Cyprinodon variegatus (sheepshead minnow): 107098432
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Entry
107098432 CDS
T06110
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107098432 (ddx10)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107098432 (ddx10)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
90S particles
Helicases
107098432 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
AAA_22
Motif
Other DBs
NCBI-GeneID:
107098432
NCBI-ProteinID:
XP_015251612
Ensembl:
ENSCVAG00000000109
UniProt:
A0A3Q2CCB3
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MKAGGSGKKKAGVPGAAAADPVRCFEKWKKKHTKTRALLKQQQKKKKKPQWQQEKEDIQR
LLSRYEDIRTEEVLKFSDLPLSRKTLLGLQEARYRQPTEIQRQTIGLALRGRDVLAAAKT
GSGKTLAFLVPVLESLYRQQWTPLDGLGALIISPTRELAYQTFEVLRRVGRNHEFSAGLV
IGGKDLKSESARICRTNIVICTPGRLLQHMDQTASFQASSLQVLVLDEADRILDMGFAET
LNAIVENLPATRQTLLFSATQTKSVKDLARLSLRDPEYVWVHEKARFSTPATLEQSYVVC
ELHHKVDMLYSFIRSHLRKKIIVFFACCKEVQYLYRAFCRLRPGTPVLALHGKQQQMKRV
EVYDSFVKKSSAVLLATDLAARGLDFPAVNWVVQFDCPEDANTYIHRVGRTARYQQGGEA
LLLLLPSEEAAMLAQLEEKKVPISRIQVNPDKLQSVQQKLEAFLAQEAELKERAQRCFVS
YLRSVYLMTNKDVFDVFKLKLQDYALSLGLAVAPRVRFLSKAREQRAQERLQNLQARPDG
EEEDESPGDRSEDDEDLRDLDLLTVKRRDVFSETGAPEEAGPPTQGPKQPAAKESRYREA
KKLLKRNFQINTKVTFNEEGEAVQLWPPAPQAAGQEEEQEEEEEQEGINVEKAKERLRRE
DQQFDKLEYRRKVQAKHRERRMKAKEARREASRRRRSDQEQEAGAQLASHSEDEFDFSAL
PDPDPSSEEEEEEEAQRKRRKTEQQEEEQTGLDTGLTLAEDEELVLHLLAGRH
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggaggcagcggtaagaagaaggcgggcgtaccgggagcagcggctgctgac
ccggttcggtgcttcgagaagtggaagaagaagcacacgaagacccgcgcgctgctgaag
cagcagcagaagaagaagaagaagccgcagtggcagcaggagaaggaggacatccagcgg
ctgctcagcaggtatgaagacatcagaaccgaggaggttctgaagttctccgacctcccg
ctgtccaggaagacgctcctgggtctgcaggaggcccggtaccgccagcccaccgagatc
cagaggcagaccatcggcctggctctgaggggcagagacgttctggctgcggccaagacc
ggttctggaaagaccctggccttcctggttccggtcctggagagcctgtaccggcagcag
tggacccctctggacgggctgggggctctgatcatctcccccaccagagagctggcctac
cagaccttcgaggttctccgcagggtgggtcggaaccacgagttctccgccgggctggtg
atcggggggaaggacctgaagagcgagtcggcccggatctgcagaaccaacatcgtgatc
tgcacgccgggccgcctgctgcagcacatggaccagacggccagcttccaggccagcagc
ctgcaggtgctggttctggacgaggcggaccggatcctggacatgggcttcgccgaaacc
cttaacgccatcgtggagaacctgcccgccacccgccagaccctgcttttctccgccacg
cagaccaagagcgtgaaggacctggcccggctcagcctccgggacccggagtacgtgtgg
gtccatgagaaggcccggttcagcaccccggccaccctggagcagagctacgtggtgtgt
gagctgcaccacaaggtggacatgctctactccttcatcaggagccacctgaggaagaag
atcatcgtgttcttcgcctgctgcaaggaggtgcagtacctgtaccgggccttctgccgc
ctgcggcccggcacgcccgtcctggcgctgcacggcaagcagcagcagatgaagagggtg
gaggtctacgacagcttcgtgaagaagagcagcgccgtgctgctcgccaccgacctcgcc
gccagaggcctggacttccccgccgtcaactgggtggtccagttcgactgtccggaggac
gccaacacctacatccacagagtgggccgcacggcccggtaccagcagggaggggaggct
ctgctcctgctgctgccctccgaggaggcggccatgctggcccagctggaggagaagaag
gttcccatcagccgcatccaggtgaacccagacaagctgcagagcgtgcagcagaagctg
gaggccttcctggcccaggaggcggagcttaaggagcgggcccagcgctgtttcgtctcc
tacctgcgctccgtctacctgatgaccaacaaagacgtctttgacgtcttcaagctgaag
ctccaggactacgctctgtccctgggactggccgtggcccccagggtccggttcctcagc
aaagcccgggagcagagggcccaagaacgtctgcagaaccttcaggcccggccggacggc
gaggaggaggacgaatccccaggagaccgcagcgaggatgacgaggatctgagggacctg
gatctgctgactgtcaagaggagggatgtgttcagtgagacaggggcccctgaggaggca
gggccccccacccaggggcccaagcagcccgcggccaaagagagccggtaccgggaggcc
aagaagctcctgaagagaaacttccagatcaacaccaaggtgaccttcaacgaggaagga
gaggcggtgcagctgtggcccccggcgccacaggcggcgggacaggaggaggagcaggag
gaggaggaggagcaggagggcatcaacgtggagaaggccaaggagaggctgagacgggag
gaccagcagttcgacaagctggaataccgacgcaaggtccaggccaaacaccgagagagg
aggatgaaggccaaggaggcgcgcagggaggccagcaggaggaggaggtccgaccaggag
caggaggccggagctcagctggccagtcacagcgaggacgagttcgacttcagcgccctg
cctgaccccgacccttcatcagaagaggaggaggaggaggaggcgcagaggaagaggagg
aagactgagcagcaggaggaagagcagacaggcctggataccggcctgaccctggctgag
gatgaggagctggtccttcatctgctggcgggacgccactag
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integrated database retrieval system
