Cyprinodon variegatus (sheepshead minnow): 107098333
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Entry
107098333 CDS
T06110
Name
(RefSeq) tubby-related protein 4-like isoform X1
KO
K24720
tubby-related protein 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107098333
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Other domain-containing proteins
Tubby family proteins
107098333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
107098333
NCBI-ProteinID:
XP_015251447
Ensembl:
ENSCVAG00000006611
UniProt:
A0A3Q2CJ03
LinkDB
All DBs
Position
Unknown
AA seq
1806 aa
AA seq
DB search
MPRNYEQPGQSVGMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCRRRYYEEGWLA
TGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIF
VWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLE
SQITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPDFLVEDS
TESDTDSDDNILPLVRRVKPLLTVTFLSGDISLMNNYDDLSPAIIRSGLKDVEAQWCSQG
DLLAVAGMEKHGLPADTACAPIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSR
LFLACGPALYVVRVEHRVASLQLLCQQGIASALREEKDVGKLNMPSLLSSYVTSAFIPTI
KPPIPDPNNIRDFVSYPTSGNERLHCTMKRAEDSPEAGGPCYTLYLEYLGGLVPILKGRR
ISKLRPEFVIMDPKTDGKPEEVCVNPMISYTDSCNCSDSSDIDLSDEWVGKKSPKLSRGN
RLNMDSRKSPKLSRANQEGQRSPRLLTKKPPVRSPSLTRREFTMDGITEHNYLAQVTSNI
WGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISHDFMSLPVFNPNVF
SEDEDDLPVMGPSGVAGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNIQLDV
LTNPTATAAVAAASVPVTEHSQDAVASPYPVPNRYSNPSQGIFSGLEMSSLLPGTLPPPP
PPHHLPPQPHTQRSHSQQPRQPPSKQSHTMQTQQQQKMHHHQLQQQQHHHQSQSQQQLQQ
HQQQQQQQLHHPHTLHQQQQHHQHQAQQHQQMQQTQQRAANQLQQQQIQQQQQQMQLQHE
QMQQQQQQMQQQQQQIRQQIQEMRQQQQQLQQQHQQIQQQHQQMQRQHQQMQQQLKMQMS
LPPAPTGYPTISLQQIHLLPSIPTLTAEPVLDRVDYTHTLKPSLPRTLPPSFSDTDGSVE
IQMRKVNPPPPYPGTVVSAAASTAATTPQTFITNCDSPSVLAPDSCLKKEEFLLHPVTLQ
YPTPLGYERITTFDSSGNVEEVCRPRRRLIRNQNAYSVHGVGGSATLKVTSTENKKIQLP
YSSATLSRLSVPRYSIPSGDPPPYPDPANQVTATLPPPQRIDSSLIHATLRREGRDVGLK
VPQMMDSSRTLPTKAKMNTALSLSYQQRVPTALYTCTQCSSNSSSTSVSVSGGGTTSSGI
AGGTVVRQDFPPGKGAHHSTIIVHSKSASPLASQSSYSLLGAVDNNRDRTVYVNSAFTED
ETLNQQCQLEKSVRQLNLGDGSLTVKRPPPYQWDTTTTEDFWLTPEQTMIAQPSGNPKPP
PLIISQAQHLDVTRLPFVLTTKPPTSLNTSTLTFPSGYQISLSPFPPGVAHSGPSLQTLQ
NPPPQCSPNEVVTSVSFAQQDPSLVLPPGYPPNLANLACCPLPPLYPGASSCAGLQLHPV
SLHPWNPYPCPPPMQDPPPPPLPTKTHQILEKPLLSPPPPTAPPPPPPLPPPPPPTELLP
SKSSTEDQAESANNFPEPSSLNESPVPQESERFGKKSRKRLDSRAEEGNVPTVSEGRSRK
EGRALSDFNTLISSPRLSSREKKKPKGQREQLNKTKKMNRTTNEFQDSSESEPELFISGD
ELMNQNQSSKKSWKNKRSMRLASELEEIKCRKANEREDRSLGSQGFVYVMANKQPLWNEA
TQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALAN
VTQRLK
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggaactatgagcagcctggtcagtcagtagggatgttggccgccgtggaacat
ggtcccatcctgtgcagcgactccaacatcctctgcctctcgtggaagggccgggtcccc
aagagcgagaaggacaagccggtgtgccggagacgctactacgaggagggctggctcgcc
