Cyprinodon variegatus (sheepshead minnow): 107098346
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Entry
107098346 CDS
T06110
Symbol
limk1
Name
(RefSeq) LIM domain kinase 1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107098346 (limk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvg01001
]
107098346 (limk1)
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107098346 (limk1)
Protein kinases [BR:
cvg01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
107098346 (limk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
RIO1
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
107098346
NCBI-ProteinID:
XP_015251469
Ensembl:
ENSCVAG00000006022
UniProt:
A0A3Q2DVM6
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MSRRDQRFRRGIKGRCRDCDCILSRWYYEKEGDLYCKKHYWSRFGEHCHGCKENVSTGLV
MVAGEQKYHPECFTCMSCEMVIGDGDTYMLIERSRLYCGQCFCQGVVPAARSTSLTQRPH
MVALVFLPPTATGQRGLTISADYNLEKKLLVTVKDLDPAILSSDLLSSVQRGDQVLEVNG
IPARNISPDEIKRVIQDTSRPLQLIIEHNPQSPHDPLQPDHPPNNSRSPDSSVHDKLPSV
SNLPSLEEEPSTPEEPQEPLSPPQHQGNTWLRSRNVLRSYSIDKCPLSPGALSLLSQKRD
MVRSESLRVDPGERTHRIFRPSDLIHGEVLGKGCFGQAVKVTHQETGEVMVMKELIRFDE
ETQKTFLKEVKVMRCLDHPNVLKFIGLFYKDKRIHFISEYIQGGTLRETIAKMDEDFPWN
VRVGFAKDIAAGMAYLHSMNVIHRDLNSYNCLVRENQNVVVADFGLARLVMDKRNSSKTS
SLERSVKGPLSVKPDRRKRYTVVGNPYWMAPEMIHGKTYDERVDIFSFGIMTCEIIGRVS
ADPDYLPRTNNFGLNVEGFMQQYYPPMCPSAFLPLAVLCCDMDADKRPSFSKLEEWLDNL
LMNLDISLPLLSELEQISAAFWKNHSQQNQDETPATCEQNLLETLEENLRPELCSDKANS
HTEPNEFPQHHSQDSKADKDVNGEQHANGNGVRTSQDTNPPCCESVDSDSGKSESESHEE
CIIKGQTKSQHEPSAAGRSNRTRRTCRVLWERSTEDSSVL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgagaccaaaggtttcggagaggaattaaaggacggtgtcgtgattgtgac
tgcatcctgtcccgctggtactatgaaaaagagggagatctctactgtaagaagcactac
tggtctcgctttggagagcactgccacggctgcaaggagaatgtttcaacaggacttgtt
atggttgcaggagaacaaaagtaccatcctgagtgcttcacatgcatgagctgtgaaatg
gttatcggagatggagacacttatatgcttattgaacggtctagactttactgcggccag
tgtttttgtcagggtgttgttccagctgccagatcaacgtctcttacacagagaccccac
atggtggcgctagtgtttctccctcccactgcgactggacaacgaggcctaacaatttct
gctgattacaacctggaaaaaaagcttctcgtcactgttaaagatttagacccagctatc
ctcagctctgatctgctgtcatccgtccaaagaggagatcaagttttggaggttaatggc
atcccggcccgcaacatatccccagatgagataaagcgtgtgatccaagatacaagcaga
cccctccagctcatcattgaacacaatccacagtctcctcatgaccctctccaaccagat
catcccccaaataacagcagaagtcccgactctagtgtccacgacaaactcccttcagtt
agtaatctcccaagtctagaagaagagccgagtacaccggaggaaccacaagagccactc
tccccacctcagcatcaaggaaacacatggttacgaagcaggaatgttctgcgaagctac
agcatagataagtgtcccctgtctccaggagccttgtctttactttcccaaaagagagac
atggttcgctcagagtctcttcgggtggacccaggggaacggacacaccgtatcttcagg
ccatcagacctcatccatggagaggtgctaggcaagggctgcttcggtcaagctgtgaag
gtaacacatcaagaaacgggggaggtgatggtgatgaaagagctaatacgctttgatgaa
gagacccagaagacatttttaaaggaagtaaaggtgatgcgctgtcttgaccatcccaat
gttctcaagttcattggattgttttacaaagacaaacggatacattttatctccgaatat
atccaaggaggaactctcagagaaactatcgcgaaaatggatgaagattttccctggaat
gtaagagtgggatttgccaaagacatagcagcagggatggcatacctccactctatgaat
gtgatccacagagacctaaactcatacaactgtctggtcagagagaaccaaaatgtagtt
gtggcagattttggtcttgccaggctggtgatggataaaagaaatagcagcaaaacttcg
tctcttgaacgcagcgtaaaggggcctctgtcagtcaaacctgaccgcagaaaacggtat
acagtggtaggaaacccctactggatggcccctgagatgatccatgggaaaacctatgat
gaacgtgtggacatattctcctttgggataatgacctgtgagattattggcagagtgagc
gctgatcctgactaccttccccgaacaaacaactttggactcaatgtggagggtttcatg
cagcagtattaccctccaatgtgtccatctgccttcctgccattggctgtcctctgctgt
gacatggatgctgataaacgaccctcgttttcaaagctggaggagtggctggacaacctc
cttatgaacctggacatcagcctgcctttgctctctgagctggagcagatctctgccgcc
ttctggaagaatcacagtcagcaaaaccaagatgaaactcctgcaacctgtgaacaaaac
cttttagaaacacttgaagaaaatctgaggcctgaactttgttcggacaaagcaaacagc
cacacagagccaaatgagtttcctcaacatcactcccaagatagcaaagctgacaaagat
gtgaatggggagcagcatgcaaatggcaacggtgtgaggacatcacaagacacaaatccg
ccctgctgtgagtctgttgactcagactcagggaaaagtgagtctgagtctcatgaggaa
tgcatcattaaaggacaaacgaaatcccagcatgaaccctcagcggcggggcgctcaaac
aggactagaagaacgtgtcgtgtgctgtgggaacgatctacagaggacagctctgttctc
tga
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