Cyprinodon variegatus (sheepshead minnow): 107098438
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Entry
107098438 CDS
T06110
Symbol
szt2
Name
(RefSeq) LOW QUALITY PROTEIN: protein SZT2
KO
K23298
KICSTOR complex protein SZT2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107098438 (szt2)
Membrane trafficking [BR:
cvg04131
]
Autophagy
Other autophagy associated proteins
KICSTOR complex
107098438 (szt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4291
GtrA_DPMS_TM
Motif
Other DBs
NCBI-GeneID:
107098438
NCBI-ProteinID:
XP_015251622
LinkDB
All DBs
Position
Unknown
AA seq
3131 aa
AA seq
DB search
MAERQQEHEVEEADQIYLLMKEDYRISRNVRLAWFLSKLNQSIRPASPSELQTSENELDL
IAVHPKGWQPESPPTTDPCTLMPSTRATFLARRYRFIIELDLSPSTGIVDDSTGEMIFDE
VFHALSKCLAGLAQPFKVPGTDQLFRPKIFITILVYSSIIGLTSPQVLVQGCQLDKTNLK
EFVLQIYQQLRNLESNTAKVLHQQRQQMVEPGLGLSSSVEDQPPRNQGMSVVSADMGLVS
MVRQGILALQLLPPNSSAGIIIITDGVTSVPDVGVCETLLNQLRSGTITCSFVQVCRSXN
EXRVEGTPFVQMEATSGXNFSGCLVVLXAVDSLGSVLLXXGIIHVDLVSQDKLFNEHLVS
ASGNPALVMRRKKHTEKEVHAHLISAVSVRLREGYTVRDISLTKGGTQLEVKLALLWKHN
MHIEYLAAATWPLDPSNRSTKVEVTMEGSYDILHDISCTQRKPITSPYRTSVIRRFWNTL
QSINQTDQMLVHLQSFNSIPENYTIPESTKNGVPLFYIPPGSTTPVLSLQHGGSKDPSQS
QFASYWKPILSMDTNFWQRWFHMHRIAIILEHDLPVPKHLHTAGNNGRYSTIQCRISHSA
LTSLLRDCSSFVLVEGYSYVKLIYSQSDQVPSSFYLVRLISKTPCMVLRLGFPIGTPASI
RNKIVEELREQILKLRFPHRVQSKEATPKTKRKTGGHVSPSKAPLVQVTKPALSDRPCVV
LLNKPLEKLLIRYDKLPLDFRTPFIFSMENFPVPFNSTVPLSIAANRTASSTLASLSRYF
LHRRWVWAVQSSQGAAVTTQAIAHILSMLSEIRLSEGFHFAASGEGIVNMVVELPMKISG
DDPDQEGHSCIVQYILFPPHSPSSKDSFSTDDDNDTEVEAVDIDMELNLVTECWVEPQSG
SVLNCTDQHRHFQGLEYQDIPLAIFPRDLACMSTMMTFEYLNHLCLNKEQVCSLPSAQRV
EQAEVSTLEDSIQMVPFQFDLIHLLPNCQQVELFFLTFTADIENEDLGQQPPTLPNELLL
SLFHSSLEQELSDREVPLAAADHAAFTDHVVERERDGHAAPFSLSLVKERRDTADSSKEV
MGSTSTLQSFSNAELVDEEPLFRERASSVPQWRCYAKYISSQQLFLTFLPATFTDVLMLM
ASGAEPGGMVSTQEDDTLTPSNKSQEDSLSGSTSGPDRSESTLTYLVSKLCRSSSCGNIS
ARSSLITSPSESHTEPEDLSPVYADSRQSEVEAGTPGSEPGGKEAVQFSEPKKEKLTFGF
SRQVSQQSTSSSGQLRCPLYVYNCSLENLKEQLVHPNSRCQPKDIFLRHRAVSVLPDEAE
SGQIMSCLENPEHLQMVDLTELSVTLDVFVLTLPLEIELMADYHHNRYTSESSVSLSRSP
GLPSSYRSDDEQMAALDGLRGSGTERVSGDPLSKFPLAHRLAVLSTLDEIRWLLEDEIVS
ALRHSRVIASATLNKVAEHVFQSNGRPHCHCEEVPLQFVFGPEQSLEKFKEAAFHLHADP
FKEPSTAATSEAGETAGAKKLDSADVASSSPPQPESTSPPKTASSVSLAESSHSCSRTRP
SRVQSVVSSQGSLDSDMQGYDGGSSDSECESPTSDEQEARSPSMPDFWLIVRIHLDRVKV
YSHARSMSEGKQLCAEELGGKEEEQELPEFLELHQTMVRRIGEVCRVVNQRMLLQDLHDS
HICHTLLVAESEEDIWKNDSLFRQRQNTSDDYGTEESYQARDYLAATMHFIPGHFACDVV
WSTVIHIHPRLKMGPNMGVSRGPEITDELVKLLRKRLDETTLDIITVMLVRNCKLTPADV
