Cyprinodon variegatus (sheepshead minnow): 107098020
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Entry
107098020 CDS
T06110
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107098020
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107098020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_2
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
107098020
NCBI-ProteinID:
XP_015250931
Ensembl:
ENSCVAG00000023241
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MFLRAQEWMEGDDFNTEAVMNICDDLMADQRMDISSTMTDFMSPSSTDLISSSISTPGMD
YNRKRKGSTSDYQIDGFSFDDMDPDKDKLGSDHQGRIKNAREAHSQIEKRRRDKMNSFID
ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILR
AADGFLFVVGCDRGKILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDT
APRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK
ADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVAQPSPADI
RVKPTEYVSRHAIDGKFVFVDQRATAILTYLPQELLGTSFYEYFHQDDISHLAECHRQVL
QMREKINTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCHIMEGSDYPQ
SAASPQSMDSVLTSEGGGRRALQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSS
CGSSPLNITSTPPPDTCSPGGKKIQNGGTPELPSSGILPGPDSVGYPYSNQSIMSDNSHL
GIDIMDEPGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaagggctcaagagtggatggaaggagatgattttaatacagaggctgtgatg
aacatctgtgatgacctgatggcagaccagcggatggacatatcgtctacaatgactgac
ttcatgtcccccagttccactgacctcatctccagctccatcagcacacctggcatggat
tacaaccgcaagaggaaaggaagtacctcagactaccaaattgatggcttctcatttgat
gacatggatccggataaggataaactgggcagtgaccaccagggcaggattaagaatgcc
agagaggctcacagtcagattgagaaacgtcggagggacaagatgaacagctttatcgac
gagctggcgtccctcgttcccacctgtaacgcaatgtcccgcaaactggataagctaacg
gtgctgcgtatggcagtccagcacatgaagacactcagaggtgcagctaacccatacact
gaggccaactacaagccttcctttctctcagacgatgaactgaagcatctgatactaagg
gctgctgacggtttcctctttgtggtcggctgcgatcgcggcaaaatcctttttgtttcc
gaatctgtatacaagatactgaactacagccagaatgacctaataggtcagagtttgttc
gactaccttcaccccaaggacatcgccaaagtcaaagaacagctgtcgtcttcagataca
gccccaagagagagacttattgacgctaaaaccggtcttcccgtgaagacggacatcact
cctggtccctctcggctctgttctggagccaggcggtcgtttttctgcaggatgaagtgc
aacaggccttctgtcaaagtagaagataaagactttccttccacctgctccaaaaagaaa
gctgaccggaagagcttctgcaccatccacagcacagggtatctaaagagctggcccccc
accaagatggggctggacgaagacaacgagccggacaacgagggctgcaacctgagctgc
ctggtggccatcggccgcctacatccccacatcgtcgcccagcccagcccggcagacatc
agggtgaagcccacagagtacgtctcccgacacgccatcgacggcaagtttgtcttcgtc
gaccagagagcaacagctatcctcacctaccttccccaagagctgcttggaacctccttc
tatgagtatttccatcaggatgacatcagccacctagcagaatgtcacagacaagtcctg
cagatgagagaaaagatcaacaccaactgttacaaattcaaaatcaaagatggctccttt
ataacgttgaggagcagatggttcagctttatgaacccttggaccaaggaggtggagtac
atcgtctctacgaacaccgtcgtatcgtgtcacataatggaaggatcagattaccctcag
tctgctgcttccccacagagtatggacagcgttctgacctcagagggcggcgggaggcga
gctctgcaaactgtccctggcatccctggtggcactagagcgggagcggggaagatcggc
cgcatgatagcggaggaagtgatggagattcagaggattcgaggctcctccccctccagc
tgtggttccagccctctgaacataaccagcacccctccaccggacacctgctcaccaggg
ggcaagaagattcagaacggtgggacaccggagctgccgagctcggggatccttcctgga
cccgattctgtgggctacccgtactccaaccaatccatcatgagcgataactcccacctg
ggcatagacattatggacgagccgggttccagcagccccagcaacgatgaagccgccatg
gcggtcatcatgtctctgttagaggccgacgccgggctgggcggccccgtcgacttcagt
gacctgccctggcctttgtga
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