Cyprinodon variegatus (sheepshead minnow): 107098145
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Entry
107098145 CDS
T06110
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107098145
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107098145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107098145
NCBI-ProteinID:
XP_015251116
Ensembl:
ENSCVAG00000019147
UniProt:
A0A3Q2EDG0
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MYSLMEPSGQPQSHQAAGMSPITGTNGGALPKAACAPGGDPMDKVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYKPRRKT
KPLLKKDAQVGKYPLSAGNLLSAAAQSQGGSPRMEGYGWAPAGGYAGMQSEALSYTQQLH
RYDLSALQYPPAMTAAQSYMSGANSYSPMSYSSSPQQLSPVNMPMVKAEPVSHSPSTATP
NHHRGPLQGDLRDMISMYIPGPGGDSSDPASAQRGYASVQQHYLSGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcctgatggagcccagcgggcagccgcagagccaccaggccgccgggatgtca
cccatcaccgggaccaacggcggcgcgctgcccaaagcggcgtgcgcgcccggaggcgac
cccatggataaggtcaagcggcccatgaacgccttcatggtgtggtccaggggccagagg
cggaaaatggcgcaagaaaaccccaaaatgcacaactccgagatcagcaagcggctgggg
gcggagtggaaacttctgacggacgcggagaagcggcccttcatcgatgaagccaagcgg
ctgcgggccgtccacatgaaggagtacccggactacaagtacaagccgcgccgcaaaacc
aagccgctgctgaagaaggacgcgcaggtggggaagtacccgctgtcagccggcaacctg
ctgagcgcggcggcgcagagccagggcggcagtccgaggatggagggctacggctgggct
ccggccggaggctacgccggcatgcagagcgaggcgctcagctacacgcagcagctgcac
cggtacgacctgtccgcgctgcagtacccgcccgcgatgacggcggcgcagagctacatg
agcggagccaactcctacagccccatgtcgtacagcagcagcccgcagcagctgagcccc
gtcaacatgcccatggtgaaggcggaaccggtgtcccattcgccctccacggcgacgccg
aaccaccaccgagggcctctgcagggggacctcagggacatgattagcatgtacatacca
ggacccggaggggattcctcggatcccgccagtgcacagaggggctacgccagcgtccag
cagcactacctcagtggaaccgtcccgctgacgcacatctag
DBGET
integrated database retrieval system
