Cyprinodon variegatus (sheepshead minnow): 107097933
Help
Entry
107097933 CDS
T06110
Symbol
sbno2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107097933 (sbno2)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107097933 (sbno2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107097933
NCBI-ProteinID:
XP_015250782
Ensembl:
ENSCVAG00000005663
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MSTLTSVLAMDGENYLHPEGPQLNSSLFSVDPSNMESSIFGSSGSWGSFPHQPGYCPMQS
GNQQYHLNSSTTTNIPDMHMSMYTGFPDMDLTSLNLHKNGNGDFPQDLSCIDDLSTSLFS
SPADSLSEYADTTPYISANPQEPLPSIWDINTNTSTATTQAQSHLEQNGTSRFQGLTSLE
DISAIISTPSLGFQAQVTQSSPEEEEEAEEEETEELGHVDTYAEYKPSKSTIGISHPDIV
VETNTLSSVPPPDITYTLSIPESTINSGLLSALQLEAIIYACQQHEVILQNKQRAGFLIG
DGAGVGKGRTVAGIILENYLKGRKKSLWFSISNDLKYDAERDLKDIDAPNIPVHALNKIK
YGDTATSEGVLFATYSALIGESQAGGQHRTRIKQILDWCKQDFDGVIIFDECHKAKNATS
TKMGKAVLDLQNKLPQARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFDDFLHAIEK
RGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRIEEIGLDNDFKEVYNKAAKLWAEALKVF
MQAADDLGLVSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAQKELEAGKCIVIGLQST
GESRTREVLDENDGHLDRFVSAAEGVFQSLVTKHFPSEKQRREKAPGSKRKKGKPRGRQP
KMPKHTVDSGGIINISDDSSSDSEGMDTDSNSSPDSLQDNDDVIFVTHTSSQSARIEEMK
QSLLNKIAELGKELPLNTLDVLIDKFGGPDKVSEMTGRKGRVVRRLDGTVRYESRAEQGS
TIDQINIKEKDRFMTGEKLVAIISEAASSGISLQADKRVKNQKRRVHMTLELPWSADRAI
QQFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKY
NFENKYGTKALDKITKSINGYIDNKVPPPRGYPGGDSMFFKDMKYGMIDVGIISKEPRFG
ISTEKDCSITKFLNRILGLEVHKQNYLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGND
EIYEEKQETFLTAGNPQDGQVVLYKISVDRGMPWEEAYNRSLKLTGPDEGFYLSHKLRGN
SPCVLLAEQGRGKNFNIYKPNIGKQQLPESLNKLQQRYRKVTYLEARESWENQFTFSFKN
CSHANWNGKCKKIEEGQECLAGMRLRQYHMLCGALLRVWKRVSDVVSDITSTSILQIVRL
KTKQHNKQVGIKIPENCVARVREELLQMDTEVKRRRKEKELKELQERKWKLEQQENKHRL
ENLFSQKALPNQSLSQNLNQNALQTTQPVSFSQLPELTQQNSHGLSLFSLQNQNGWCPFP
NSTVSHRPPQFYNPTYFQQSKNPLPPLCQFVPPPSLSSKNPLDEILDLTVSPPSSSPDTT
SANPAAFVDDFNLDALLAAPAPDTSNTMQTAPSQLDLQHILQALQHTQDNAQAAAPLFDL
QPHQQTQQDPQKQEQNPTLLAHLQQQDLDDLFESLSPQMSTQKANPSSSNSSCASSASST
SPHFSNPSSSSSSSLFSSSPSSFPGFILPASNSLPNGHCSSGALDVREALNSMLQAGPDR
KSVIQYRQQE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccttacctcagtgctggccatggacggggagaattacctgcatccagaaggc
cctcagctgaacagcagccttttctcggtggacccctcaaacatggagagttcaatattt
ggctcctctggttcctggggatcgttccctcatcagcctggatactgtcctatgcaatct
ggaaaccagcaataccacttaaatagcagcactaccaccaacattcctgatatgcacatg
agcatgtacacaggattccctgacatggatttaaccagcctcaacctccataaaaatgga
aacggagacttcccccaggacctgtcctgcattgatgacctctcgacctctctgttctcc
tctccggcggactcactgtccgagtacgctgataccacgccctacatcagcgctaacccc
caggaaccactgccctccatctgggacattaacaccaacactagtaccgccaccacacaa
gcacagagccacttagagcagaatggcaccagcaggtttcaaggccttaccagtttggaa
gacatttccgctataatcagcaccccatctttaggattccaggctcaggtaacgcagtcc
tcaccagaggaggaagaggaggctgaagaggaggaaacagaagagctggggcatgtcgac
acatatgctgagtacaaaccctccaaatcaacaataggaatttcacatcctgacattgtt
gtggaaaccaacacactgtccagcgtccctcctcctgacattacctacactttatctatc
cctgagtcaactattaacagtggtctgctgtctgcactgcagctggaggccatcatctac
gcctgccagcaacacgaggtgatcctgcagaacaaacagagagcgggcttcctgattgga
gacggggcgggtgttggaaaggggcgcaccgtggcggggatcattctggagaactacctt
aagggacgaaaaaagtcactgtggttcagcatatccaatgacctgaaatatgacgcagag
agagatctcaaagacatagatgcaccaaatattccggtgcatgccttaaataagataaag
tatggagacacagctacctcagagggagttctttttgcaacttattctgcgctcattgga
gagagccaggcgggggggcagcaccggacacggattaaacagatcctggactggtgcaag
caggactttgatggagtcattatttttgatgaatgccacaaagccaagaatgccacatcc
accaaaatgggcaaggcagtcctggacctgcagaacaagctgccgcaggccagagtggtg
