Cyprinodon variegatus (sheepshead minnow): 107098255
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Entry
107098255 CDS
T06110
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107098255 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
107098255
NCBI-ProteinID:
XP_015251301
LinkDB
All DBs
Position
Unknown
AA seq
1389 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEIFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMHLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRL
PDGFTELRTLAHLSLNDVTLQTLPNDIGNLGNLVTLELRENRLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENHLEELPSELS
GLLALTDLLLTQNLLEVIPNSIGSLKQLSILKVDQNRLTQLTDSLGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGSVPKELGGCTSLNVLSLRDNRLSKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTDDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQEETKAEEEDDEAAAELRGLQRRATPHPSEL
KVMKKGIEDRRNEVFTSRPDGEDESLDPQEKRLSDVSNQSHDSQVSNSTLSATSHEDKHN
VVANSQREDMVDGQSPQEEEDLDEMEVEYIEPTVHFAEEPIIRGGDEDDDEEDRENGERS
DEEDERPAFPQEKQRLIRKDTPHYKKHFKINKLPKPEAVAALLQGFSPDGLNSPTQPAED
EQEEEQEGAELAVGTPQHHHRIEELDDIRHQGSSSQVKGVSFDQVNNLLIEPARIEEEEH
SLTIVRQSGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGVKVGDKLLEVNGVD
LHEAEHHTAVEALRSSGATVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGLAFN
LEGSPSGTRQTFSTCLIRNDKGLGFSIAGGKGSTPYRTGDTGIYISRIAEGGAAHRDSTL
RVGDRVLSINGVDMTEARHDQAVTLLTGTSPTITLLVERDPSAPGGSPGQNRARAHSPPP
PEPSASPDQDEEGLQGNVGKIDDEYPIEEVTLVKSGGPLGLSIVGGSDHASHPFGINEPG
VFISKVIPHGLACKSGLRVGDRILEVNSIDLRHATHQEAVRALLANKQEIRMLVRRDPSP
PGMQEVLIQKQSGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSTGAAARDGRLQVGM
RILEVNNHSLLGMTHTEAVRVLRAVGDSLVMLVCDGFDPRKVTAVEASPGIIANPFATGI
VRKNSMESISSIDRDLSPEEMEIIQKESEMVRETSQWEREEMEKVERMRLEREEATRLLE
EETENIGGGPLKLDYKTLAALPTTSLQKVNKTPSDYTRTDSPVREAPYSPTIQPPSHHSS
NSSLCAGRETRFANIHYTATPTAKDSTSSSVSVSRKEQRITFETKFQLEKTFMENDPGLN
SSRISCVGA
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaatcgccacgtcgagtccgtggacaagcgc
cactgcaacctgcagactgtccccgatgagatctttcgctacagccggagcctggaggaa
cttctcctggatgccaaccaactcaaagagctacccaagcctttcttcagactactgaac
ttacggaagcttggcttgagtgacaatgagatccagagactccctcctgaagtggctaac
ttcatgcacctggtggagctggacatctccagaaatgatatccctgagatccctgagagc
atcaagttctgtaagtcattggagattgcagatttcagtggaaaccctctttccagattg
ccagatggcttcactgagctgcgaacactggcccatctttcactcaacgatgtgacatta
cagacattacccaatgacattggaaatctgggcaatttggtgaccttagagctcagggag
aaccggttgaagtctctacctacgtcactctctttcctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagttttgccggacacgctcggcgctctccccaacctcaga
gagctgtggttggaccgtaatcagttgtcttcattaccacctgagctaggtaaccttcgg
cgactggtgtgtctggatgtctctgagaaccacctggaggagcttccatcagagctaagc
ggcctcctggctctcaccgacctgctgctcacgcagaacctgctcgaagtcattccaaac
agtataggttccttaaagcagttgtccatcctgaaagtggaccagaaccgattgactcag
ctgacggactctttaggagagtgtgaaaacctcacagagcttgttctgacagaaaatctt
ttacagacgcttcctcgctcgctgggcaagctgaagaagctgactaacctgaatgtagac
cggaatcggcttggcagcgttcccaaagaacttggcggctgcaccagcctcaacgtcctc
tcgttgagagataaccgcctgagcaaactgcccgctgagctggcagacgccaccgagctg
catgtgctagatgtagctggaaacagactacaaaacttgcctttcgccctaacaaacctc
aacctaaaggccatgtggctcgcagagaaccagtcccagcccatgctcaagttccagacc
