Cyprinodon variegatus (sheepshead minnow): 107098070
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Entry
107098070 CDS
T06110
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107098070 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107098070 (apex1)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107098070 (apex1)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107098070 (apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
107098070
NCBI-ProteinID:
XP_015250996
Ensembl:
ENSCVAG00000022075
UniProt:
A0A3Q2EI26
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MKRGKNTEEAAAEGENDTGSASTKKAKKTKEPEAPILYDDPPDKTTSKDGRSANMKITSW
NVDGLRAWVKKNGLDWVREENPDVLCLQETKCSEKALPAEITSMPEYPHKYWAVSDDKEG
YSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPNFYLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLSELDIQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGFSQLLEAG
FVDSFRELYPEQANAYTFWTYMMNARSKNVGWRLDYFLLSSSLLPGLCDSKIRNKVMGSD
HCPITLLVAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggaaagaacacagaggaggcggcagcagagggagagaatgataccggatca
gcttctacaaagaaggccaagaaaacaaaggagcccgaggctccaattttgtacgatgat
ccccctgataaaacgacgagcaaagacggacgaagcgccaacatgaagatcacctcctgg
aacgtggatggactcagggcgtgggtgaaaaagaatggcctggattgggtgcgtgaggag
aacccagacgtcctgtgcctccaggaaaccaagtgctcagagaaagcccttcctgctgag
atcacgtccatgccagagtacccccacaagtactgggctgtgtccgatgacaaggaggga
tacagtggcgtagccatgctgtgcaagactgaacctctgaaagtgacctatggaattggc
aaagaggagcatgacaaggaggggcgtgtcattactgccgagttcccaaacttctatttg
gtgacggcctacgtccccaacgccagcagaggccttgtccgcttagattaccgcaaaacc
tgggatgtcgacttcagagcttacctcagcgagctggacatccagaagcccctggttctg
tgcggagatctcaacgtggcacaccaggagatcgacctgaagaacccgaagggcaacaag
aagaacgcgggattcaccccggaggagcgcgaaggcttcagccagctgctggaggcgggc
ttcgtggacagcttccgtgagctgtaccccgagcaggccaatgcctacaccttctggacc
tacatgatgaacgcacgatctaagaacgtcggctggaggctggactatttcctgctgtcg
tcttctctgctccccggcttgtgcgacagcaagattcgcaacaaggtgatgggcagcgac
cactgcccaatcacgctcctcgtagctgtgtga
DBGET
integrated database retrieval system