acggggaatgggcgaggagttgttggggtgacgtttacatcgagtcactgcaggagggat
aggagtacaccacagagaatcaattttaacttgcgaggacacaacagtgaggttgttttg
gtacgctggaatgaaccctttcagaagctggctacctgtgatatggaaggaggcattttt
gtctggatccagtatgaaggaagatggtctgtggagttagtaaatgacagaggagcccag
gtgagtgacttcacttggtcccatgatggcacccaagcgctcatcgcatacagggatgga
tttgtgttagtcggctcggtcagtgggcaaagacactggtcctcagagatcaacttggag
agtcaaattacctgcggtatctggaccccggatgatcagcaggttttgtttggaacagca
gatgggcaggtaatagtgatggactgccacgggcggatgctcgctcacgtgcttctacat
gagtctgacggcatcgtcagcatgtcgtggaactgccctgactttcttgttgaggacagc
acagagagcgacacagactctgatgacaatattctgcctttagtaagaagagtcaagcct
ttgctgacagtcaccttcttatcaggagatatcagtttgatgaacaactatgatgatctc
tctccagctattattcgttcaggactgaaagatgtagaagctcaatggtgctctcaggga
gacctcttggctgtggctggcatggagaaacacgggcttccagctgacacagcctgtgca
cccatcatgaggaatgcacttgttaagttctataatgtacaaggagaacacatatacact
ctagaaactcctgcacagagacccatcaccaccatctgctggggtcacagagactcccgc
ctgttccttgcatgtggtccagcactctacgtggtacgagtggagcacagagtggccagc
ctccagctcttgtgccaacagggcattgcgagcgccctgcgtgaggagaaggatgtcggg
aagctgaacatgccctcactccttagctcttatgttacctcggcttttataccaaccatc
aagcctccaattcctgaccccaacaacatccgtgactttgttagctacccaacgtccggg
aatgagcggctgcactgcaccatgaagcgagcagaagatagtcctgaggcaggtggcccc
tgctacacactgtatctggaatacttaggagggctggtgcctatactcaaaggaaggcgc
atcagtaagctcaggcctgagtttgtcattatggatcctaaaactgatggtaagccagag
gaagtgtgtgtgaaccccatgatctcctacacagacagctgtaactgctctgactccagt
gacattgacttgagtgacgagtgggtggggaagaagtcaccgaagttatctcgtggcaac
aggttaaatatggattcaagaaaatcccccaaactttcacgtgccaatcaggaaggccag
cggtcaccgcggctgctgactaaaaagcctcctgttcggtcgcccagtctgacccgccgg
gagtttacaatggatggaatcacagagcacaattatcttgcacaagtaacatctaacatt
tggggaacaaagttcaaaattgttggacttgcctccttcctcccagccaatcttggtgca
gtgatctataagactagtttgcttcatcttcagccaaggcaaatgacaatctaccttcct
gaagtgcgaaagatttctcatgacttcatgagtctgcctgtattcaaccctaatgtgttc
agtgaggatgaggatgacttacccgtgatggggccatctggagttgcaggagacaaccca
ccctgtaccgtcaatattccaatagctcccatccatagtcctgctcaagccatgtctcca
actcagagtattggtctggttcagtctctcctggccaatcagaatattcagcttgacgta
ttaaccaatccgacggccacagctgcagtggcagcagcctcagtccctgttacagagcat
agtcaagatgctgttgcttcaccataccctgtgccaaatagatactcaaatcctagccag
gggattttcagtgggttagagatgagttctcttctccctggcactttgcctcccccacca
ccacctcaccatctccccccacagcctcacacacagaggtctcactcacagcaacctcgc
cagccgccatccaaacagtcccatacaatgcaaacacagcagcagcagaaaatgcatcat
catcaactgcaacagcagcaacaccaccatcagtctcagtcacaacagcagctgcaacaa
catcaacagcagcagcagcagcagctgcaccacccccatactttacatcaacagcagcaa
catcatcaacatcaggctcaacaacaccaacaaatgcaacagacccaacaacgggcggca
aatcagcttcaacagcagcagatccagcagcagcagcagcagatgcagctacagcatgaa
cagatgcagcaacagcagcagcagatgcaacagcagcagcagcagatccggcaacagatt
caggagatgaggcaacagcagcagcagctgcagcagcagcatcagcagattcagcagcaa
