Cyprinodon variegatus (sheepshead minnow): 107098289
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Entry
107098289 CDS
T06110
Name
(RefSeq) myomesin-1-like isoform X1
KO
K24495
myomesin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107098289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107098289
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
107098289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
C2-set_3
Ig_CD22
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
107098289
NCBI-ProteinID:
XP_015251363
LinkDB
All DBs
Position
Unknown
AA seq
1508 aa
AA seq
DB search
MSRSVQVTQKQQQQLQLRQQLEEKQHYESSYYLSSRSSVSKQAFSTHKTSSHRLKSSVKT
EKRQEAVKLSPLPKRAKRTYLAMDKDKEVIGYVIPVFRANHDTVRGLMEAQEEDVTEEGI
NYVAMRNLFVREAREAMDVKVEKKTRTKHVRESAERLEFGRTMEEWTEFRKKMHPDRLTH
PPEFIVKPRGQTVWEGRTVRLHCTVAGWPKPKIAWYKNNVLIDAKAHPEKYTAESSYNMH
SLEIKNCDFLDTAQYYVSALNVKGEASTGATVVIKRFQDGTEEGPFDPKPHGFCLEHGVT
FKTSIIDKFEVAFGHEGETLSLGCTVIIYPTVKKYQPDVVWYRNSVPLKPSKWVHTHWSG
ERATLTLTHLNKEDEGMYTLRVNTKSGFDTYSAYVFVRDADVEVEGAPVAPLDVRCHDAN
KDYVVVTWKQPAVEGSSPILGYYIDRCEVGTHHWAQCNDDPVKYARFPVTGLVEGRTYVF
RVRAFNKAGFSRPSRVSDPVVAMDPSDRARLRAGPLAPWTGVIKFTEEEPTVGVIPGEPT
DVVVTEATKSYVVLAWKPPQQRGHEGVMYYIEKCIQGTDTWQRVNTGMPVKSPRFAIFDL
AEGKSYNFRVRCCNSAGVGEPSVPTGEIIVGDKLDLPSAPCSPVAIRNTDTSVVVTWGAS
KDVKHLVGYYIESSVVGTDVWMPCNNKPVKQTRFVCHGLTTGSNYVFRVKAVNAAGYSQS
SSISDAVVVVAAVAVPAKPTNVTLLEAVKDYMVLGWTAPSNNGGADIRGYFVDYRTVKGD
IYGKWHEMNEKALTTTSYKAENLKENVFYQFQVRAMNMAGVSKPSLPSASLECKEWTITI
PGRPVGLHVLEVRDTSVVVLWEPPAFNGRSPVNGYYLDIREASAGEEGWKAVHEKTNKEK
YMKVTGLIAGTSYIFRVRAQNIVGVGRPSAELGPVLAQTRPGTKEIYVDVDDDGVISMIF
ECSEMKEGSHFVWSKNYQEITDTSRLTIVTEGSKSRAIFNSLSLEDLGTFSCMVTNTDGI
SSSYTLTEEALLRLLDLSHEHKFPVIPFKNEMAMELLEKGRVRFWAEMEKFTSACQVEYV
FNDVIIEQGKKYTMNFDKSSGLIELFMDSLEVTDEGTFTFNMVDGKAKGTTSLVLIGDEF
RELQRKSEFERAEWVRKQGPHFVEYLGFTVTPECNVLLKCKIGNIKPETEIIWSKDCIEI
AEDDEDAEKIEKKDSELTFNIGKWVNKQEQKKEGKKPSAKDVPLPPRPKISKQDAGIYEV
FLRDERGKDKSSFNLTEAGYQTVMNELFRVIANSSNDIQILSTEHGIVLHSNVVYYDENL
RVGWLHKDAKIAASERVKSGVTGEQLWLKINEPTEKDKGKYTMDIFDGKDGVKRVLDLSG
KVWEEAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPTPEVSWVK
NDKELVSDDRYKLKFEHGKFASITIAAVTTADSGKYALVVKNKYGKEAGEFTVSVYNPDE
ENKEEKKD
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatcagtgcaagtgacacaaaagcagcagcagcagttgcagctgcgtcaacag