gatgatgatgagcgaacgggagagaaagtgttgacctgctatttgctcccccaacagccg
tcaccaagccttgagaaccttctgcagaacagcgtggacgacagctggacggacagcaat
ctgaacagagtgtccgtcattcagttccaggaggagaccaaagctgaagaggaggatgat
gaagctgcagcagagcttagaggtctccagcgcagagccacccctcatcccagtgagctg
aaggtgatgaagaagggcattgaggacaggaggaatgaggtcttcacatccagacccgat
ggagaagatgagtcccttgacccacaggagaaacgactgagtgatgtttcaaatcagagc
cacgactcccaggtgtccaacagcacactctctgccacgtcacacgaggacaaacacaat
gtagttgctaactcacagagggaggacatggtggatggccagtctcctcaggaggaggaa
gacctggatgagatggaggtggagtacattgagccaaccgtgcactttgcagaagaacca
attatccgcggtggagatgaggatgatgatgaagaagacagagagaatggggagaggagc
gacgaagaggacgagaggccagcttttccccaagagaagcagcggctgatcagaaaggac
acaccacactacaagaagcacttcaaaatcaacaagctgcccaaacccgaggccgtggcc
gcactgctgcagggcttcagtcctgatgggctcaactccccgacacagcctgctgaggat
gagcaagaagaggagcaggagggggctgagctggctgtaggcacccctcagcaccatcac
agaatagaagagctggacgacatccggcatcagggcagctccagccaagtcaagggggtg
tcatttgatcaagtcaataatctgctgattgaacctgctcgaattgaggaggaagagcac
tctctgaccattgtgcgacaatctggtggacttggtatcagcatagcaggaggaaaagga
tctacaccttacaagggagatgatgagggaatcttcatctccagagtatctgaggacggt
cctgctgcaagagcaggagtgaaagtgggagataagcttctagaggtgaacggcgtagac
cttcatgaagcagagcatcacacagcagttgaagctctccgtagctccggtgcgacggtt
tccatgacagtactgcgggagcgcatggtggagcccgagaacgccatcaccaccacaccg
ctgaggccagaggacgactacttcccgcgggagagaaggagcagcggcctcgccttcaac
ttggagggcagtcccagcggcacccggcagactttctccacctgcctgatccggaatgac
aagggccttggattcagtatcgcaggaggcaaaggctcaacaccgtatcgtacaggggac
acgggcatctacatttctagaatcgccgagggaggagccgcacacagagacagcacgctg
cgtgtcggagacagggttctctccatcaatggtgtagacatgacagaagccaggcatgac
caggcagtaacgctccttaccggcacctcccccaccatcacactgctggtagagagagac
ccaagcgcaccgggaggctctccaggtcaaaaccgggcacgagcccactcccctccaccc
ccggagccctcagcctctcctgaccaagatgaggaaggccttcaagggaacgtgggaaag
attgacgacgagtatccaattgaggaggtgaccttagtgaagtcaggcggccctcttgga
ctgagcatcgttggaggcagtgaccatgccagtcacccctttggcatcaatgaacctggg
gtcttcatctctaaggtgattcctcacggtttggcttgtaaaagtggccttcgagtcggc
gaccgcatattagaggttaactccatcgacctgcgacatgccacgcaccaggaagcggtg
cgggccctcctggccaacaaacaggagatccgcatgttggttcggagggatccttcccca
cctgggatgcaggaggttttgatccagaaacagtcaggggagaagcttggcatcagcatt
cgtggaggagcaaaaggtcatgctggaaaccccttcgaccccacagatgagggcatcttt
atctcaaaagtgagttcgactggagcagcggccagggatggaaggctgcaggtcggcatg
cgtatcctggaggtgaacaaccacagcttgctgggaatgacccacacagaggcagtgaga
gtccttcgtgctgtcggggactccctggtcatgctggtgtgtgatggattcgacccgcgt
aaggtcactgctgtcgaggcgtctccagggatcattgccaacccgtttgcaacaggcatc
gtgcgcaagaacagtatggagagcatctcttctatagaccgggatctgagcccagaggag
atggaaatcatacagaaggagtctgagatggtcagagagacctcgcagtgggagcgagaa
gagatggagaaagtggagcgtatgcgtttggagcgtgaggaggcaactcgcctgctagaa
gaggagacggagaacattggcggtggacctttaaaacttgactacaaaaccctggctgca
ctccccaccaccagcctgcaaaaagtcaacaaaacaccttctgattacaccagaacagac
agtcctgtcagggaagcaccatattctcccaccatccagccgcccagccaccactcctcc
aacagctccctgtgtgcaggcagggagacccgctttgcaaacattcattacactgccact
cccactgctaaggacagcacctcatcatcagtgagtgtcagtaggaaagaacagcggatt
acctttgaaactaaatttcaattagaaaaaacatttatggaaaacgaccctggtttgaat
agctcaagaatctcctgtgtaggtgcttag
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integrated database retrieval system