catcagcaaatgcagagacaacaccaacaaatgcagcagcagctgaagatgcaaatgtca
ttgccaccagcccctactggctatccgaccatatccctgcaacagatccatcttcttcct
tcaatccctacgctcacagctgagcctgtgctagacagggtggactacacccacacgctg
aagccaagtcttccaaggactttacccccatccttcagtgacacagatggatcggtggaa
atccagatgaggaaggtaaatccccctccaccatacccagggacagtagtgtctgctgca
gcatcaacagcggctaccactcctcagacattcattacaaactgtgacagtccaagtgtc
ctggctcctgactcctgcctcaagaaagaggaatttttgcttcaccctgtcactctacaa
tacccaacacctctaggatatgaaaggatcacaacctttgatagcagtggcaatgtggag
gaagtgtgtcgcccacgtagacgcctcattcgtaaccagaatgcatactctgttcacggt
gttggaggttcagcgactctcaaagtgacctccactgagaataaaaaaattcagcttccg
tacagctcagcaacattaagtcgcttgtctgtccctcgatattctataccaagtggagat
cctcctccttatcctgatccagccaatcaggtaactgctactctcccacctcctcaaaga
attgacagcagtctaattcatgccactttacgccgtgagggcagggatgtgggactcaaa
gtgccacaaatgatggacagctctagaacgctgcccactaaggctaaaatgaatactgct
ttatcactttcctaccagcagagggtccccactgcactgtatacttgcacacagtgcagc
agtaacagcagtagtaccagtgtcagtgtaagtggagggggaactacaagtagcggcatt
gcaggtggcacggttgtcaggcaggatttcccaccaggcaaaggggctcatcacagcacc
attatagtgcactccaaaagtgcctcgccgctggcatctcagtcgtcttacagtctgctg
ggagctgtagataacaaccgggacaggactgtatacgtgaactctgcctttacagaagac
gagactttaaatcaacagtgtcaactggaaaaatctgttcgtcagttgaatttgggagat
ggcagtttgacggtcaaacgccctccaccttaccagtgggataccactaccacagaggac
ttctggctaactccagagcagacaatgatagcgcaaccatcaggaaatcctaaaccaccc
cctctcattatcagtcaagctcaacacttggatgtgactcggcttccttttgtcctcaca
acaaaacctccaactagtctgaacacaagcacccttaccttcccatcaggttaccagata
tccctctcccctttcccgccaggggtggctcatagtggaccctcactccagaccctacag
aaccctccgccacagtgctcccctaatgaggtcgtcacttcagtatcatttgctcaacag
gatccgagtttggtcctaccaccaggctatcccccaaacttggctaatttggcttgctgc
cctctccctccactgtaccctggagctagctcatgtgctggacttcagctccaccctgtc
agtctacatccttggaacccgtacccttgtccaccaccaatgcaagatcctccacctcct
ccgctgccaaccaaaactcatcagattttagaaaaaccactactctccccccctccacct
acagctccacctccaccacctccgctaccacctccccctcctcccactgagttactccca
tctaaaagttccacagaagatcaagcagagtctgcaaacaattttccagagccatcatct
ctgaatgaaagtccggtccctcaggaatccgagcgtttcggtaaaaaaagtcgcaaaaga
cttgacagcagagctgaggagggcaacgtacccacagtctctgagggaagatcgagaaaa
gaggggcgggcactctctgacttcaacactctcatatccagtccaaggctcagcagcaga
gagaagaagaagccaaagggacagcgagagcaactcaataagacgaaaaaaatgaacagg
acaacaaacgagttccaggacagctcagaaagtgaaccggagctgtttattagtggtgat
gagctcatgaaccagaaccagagtagtaaaaagagctggaagaacaagaggagcatgcgt
ttggcgagtgagctggaagagatcaaatgccgcaaggcaaacgagagagaggaccgtagt
ttaggcagccaagggtttgtctacgtcatggccaataagcagccactttggaatgaggct
acccaggtttatcagcttgactttgggggcagagtcactcaagagtcagcaaaaaatttt
cagattgagctggatggtagacaggtgatgcagtttgggcgaatagatgggaacgcttat
atcctggactttcagtaccctttctcagccgtacaggcttttgctgttgccttggccaac
gtgactcaaaggctcaaatga
DBGET
integrated database retrieval system
