Cyprinodon variegatus (sheepshead minnow): 107098390
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Entry
107098390 CDS
T06110
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107098390 (trim65)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107098390 (trim65)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-B_box
zf-RING_5
Prok-RING_4
zf-Nse
zf-RING_11
Baculo_IE-1
DUF1319
OmpH
Vps36-NZF-N
XhlA
Ribosomal_S2
Motif
Other DBs
NCBI-GeneID:
107098390
NCBI-ProteinID:
XP_015251546
Ensembl:
ENSCVAG00000010695
UniProt:
A0A3Q2CT79
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MESQNSNLTCAICLERFRYPVTIPCGHTFCKDCITTHWDTKSRSNIGPQCPICNDEFPSR
PVLKRNVSLSVLAEAANSTAASCREHPIRSGDGGRTMLLCDRHKKPLVYYCRQDKMPVCY
ECGIKECINHDRVLLEAERENQELLLERKSKEAEKRLEETQKNINDLTENISHAKVIVDQ
TSSWMKVKFSSLIKILAEKQEATERFIEEQKQEAIVEAETRLARLEERSKILTETRDQMA
ALGQLSDTDLIRESTRVEVPHFSDITTDVSPNLLDRLNGVTDVLTRVSKLVSEDLERAVC
TAVVQDGDGSPQDKRPVLAVVPSPAAPCLPGGKEGLSAYRCTLTFDPRTANEHLYLSHEN
RRAEHLTSGPRRVPAHEARFDHTWQVLCFQGFKNGQHYWELEVSKPWAYLGVTYETIPRK
EKGKRCMVGMNELSWSLQLDEHQLSAWHNGRRETLAGPSHHSRIGMLLDYEAGTLTYYGE
GQTRLHAFHCVFTQELFPACWIGEGVSITLCST
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcagaattcgaatctcacctgcgccatatgcctggagcgtttcagataccct
gtaaccatcccctgcggccacactttctgtaaagactgcatcaccactcactgggacact
aagagcaggtccaacatcggccctcagtgccccatctgcaacgatgagttcccctccaga
ccggttctgaagcggaacgtgtccctgtcggtgctggccgaggctgccaacagcacggct
gcatcctgcagggagcatccgattaggtcaggggatggagggaggaccatgctgctgtgc
gatcgccacaagaagccactggtttattactgcagacaggacaaaatgcctgtttgctac
gaatgtggcatcaaagaatgcatcaatcatgacagagtcctgttggaggctgagcgggaa
aaccaagagctgctgctggagagaaagagtaaggaggcggagaaacgccttgaagaaaca
caaaagaatataaatgacttgacggagaatatcagtcacgctaaggttattgtagatcag
acctcctcctggatgaaggtgaaattctccagtctgatcaagatcctggctgagaagcag
gaggccacggagcggttcatcgaggagcagaaacaggaagccatcgtggaggcggagacg
cggctggcccgcctcgaggagcgctccaagatcctgacagagacccgcgatcaaatggca
gctctgggccagctctccgatacagacctcatcagggaatcaacacgggtagaagtgcca
catttcagcgacatcaccacagacgtgtcgccaaatcttctggatcgattaaacggcgtc
acagacgttctgacccgagtttccaagctggtttctgaggacctggagagagccgtgtgc
accgctgtggttcaggacggcgacggttctcctcaggataagaggccggttctggctgtg
gttcccagtccggctgctccgtgcctcccaggagggaaggaaggcctcagcgcctatcgg
tgcactctgacctttgaccctcgaactgccaacgaacacctgtatctgtctcatgagaac
cgaagggcagagcacctgacctctgggccgcgccgtgtcccagctcacgaggcgcgcttt
gaccacacctggcaggtgctctgctttcagggctttaaaaacggacagcactactgggag
ctggaggtgtccaaaccgtgggcgtacctcggggtaacctatgagaccatccccaggaag
gagaagggcaagaggtgcatggtgggaatgaacgaactgtcatggagcctgcagctggac
gagcaccagctctcagcctggcacaacgggcggcgggagactctggccggcccctcccac
cacagccgcatcggcatgctgctggactacgaggcggggacgctcacctactacggcgaa
ggccagaccaggctccacgccttccactgtgtcttcacccaggagctgtttcctgcctgc
tggataggagagggcgtcagcatcaccctctgctccacgtga
DBGET
integrated database retrieval system
