KEGG   Cyprinodon variegatus (sheepshead minnow): 107098255
Entry
107098255         CDS       T06110                                 
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
  KO
K16175  protein scribble
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    107098255 (scrib)
SSDB
Motif
Pfam: PDZ PDZ_6 LRR_8 LRR_14 LRR_4 PDZ_2 LRR_1 LRR_13 LRR_LRWD1 LRR_9
Other DBs
NCBI-GeneID: 107098255
NCBI-ProteinID: XP_015251301
LinkDB
Position
Unknown
AA seq 1389 aa
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEIFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMHLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRL
PDGFTELRTLAHLSLNDVTLQTLPNDIGNLGNLVTLELRENRLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENHLEELPSELS
GLLALTDLLLTQNLLEVIPNSIGSLKQLSILKVDQNRLTQLTDSLGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGSVPKELGGCTSLNVLSLRDNRLSKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTDDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQEETKAEEEDDEAAAELRGLQRRATPHPSEL
KVMKKGIEDRRNEVFTSRPDGEDESLDPQEKRLSDVSNQSHDSQVSNSTLSATSHEDKHN
VVANSQREDMVDGQSPQEEEDLDEMEVEYIEPTVHFAEEPIIRGGDEDDDEEDRENGERS
DEEDERPAFPQEKQRLIRKDTPHYKKHFKINKLPKPEAVAALLQGFSPDGLNSPTQPAED
EQEEEQEGAELAVGTPQHHHRIEELDDIRHQGSSSQVKGVSFDQVNNLLIEPARIEEEEH
SLTIVRQSGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGVKVGDKLLEVNGVD
LHEAEHHTAVEALRSSGATVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGLAFN
LEGSPSGTRQTFSTCLIRNDKGLGFSIAGGKGSTPYRTGDTGIYISRIAEGGAAHRDSTL
RVGDRVLSINGVDMTEARHDQAVTLLTGTSPTITLLVERDPSAPGGSPGQNRARAHSPPP
PEPSASPDQDEEGLQGNVGKIDDEYPIEEVTLVKSGGPLGLSIVGGSDHASHPFGINEPG
VFISKVIPHGLACKSGLRVGDRILEVNSIDLRHATHQEAVRALLANKQEIRMLVRRDPSP
PGMQEVLIQKQSGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSTGAAARDGRLQVGM
RILEVNNHSLLGMTHTEAVRVLRAVGDSLVMLVCDGFDPRKVTAVEASPGIIANPFATGI
VRKNSMESISSIDRDLSPEEMEIIQKESEMVRETSQWEREEMEKVERMRLEREEATRLLE
EETENIGGGPLKLDYKTLAALPTTSLQKVNKTPSDYTRTDSPVREAPYSPTIQPPSHHSS
NSSLCAGRETRFANIHYTATPTAKDSTSSSVSVSRKEQRITFETKFQLEKTFMENDPGLN
SSRISCVGA
NT seq 4170 nt   +upstreamnt  +downstreamnt
atgctgaagtgtatccccctgtggcgctgcaatcgccacgtcgagtccgtggacaagcgc
cactgcaacctgcagactgtccccgatgagatctttcgctacagccggagcctggaggaa
cttctcctggatgccaaccaactcaaagagctacccaagcctttcttcagactactgaac
ttacggaagcttggcttgagtgacaatgagatccagagactccctcctgaagtggctaac
ttcatgcacctggtggagctggacatctccagaaatgatatccctgagatccctgagagc
atcaagttctgtaagtcattggagattgcagatttcagtggaaaccctctttccagattg
ccagatggcttcactgagctgcgaacactggcccatctttcactcaacgatgtgacatta
cagacattacccaatgacattggaaatctgggcaatttggtgaccttagagctcagggag
aaccggttgaagtctctacctacgtcactctctttcctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagttttgccggacacgctcggcgctctccccaacctcaga
gagctgtggttggaccgtaatcagttgtcttcattaccacctgagctaggtaaccttcgg
cgactggtgtgtctggatgtctctgagaaccacctggaggagcttccatcagagctaagc
ggcctcctggctctcaccgacctgctgctcacgcagaacctgctcgaagtcattccaaac
agtataggttccttaaagcagttgtccatcctgaaagtggaccagaaccgattgactcag
ctgacggactctttaggagagtgtgaaaacctcacagagcttgttctgacagaaaatctt
ttacagacgcttcctcgctcgctgggcaagctgaagaagctgactaacctgaatgtagac
cggaatcggcttggcagcgttcccaaagaacttggcggctgcaccagcctcaacgtcctc
tcgttgagagataaccgcctgagcaaactgcccgctgagctggcagacgccaccgagctg
