtccatctactctgacaagagcatccacctgtctttcctgaggaca
gtgcccccatactcccaccaggcacaggtctggttcgacctgatgagagaattcagatgg
aaccacatcatcctgatcgtcagcgacgaccatgagggccgagccgcccagaagaagctt
gagacgctgttggaggagcgtgagaccaaggctgagaaggtgctgctgttcacccaggat
accaacctgactgcattgctgctggaggctaaagacctggaggctcgagtcattatcctg
tcagccagcgaggatgaagctgctgctgtgtacaaagcggcccggcagcttaatatgacc
ggttctggttacgtctggctggtgggagagcgggagatgagcgggaaagctttaagcgaa
gctcctgatggcttgctgggtcttcagctgatcaacgggaagaacgagtcggctcacatc
acggacgccgtggccgtggttgctcagtctctgcaggagctgtttgagaaggagaacatc
acagagcctcctcgaggctgcgtggggaacaccaacatctggagaaccgggccgctcttc
aaacgggtgctgatgtcatcaaagtacccagacggcctcacaggacggattgagtttaac
gacgacggcgaccgccgctttgccacctacagcatcctgaaccaccagaaagcaggtcga
gtcgtccaggttggagtcttcaacggcacgcaggtggtgatgaaccctcagaggaagatc
atctggcctggaggagagacggagaaacctgttggataccagatgtccaccaggctgaag
attgtgaccattcaccaggagccatttgtttacgtgaagccaacgaagagcgatgggacg
tgtaaagaagagtacacggtgaacggagttctgatcaagaaggtgatctgcaccggaccc
aacgggaccatcccaggtcagcccactgtccctcagtgctgctacggtttctgcatcgac
ctgctcatcaagctggccatgagcatgaacttcacctacgaggttcacctggtggctgat
ggaaagtttggcacacaggagcgagtgaacaacagcaacaagaaggagtggaacgggatg
atgggggagctgctgggcggcctggctgacatgatcgtggctcccctcaccatcaacaac
gagcgtgctcagtacatcgaattctccaaacccttcaagtaccaggggctcaccatcctc
gtcaagaaggaaatccctcgcagcactctggactcgttcatgcagccgttccagagcaca
ctgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctttacctattggac
cggttcagcccgtttggaaggttcaaagttaacagtgaagaagaagaagaagacgccctc
accctttcctccgccatgtggttctcgtggggagttctgctgaactctgggatcggagaa
ggagctcccaggagcttctccgcccggatcctggggatggtgtgggccggattcgccatg
atcatcgtagcatcatacaccgccaacctggcagccttccttgtgctggaccggcctgag
gagcgcatcactggcatcaatgaccccaggctgcgtaacccatcagataagttcatctac
gccacagtgaagcagagctcggtggatatctacttcagacggcaggtggagctgagcacc
atgtaccggcacatggagaaacacaactacgagagtgccgctgaggccatccaggccgtc
cgagacaacaagctgcacgccttcatctgggacagcgccgtgctggagttcgaggcgtca
caaaagtgcgacctggtgacgacgggggagcttttcttccgctctggttttgggatcggc
atgaggaaagacagtccttggaagcagaacgtgtctttggccatcctcagctctcatgag
aacggcttcatggaagacctggacaagacctgggtccgataccaggagtgtgactccagg
agcaacgcgcctgccaccctaaccttcgagaacatggcaggtgtgttcatgctggttgct
ggcggcatcgtggcagggatcttcctcatcttcatcgagatcgcctacaagcgtcataaa
gacgcccgcaggaagcagatgcagctggccttcgctgccgtcaatgtgtggaggaagaac
ctgcaggataggaaaagtggtagagcagagcccgagccccaaacctcttttaggtccatc
acttcgacctccgacctcaaacgccgtttggcccccggggaccccacgccgtacccgacg
gacatcaccggccagctcaacctatcggatccatccgtcagcaccgtggtctga
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