EFIQPSGSPATGIMTFVLPQYCLSWLSTIAHYLRQNLLIFLHVPKYTDSNTAHHFKHYFP
LSGDSADSDIYLYNKPGGQGTGGKGIACIALSFVDAEGQALQAAAQSSPPTPRSEPCPIP
FHPEHFEELTTVMKAENISSRSAQLYVRFDIWEQGNISPLQLSDKLQGALRHALCDAIME
LRVLPNPLCVGVQREETKGASLAEVKESRDSPRQRSGSRAFKVCPSPISLTQPAGSNPLT
GTGTSESTTPTGKSTRRSFWDILSKPDSAELGIPKTTDDIIQEKGEEGRAARRRHKTENV
KQQWSQERAAELEQAQRRQLQEGDTGTLHPVYQDCCQAWISFMAKLGCPSIQQCTAGIAS
NFLLPSILTEISNLVSSLAADTTVKSFERTSSPSGDVFVPVLLVQQLSHPPDAKRSFILI
GRNFHQWHCCTEPDDSSDEESCAGLNRFTPLKGFQRFEAPEQSDSLSPSQAEAGQAPRQR
FLFISIQDKRVTLFSYNWSVDLGAALNRDLVRLVKWQNARAHVVHCLFNQKMGLFHHFCF
SDAPLHELDSKLDPNPFLGPSMEPDALLRSAVAPSPSKEQGRLGGSGRSLAPLHFPSELL
PFDEALRDVCTIRPLMEGDAVLRHGNQLLEIKAAERREMEKQMKIENLFVTWQQRSAQSN
MPISGTDLDTLKQSSRLVHYCATPLLFDPGFRKQIQEEPGFEPVVKKRHRSSDSTASGRD
RSCSTDSADMLPSRLKEEPWLLEISNTFLQQYVQYLQSMGFILVQVRPPSPARSVARARA
ALLSSMSLEGRMSFSYVKQKSEDNPKASAAGTASYHLQRALPGGIVLMELAFQGSYFCVK
QYALECSRIPMGQTVNSQGTLLTKPRCKPFPDAAPVCDCALSMLFTEECDKVRDLMHVHS
FSYDFHLRVAHQYLVGCHMTLRQGYQLTDFLDDFICHYPDIPKFGRNHVFQGSFSVSTAM
ITAHQLYNYIIDHASTYNMKPLRMSKAAAAADSRKGMADLHEYALVALWNSSGSYKDLEG
LHHHDDFDVSLVVCHNAAPFEEQSDGERHLLRLRFYVIMTSQRELFPHLTADMRRFKKLP
QIYRDPNEQGGRPPRERAESSSSNGEGQDLWEERTSEGAAISAPSDGNEFYPLTGGRPGT
QGLLYGSPLFPLLNNEVASARKQIQASVEQAMGHCRRDNLWRRLFHGDHVALDKLKLARL
SFTELEELLQAVQSHSVGDIDPQLDYFLNMSPMWYQSLIKVLLTRFPQSCRHFDDNGVQY
LAVLNQKFTDCFVLVFLDIQAGKTSLKVVFREPLPSQPQASSSPPPQLVSMYHHLESVIN
TACYNLWTGLL
NT seq
9396 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagacaacaggagcacgaggtggaggaggccgaccagatctacctgctcatg
aaggaggactaccgcatctccaggaatgtgcgtctggcctggttcctcagcaagctgaat
caaagcatcaggccggcctccccgtctgaactgcaaacctctgagaatgagctggacctg
atagctgtccatcccaagggatggcagccagaatccccccccaccacagacccctgcacg
ttgatgccgtccacccgggcaacctttctggcccgccggtaccgcttcatcatagagctg
gacctcagcccttccacagggattgtggatgacagcacaggagagatgatctttgatgaa
gtctttcacgcattgtccaagtgcctggctgggctggctcaacccttcaaagttcctgga
acagatcagcttttcaggcccaagatctttatcaccattctggtttattcctcaattatt
ggtctcacttcaccccaggttctggtgcagggctgtcagctcgataaaaccaatctgaag
gagtttgttcttcagatctaccaacagctcagaaatctggagagcaacacggcaaaggtt
ctgcatcagcaacggcaacagatggtggaaccaggactgggactgagcagcagcgtggag
gaccaaccccccaggaatcaggggatgtcggtggtgtctgccgatatggggctggtcagc
atggttcgccaagggatcctggccctccagctgctgcctcctaactccagtgcaggcatc
atcatcatcactgacggtgtgaccagcgttcctgatgtgggcgtgtgcgaaacgctgctg
aaccagctgaggagtggaaccatcacatgttcctttgtgcaggtatgcagaagctgaaat
gaataacgtgtggagggaactccttttgttcagatggaggcaacttctggctagaacttc
tcaggatgtttagtcgtcctttaagctgtggactctttagggtcggtcttattgtaatga