ctggaagagaagcagcactatgagagcagctattacctgagcagcaggtcatctgttagc
aagcaggccttctctactcacaagaccagcagccaccgcctgaaaagctctgtgaagaca
gagaagaggcaggaggcggtcaaactgagcccgttacccaaaagagccaaacgcacctac
ctggcgatggacaaggacaaagaagtaataggctacgtcattcctgtatttagagcaaac
catgacactgttcggggtctgatggaggctcaggaggaagatgtgacagaggaaggcatt
aactatgtggccatgaggaacttgtttgtcagggaggccagagaggcaatggatgtgaag
gttgagaagaaaaccagaacaaaacatgtcagagaatcagcagagcgtctggagtttggt
agaacgatggaggaatggactgagtttcgtaagaagatgcacccagataggctgacacac
cctcccgagtttatcgtcaagccccgtggacagactgtgtgggagggcaggacagtcaga
ctgcactgcaccgtggccggatggcccaaaccaaagattgcatggtacaaaaacaatgta
ctcatcgatgccaaggcccaccctgagaagtacacagcagaaagcagttacaacatgcac
tctctggagatcaagaattgtgatttcttggatactgctcagtattatgtctccgctctc
aatgtgaaaggggaggcttccactggagctactgttgttatcaaaaggttccaagatggt
acagaagagggaccatttgatcccaaaccacatggtttttgccttgagcacggtgttacc
tttaagacgagcattattgacaaatttgaagtggcttttggtcacgagggagaaacgctg
agtctgggctgcactgtcatcatttatcccactgtgaaaaagtatcagccagatgtcgtg
tggtacagaaactctgtgcctctgaagccttctaagtgggtgcacacccactggtctggg
gaacgtgccactctcactctcacccaccttaacaaggaagacgagggcatgtacaccctg
cgtgtcaacaccaaatccggctttgacacctactcagcctatgtgtttgtcagagatgct
gatgtagaggtggagggggctcctgtggcccccctggatgtacgctgtcatgatgccaac
aaggactatgtggtggtaacctggaagcagccagcagtggagggcagcagccccatcctt
ggatactatattgacaggtgtgaagtgggaacccatcactgggctcagtgtaacgatgac
ccagtcaagtatgcccgcttccctgtaacaggactagtggaggggcgcacttatgtcttt
agggtgcgcgcttttaacaaggcgggattcagtcgcccatcccgcgtctctgatcctgtt
gttgccatggatccttcagacagagctcgactcagagctggacctctggcaccttggact
ggggtgatcaagtttacggaagaggaacccactgtgggtgttattcctggagagcctact
gatgttgttgtcactgaggccaccaagagttatgtggtgcttgcctggaaacccccccag
caaagaggtcatgaaggagtcatgtattacattgaaaaatgtattcaagggacagacacc
tggcagagggtgaacactgggatgccagtgaagtctccacgctttgcaatctttgacctg
gcggagggtaaatcatacaacttccgtgtgcgatgctgcaactctgctggcgtgggcgag
ccctctgtacccactggagaaatcatagtcggtgacaaacttgatctcccctcagctcca
tgcagtcctgtggcaatcaggaacacagacacgtcagtggttgtcacctggggggcatct
aaagatgttaagcacttggttggctactatatagaatctagtgtggtgggcactgatgtg
tggatgccttgcaacaataaacctgtcaagcagaccaggtttgtgtgccatgggctcact
acagggtccaactacgtgttcagagtaaaggctgtgaatgctgctggatacagccagagc
tcctccatttctgatgccgtggttgtagtagctgctgtcgctgtacctgcaaagccaacg
aatgtgactctgctggaagctgtgaaagactacatggtactgggctggactgcaccctct
aacaacggaggagctgatatcagaggatactttgtagattacaggacagtaaagggagac
