Cyprinodon variegatus (sheepshead minnow): 107098235
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Entry
107098235 CDS
T06110
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107098235
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107098235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
107098235
NCBI-ProteinID:
XP_015251251
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MDNLTPEQWREIMNKKMRFPPELLNAIQEGRIELLCGLLRTGDGIIRQLDESEDRQWREA
LNLSIRLGNEDAMDALLQGVKFDFRQIHEALLVAVDTNQPKVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSIDDSQFAPGVTPLTLACQKDLYEIVTMLTQKGHVIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSNDAMLSAFSLSRELRKLSQKEPEFKPQYL
SLEQLCQEFAVELLGMCRNQSEVTTILNSCGDESQDALDEQAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTIWKLLVSVGIFFTMPFLCLVYWVAPKSKAG
KILKIPVIKFLLHSASYLWFLITLLGESITMEMYRDKFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVLIMLKGHFLCHDQSNSDECIYF
TQTVRDNWHQEDPQLISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFNFLFWTMFGVANQDYVDMPQFVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAIFYILRGIFKRICCCCNYNSEQKYPPIASVSSDKGSEDSLPYRQQVIRAL
VQRYIESARREFEETKRKDIGNRITELNKAVSRMHIEMKGIQQLLLTDGHAPNDALTKDG
SSVLGKYIIGAKNNFRGFNSRQDDKNTSLKVTVHHKEEGADERKADSEARQDTDALLNQV
NESEEEESSKVTDCEVVKMEEGRAKAEVEGEKETEKREHVVRLNKEDDKVKEEVTGGTSF
ISPEEKVKVESTQGAEIKREGEMNSQVTEKQEEMRPESKETSCETTAAKKMIDKFNNIEL
IEKSGEAGWMKGIKCGSKVEGRSCTTKGGENNGNKKAIQSPTGSSGSNDTGFGSQEGEGS
IDAPSVKT
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggataacctcacgccggagcaatggcgcgagattatgaacaaaaagatgcgcttccct
ccggagctcctcaacgccattcaggaggggaggatagagcttctatgtgggctcctgagg
actggggacggcatcattcgccagttggatgaatcagaggaccgccaatggagggaagct
ctcaacctctccatccgcctgggcaatgaagatgccatggatgccctcctgcagggggtc
aagtttgacttccggcagattcacgaggctctgctggtggctgtggacacaaatcagccc
aaggtagtgaaacgcctgttggatcgcctggaccaggagaaaggcaacaagatggacgta
cgatccttctctcaagccatcttcgaccggtccattgacgactcacagtttgcacctggt
gtgactcctctgacacttgcttgccagaaagatctctacgagatagtcactatgctcact
cagaaaggccacgtcatcccatggccccataagatctcctgcgcctgtctggagtgtcgc
aacggccgacaatacgacctgttgaagttctccttgtctcgcatcaacacctaccgtggg
atcgccagccgtgcctacctgtccgtcacctccaatgatgccatgctcagcgccttcagt
ctcagcagagagctccgcaagctgtcccaaaaagagccagaatttaagcctcagtacctg
agcctggagcagctctgtcaggagtttgcagtggagttgttgggaatgtgccgcaaccag
agtgaggtcaccacaatcctaaacagctgcggagatgagagccaggacgctttggatgag
caggccttcgaggagggaatacccaacctgtcacgtctgaggctcgctgtcaactacaac
cagaagcagtttgttgcccatccgatctgtcagcaggtcctttcctccatctggtgtgga
aacctggcagggtggagaggtagcaggaccatctggaagctcttggtctctgtcgggatc
ttttttactatgcccttcctttgcctcgtctattgggttgccccaaagtcaaaggcagga
aaaattcttaaaatcccagtgatcaagtttctccttcattctgcatcctacctgtggttt
ctcatcacattacttggagaatccataactatggagatgtatcgagacaaatttgcatcc
cgtcagcagaacatcctgcacagctcattccacatggtgtgggtggttggattcttctgg
tatgagtgtaaggaagtctggattgagggcttgcggagctacttcctggactggtggaac
tgcttggacgtgatggtgctgagcatgtatttggcatccttcgcactgcgtgtgctcatc
atgctcaaaggtcacttcctctgccatgatcagagcaacagcgacgaatgcatctacttc
actcagactgtccgtgacaactggcaccaggaggacccacagctcatctctgaggtgctg
tttgcagtaaccagcatgctcagcttcacccggctggcctacatcctgccagcccacgag
tccctgggaacgctgcagatctccatagggaagatgattgacgacatgatgagattcatg
tttatactgatgatcattggaaccgccttcctctgtggcataaacaatgtctatgttcct
tatgtcatttctccacatcttggcaggtttaatgagacctttaacttcttattttggacc
atgtttggcgtggccaaccaggactatgtggacatgccccagtttgttttagcagagttt
gtaggaaggatcctgtacggcatctttaccctcgtcatcgttattgtcctcctcaacatg
ctcattgccatgattactaattccttccagaagattgaggatgatgcagacgtagagtgg
aaattcgctcgttctaagctgtacctgagctacttcagagagggcctcaccatgcctgtg
cctttcaacatcatcccttcaccaaaagctatcttttacatcctgagggggatttttaaa
cgcatctgctgttgctgcaactataactcagagcaaaaataccctccgatagcctcggtg
tccagtgataagggatcggaggacagcctgccttaccgacagcaggtcatcagagctctg
gtccagcgctacatcgagtcggctcgcagggagtttgaggagaccaagaggaaagacatc
ggtaaccggatcacagagctgaacaaagccgtctccaggatgcacattgaaatgaaaggg
atccagcagcttctactgactgatggacacgctccaaacgatgcgctgaccaaggatggt
tcctctgtgctggggaaatacatcattggtgccaagaataacttcagaggctttaacagc
aggcaagatgacaaaaacacatcgcttaaagtgacagttcatcacaaagaggaaggggct
gatgaaaggaaggccgattcagaggcgcggcaggacacagatgctctattgaatcaggtg
aatgaaagtgaagaagaagaatcgagtaaggtgacagactgcgaagtggtgaaaatggaa
gagggacgagcaaaagcagaagtagagggtgagaaggaaactgagaaaagagagcatgta
gtaaggttaaacaaggaagatgataaagttaaagaggaggtcacaggagggacaagtttt
atcagcccagaggaaaaggtgaaagttgagagcacacagggtgcagagataaaaagggaa
ggagaaatgaactcccaggtgacagaaaaacaagaagaaatgaggccagagagcaaagaa
acaagctgtgaaacaacagctgcaaagaaaatgattgacaagttcaataacatcgagctg
atagaaaaatcaggagaggctggatggatgaagggaataaaatgtgggagtaaagtagag
gggagatcttgcacaaccaaggggggcgagaacaacggaaacaagaaagcgattcagtct
ccaacgggcagcagcggctcaaacgacactggctttggttcacaggagggggaaggatcc
atagacgccccatctgtaaagacctga
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integrated database retrieval system