ggcatcattcatgtcgatttagtttcccaagacaaactcttcaatgagcacctggtgtcg
gccagcggtaaccccgccctggtgatgaggagaaagaagcacacagagaaagaggtccac
gctcatctgatcagtgcggtgtccgtgaggctgagggaaggctacaccgtcagagacatc
agcctcaccaaaggtggaacccagctggaggtgaagctggctttgctgtggaaacacaac
atgcatatagagtacctagcagccgccacctggccattggacccatccaacaggagcact
aaggtggaggtaaccatggaaggcagctacgacatcctgcacgatatcagctgcacgcag
cggaagcccatcaccagcccgtaccgcacctctgtcatccgccgcttctggaacacgctt
cagagcatcaaccaaactgaccagatgttggtgcatctgcagtccttcaattccatcccg
gagaattacaccattccagagagcaccaaaaatggagtccctctgttctacatccctcct
ggctccaccaccccggttctgtctttgcagcacggtggatccaaagacccgtctcagtcc
cagtttgcatcctactggaaacccatcctctctatggacaccaacttctggcagagatgg
tttcacatgcaccgcatcgctatcatccttgaacatgacttgcctgtccctaaacatctg
cacacagctggtaacaacggccgctacagcaccatccagtgccggatctcccactctgcc
ctcacatccctgttgagggactgcagcagctttgtgttggtagaaggttactcttacgtg
aagctcatttacagtcagtcggatcaggtcccctcgtcgttttacctggtacgcctgatc
tccaagactccctgcatggttctgcgtctgggcttccctattgggacaccggcgagcatt
cgaaacaagattgtagaagagctgcgggagcagatcctaaagcttcgcttccctcaccgt
gttcagagcaaggaagcaactccaaagaccaagaggaagacggggggacatgtgtctcca
tctaaagcccccttggttcaagtgaccaagcctgccctgtctgacagaccttgtgtggtg
ctcctcaataagcctctggagaagttgcttataaggtatgacaagctgccgctggacttc
aggactcccttcatcttcagcatggagaatttcccggtgccttttaacagcactgtgcct
cttagcatagcagccaaccggacagcctcctccaccctggcctcgctgtcgcgctacttc
ctccacaggcgctgggtgtgggccgtgcagagcagccagggggcagcggtgaccacgcag
gccatcgctcacatcctttccatgctctcagagattcgtctgtcagaaggttttcacttt
gctgccagtggggagggcattgttaacatggtggttgagctgcctatgaagatctcagga
gacgacccagaccaggaaggacactcctgcatcgttcagtacattttgtttcctcctcac
tccccctccagtaaggacagcttctctaccgacgacgacaacgacacggaggtggaagct
gtggacatagacatggagctgaacctggtaacggaatgctgggtggaacctcagagtggc
tcagtgctgaactgcacggaccagcaccgacacttccagggccttgaataccaggacatt
ccactagcgattttccccagggacctggcctgcatgtccaccatgatgacctttgagtat
ttgaaccatctttgccttaacaaggagcaggtctgctcactaccttctgcacaaagggtg
gagcaagcagaagtctcaacgctggaggatagcatccagatggttcccttccagtttgat
ctcatacatcttcttccaaactgccagcaggttgaactcttcttcctaacattcactgca
gatatagaaaatgaagatctgggtcaacagccccccacccttcccaatgagctactgctc
agcctcttccacagcagcctggagcaggagcttagtgacagagaggtgccgctggctgca
gctgaccacgctgccttcaccgaccatgttgtggagcgtgaacgagacggacacgccgct
cctttttcgctgtcgctggttaaagagcgaagagacacagccgacagtagcaaggaggtg
atgggatctacaagcaccttacagagcttcagcaatgcagagcttgttgatgaggagcct
ctgttcagagagagggcttcctctgtcccacagtggaggtgctacgccaagtacatcagc
tcccagcagcttttcctcaccttcctgcctgctaccttcacagatgtcctgatgcttatg