tacgcgagcgccacaggagcctctgagccaaagaacatgatttatatgagccgcctggga
atctggggcgagggcacacccttcagaacctttgatgacttcctgcatgccattgagaag
agaggggtcggggctatggaaattgtggccatggacatgaaagtgagcgggatgtatatt
gccagacagctcagcttttctggcgtttctttccgcatcgaggagatcggcctggataat
gacttcaaagaggtttacaacaaagctgccaagctgtgggccgaggcgttaaaagtcttc
atgcaagcagctgacgacctgggcctggtcagcaggaagtccctgtggggacagttctgg
tcgtcccaccagcgcttcttcaagtacctttgcatcgctgccaaagtgcgctgcctggtg
gagctggctcagaaggagctggaggctggaaagtgtatagttatagggcttcagtctacc
ggagaatcacgcaccagggaggtcttggacgaaaacgacggccatcttgaccgatttgtt
tctgcggcagagggagttttccagtctcttgtaacaaagcactttccttcagagaaacaa
aggagggagaaggcaccggggagtaagaggaaaaaagggaaacctcggggtcgccagcca
aagatgcctaagcacaccgtggacagcggtggcatcataaacatctccgatgacagcagc
agtgactctgaaggaatggacaccgactccaactcctcgccagactctctgcaggacaac
gatgacgtcatctttgttacccacactagctcccagtcagccagaatagaggagatgaag
cagagtctgcttaataagatcgctgaactggggaaagaactacctctcaacactttggac
gtgctcatagacaagtttggaggacctgataaagtttctgagatgactggacggaaaggc
cgcgtcgtcagacgtctagacggcaccgttcgctatgagtcccgtgcagagcaaggctcc
acaattgaccaaattaacatcaaggagaaggaccgcttcatgactggagaaaagttggtg
gctatcatctcagaggcagccagttcagggatctccctgcaagcggacaaacgagtgaaa
aaccagaagcggcgggtccacatgacactggagctgccttggagcgcagacagggccatt
cagcagttcggccgcactcatcggtccaatcaggtcacagcaccagaatacatcttcctc
atctcagagttggccggggagagacgttttgcatctattgtggccaaacgactggagagc
ctgggagctttgacccatggggacagaagagccactgaaagcagggacctgagcaagtac
aactttgagaacaagtatggtaccaaggcgctggataaaatcaccaaatcaatcaatggc
tacatagacaacaaggtgcctcctcccagaggataccctgggggcgactccatgttcttc
aaagatatgaaatatggaatgattgatgtgggtatcatcagtaaggagcctcgctttggt
atcagtacagagaaagactgcagcatcaccaagttcctgaaccgcatcctgggcctggag
gtccacaagcagaactacctcttccagtacttcaccgataactttgactacctgatagaa
aaggacaagaaggagggcaaatatgacatgggaatcctggatctggctcctggtaacgat
gagatttatgaggaaaagcaggaaacgttcctgactgccggaaatcctcaagatggacaa
gttgttctttataagatcagcgtggacagaggaatgccctgggaggaggcgtacaaccgg
tcgctgaagctcactggtcccgatgagggattctacctttcccacaagctgcgaggtaac
agtccgtgtgtgctgctggctgagcagggaagaggtaaaaacttcaacatctacaagccc
aacattggaaagcagcagctccccgagagcctcaacaagctgcagcaacgttacaggaag
gttacttacctggaggccagggagagctgggagaaccagtttaccttttccttcaagaac
tgtagccacgccaactggaatgggaagtgtaagaagattgaagagggccaggagtgcctg
gcagggatgcgcctccgtcagtatcacatgctgtgtggagctttgttgcgggtgtggaag
cgggtctcggacgttgtgtctgacatcaccagcaccagcattctgcagatcgtacgcctc
aaaacgaagcagcataacaagcaagtcggcatcaagatcccagagaactgtgtggctcgc
gttcgtgaggagctgctgcagatggacacagaggtgaaacggagacggaaagagaaggag
ctgaaggagctgcaggagcgcaagtggaagctggagcagcaggaaaataagcatcgtctg
gagaacttgttcagtcagaaagccttacccaatcagtccctcagccagaaccttaaccaa
aacgctctacagaccacccagcctgtgagcttctcccagttaccagaattgactcagcag
aactcccatggcctgtcgctgttctctttgcagaatcaaaacggctggtgtccgttcccc
aacagcacggtcagccacagacctccccagttttacaaccctacttatttccagcagtcc
aagaacccgctgcctccactctgccagttcgtcccgcctcccagtttatcttccaagaac
cctttggatgaaatcttggacctgacagtgagcccgccctcttcgtctccagacaccacc
tcagccaacccggcagcgtttgtggacgatttcaacctggacgctcttctggccgccccc
gctccagacacgtcgaacaccatgcagacggcgccgtctcagctcgatctgcagcacatc
ctccaggctctgcagcacacccaggataacgcacaggccgctgcgcctttattcgacctg
cagccccaccaacagacccaacaggatccacagaagcaggagcagaaccccaccctgctg
gctcatttacagcagcaggacttagacgatctttttgagtctctgtctccacagatgtcc
acgcagaaagccaacccttcgtcttccaactcgtcctgtgcttcctctgcgtcctccacc
tcaccccacttctccaacccatcgtcctcctcgtcctcctccctgttctcaagctcgccc
tccagctttccaggcttcatcctcccagcctcaaactcgctgcccaacggccactgcagc
tcgggcgctctggatgtccgcgaggctctgaacagcatgctgcaagctggcccagaccgc
aagtccgtcattcagtaccgtcagcaagaataa
DBGET
integrated database retrieval system