atatatggaaaatggcatgaaatgaatgaaaaggctctaactacaacttcctataaggcg
gagaacctgaaggaaaatgttttctaccagttccaagtccgtgcaatgaacatggcaggt
gtcagtaaaccatctttgcccagtgccagtttggagtgcaaggaatggaccatcactatt
ccaggccgcccagttggtctccatgtgctggaggttcgtgacacctccgttgtggtcttg
tgggaacctcctgcgtttaatggacgaagccctgtcaatggctattatttggacattaga
gaggcctctgcaggtgaggaaggctggaaggctgttcatgagaagaccaacaaggagaag
tacatgaaggtgaccgggctgatagcgggaacatcctacatcttccgtgtgcgtgctcag
aatattgttggagttggtagaccttctgcagaactgggtccagttctggctcagactcgt
cctggcaccaaggagatttatgtggatgttgatgacgatggtgtcatttctatgattttt
gagtgctctgagatgaaggaaggctctcactttgtttggtccaagaattaccaggagatc
acagacacatctcgtctgactattgtcaccgaaggcagcaaatccagagctatatttaac
agtctctctctggaggatctgggcaccttctcctgtatggtcaccaacaccgacggcatt
tcctccagctacactctcactgaggaggctcttcttcgtctcctggatcttagccatgaa
cacaagtttcctgttattcccttcaagaatgaaatggccatggagctgctggagaaaggt
cgagtgcggttctgggctgagatggaaaaattcacctctgcctgccaagtggagtatgtc
ttcaatgatgtcatcattgagcaaggaaagaaatacacgatgaactttgacaagtcgagc
ggccttatcgaactgttcatggactctttggaagttactgatgaaggaacatttaccttt
aacatggtggatggcaaggcaaaaggcactacaagtctagtgttaataggagatgaattc
agggagttacaaaggaaatctgagtttgagagggcagaatgggttaggaagcaaggacct
cattttgttgagtaccttggcttcactgtcactccagaatgtaatgtcctgttaaaatgc
aagattggaaacatcaaaccagagactgagatcatatggtccaaggactgcatcgagatt
gcagaggatgatgaggatgctgagaaaatcgagaaaaaagacagtgagctgacctttaat
attggaaagtgggttaataagcaggagcaaaagaaagaagggaaaaagccatctgcaaag
gacgttcccctgccgccaagaccaaaaatctccaagcaagacgcgggtatttatgaggtt
ttcctgagagacgagagaggaaaagataagagctccttcaacctaacagaagcaggatac
caaactgtaatgaatgagctgttcagagttattgccaattcttccaatgacatccaaatt
ctcagtactgaacatggcatcgtcctccactccaacgtcgtgtattatgatgagaatctt
cgtgttggatggcttcacaaagatgccaagattgcagcttcagagagagttaagtctggc
gtcacaggggagcagctttggcttaagatcaatgaacccactgaaaaggacaaaggcaaa
tacacgatggatatctttgatggcaaggacggcgtgaagagagtcttggatctgagtggc
aaggtatgggaggaagcatttgaagaattccaaaggctcaaagctgcagcaattgcagag
agaaaccgtgctcgtgttgttggaggcctgccagatgtggttgcaatccaagagggcaag
tccctgaacctgactggcaacgtgtggggtgagcccacgcctgaggtttcctgggtgaag
aacgacaaggagctggtgtctgacgaccgctacaaactaaagtttgagcacggaaagttc
gccagcatcacgatcgccgccgtcaccacggccgactcaggcaaatacgctctggttgtg
aagaacaagtatggcaaagaggccggcgagtttactgtcagcgtatacaaccctgatgag
gagaacaaagaggagaagaaagactaa
DBGET
integrated database retrieval system