catgtgctagatgtagctggaaacagactacaaaacttgcctttcgccctaacaaacctc
aacctaaaggccatgtggctcgcagagaaccagtcccagcccatgctcaagttccagacc
gatgatgatgagcgaacgggagagaaagtgttgacctgctatttgctcccccaacagccg
tcaccaagccttgagaaccttctgcagaacagcgtggacgacagctggacggacagcaat
ctgaacagagtgtccgtcattcagttccaggaggagaccaaagctgaagaggaggatgat
gaagctgcagcagagcttagaggtctccagcgcagagccacccctcatcccagtgagctg
aaggtgatgaagaagggcattgaggacaggaggaatgaggtcttcacatccagacccgat
ggagaagatgagtcccttgacccacaggagaaacgactgagtgatgtttcaaatcagagc
cacgactcccaggtgtccaacagcacactctctgccacgtcacacgaggacaaacacaat
gtagttgctaactcacagagggaggacatggtggatggccagtctcctcaggaggaggaa
gacctggatgagatggaggtggagtacattgagccaaccgtgcactttgcagaagaacca
attatccgcggtggagatgaggatgatgatgaagaagacagagagaatggggagaggagc
gacgaagaggacgagaggccagcttttccccaagagaagcagcggctgatcagaaaggac
acaccacactacaagaagcacttcaaaatcaacaagctgcccaaacccgaggccgtggcc
gcactgctgcagggcttcagtcctgatgggctcaactccccgacacagcctgctgaggat
gagcaagaagaggagcaggagggggctgagctggctgtaggcacccctcagcaccatcac
agaatagaagagctggacgacatccggcatcagggcagctccagccaagtcaagggggtg
tcatttgatcaagtcaataatctgctgattgaacctgctcgaattgaggaggaagagcac
tctctgaccattgtgcgacaatctggtggacttggtatcagcatagcaggaggaaaagga
tctacaccttacaagggagatgatgagggaatcttcatctccagagtatctgaggacggt
cctgctgcaagagcaggagtgaaagtgggagataagcttctagaggtgaacggcgtagac
cttcatgaagcagagcatcacacagcagttgaagctctccgtagctccggtgcgacggtt
tccatgacagtactgcgggagcgcatggtggagcccgagaacgccatcaccaccacaccg
ctgaggccagaggacgactacttcccgcgggagagaaggagcagcggcctcgccttcaac
ttggagggcagtcccagcggcacccggcagactttctccacctgcctgatccggaatgac
aagggccttggattcagtatcgcaggaggcaaaggctcaacaccgtatcgtacaggggac
acgggcatctacatttctagaatcgccgagggaggagccgcacacagagacagcacgctg
cgtgtcggagacagggttctctccatcaatggtgtagacatgacagaagccaggcatgac
caggcagtaacgctccttaccggcacctcccccaccatcacactgctggtagagagagac
ccaagcgcaccgggaggctctccaggtcaaaaccgggcacgagcccactcccctccaccc
ccggagccctcagcctctcctgaccaagatgaggaaggccttcaagggaacgtgggaaag
attgacgacgagtatccaattgaggaggtgaccttagtgaagtcaggcggccctcttgga
ctgagcatcgttggaggcagtgaccatgccagtcacccctttggcatcaatgaacctggg
gtcttcatctctaaggtgattcctcacggtttggcttgtaaaagtggccttcgagtcggc
gaccgcatattagaggttaactccatcgacctgcgacatgccacgcaccaggaagcggtg
cgggccctcctggccaacaaacaggagatccgcatgttggttcggagggatccttcccca
cctgggatgcaggaggttttgatccagaaacagtcaggggagaagcttggcatcagcatt
cgtggaggagcaaaaggtcatgctggaaaccccttcgaccccacagatgagggcatcttt
atctcaaaagtgagttcgactggagcagcggccagggatggaaggctgcaggtcggcatg
cgtatcctggaggtgaacaaccacagcttgctgggaatgacccacacagaggcagtgaga
gtccttcgtgctgtcggggactccctggtcatgctggtgtgtgatggattcgacccgcgt
aaggtcactgctgtcgaggcgtctccagggatcattgccaacccgtttgcaacaggcatc
gtgcgcaagaacagtatggagagcatctcttctatagaccgggatctgagcccagaggag
atggaaatcatacagaaggagtctgagatggtcagagagacctcgcagtgggagcgagaa
gagatggagaaagtggagcgtatgcgtttggagcgtgaggaggcaactcgcctgctagaa
gaggagacggagaacattggcggtggacctttaaaacttgactacaaaaccctggctgca
ctccccaccaccagcctgcaaaaagtcaacaaaacaccttctgattacaccagaacagac
agtcctgtcagggaagcaccatattctcccaccatccagccgcccagccaccactcctcc
aacagctccctgtgtgcaggcagggagacccgctttgcaaacattcattacactgccact
cccactgctaaggacagcacctcatcatcagtgagtgtcagtaggaaagaacagcggatt
acctttgaaactaaatttcaattagaaaaaacatttatggaaaacgaccctggtttgaat
agctcaagaatctcctgtgtaggtgcttag

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