gcatcaggagctgagcctggaggtatggtcagcacacaagaggacgatactctgactccc
agcaacaagtctcaagaagactctctgtcaggttccaccagtggacccgacaggtcagag
tccaccctgacctacctggtctctaagctgtgcaggagctctagctgtgggaacatctcg
gccaggtcctccctcattacatccccatctgagagtcacactgagcctgaggacttgtcg
cctgtttacgcggacagcaggcagtcagaggtggaggctgggacaccgggctcagaacct
gggggaaaagaagcggtccaattttccgaaccaaagaaagaaaagttgacctttggtttc
agcaggcaggtgtcccagcagagcacctccagcagcggccagttgaggtgtccactttat
gtgtacaactgctcactggagaacctaaaggagcaactggtgcaccccaactcccgctgc
cagcccaaggacatcttcctcagacaccgtgccgtctctgtgctccctgatgaggcagag
tccgggcagatcatgtcctgcttggagaacccagagcacctccagatggtggacctgacg
gagctctcagtgaccctggacgtgttcgttttgacccttcccctggagatagagctcatg
gccgattaccaccacaacaggtacacctcagagagcagcgtctccctgagccgatctccg
ggcctgccctcctcttaccgctctgatgacgagcagatggcggcgctggacggcctcaga
gggtctgggacagagagagtctctggggatcccttgtctaagttcccacttgcccacaga
ctggcggttctgtccacgctggatgagatccgctggctgctggaagacgaaatcgtttcc
gctctgcgtcactcccgggtcatcgcctcggcaaccctgaacaaagtggccgagcatgtg
ttccagtccaacggacggccgcactgccactgtgaggaggttcccctgcagtttgtcttt
gggccggaacagtcactggaaaagttcaaagaggctgccttccatcttcatgcagatcct
ttcaaggagccttctactgctgctacatcagaggctggagaaacggctggagccaagaag
ctggactcggcagacgtggcgagctcgagccccccccagcccgagtccacttctccccca
aagacggcctccagcgttagcctggccgagtcctctcacagctgcagcagaaccaggccc
agtcgtgtccagagcgtcgtgtccagccagggaagtctggactcagacatgcagggctac
gatggcggcagcagcgactcagagtgtgagagtccaacctctgacgagcaggaggcccgc
tccccttcaatgccagacttctggctcatcgtcaggatccatctggaccgagtgaaggtc
tattcccatgccaggtcgatgagcgaaggcaaacagctgtgtgctgaggagctaggcggg
aaagaggaggagcaggagctgccggagttcctggagctgcatcagaccatggtcaggagg
atcggcgaagtgtgccgcgtcgtcaaccagcgcatgctgctccaagacctgcatgacagc
catatctgtcacacgctgctggtggctgagagcgaggaggacatctggaagaatgactcc
ctcttcaggcagaggcagaacacctctgatgactatggtacagaggagagctaccaggcc
agagactacctggctgccaccatgcacttcatccctggacactttgcctgtgacgtggtg
tggagcacagtcatccacatccatccacgactgaagatgggacccaacatgggggtgtcc
agaggtccagagatcacagatgagctggtcaagttgcttcggaagcgtctggatgaaacc
accttggacataatcacagtcatgctggttaggaactgtaagctgactcctgctgatgtg
gagtttatccagccctcaggatcgcctgccactgggataatgaccttcgtcctgccacag
tactgcctctcctggctgtctaccatagcccactacctcaggcagaacctcctgatcttc
ctgcatgtaccaaagtatactgacagcaacacagcacatcacttcaagcattactttcct
ctgagtggcgactcggctgactctgatatatacctctacaacaagcctggaggccagggc
acaggaggaaagggtattgcctgcattgccttgtcctttgtggatgctgaagggcaagcc
ctccaggctgcagctcagagcagcccccccacacccagaagtgagccctgccccattcct
ttccaccctgaacattttgaggagctgacaaccgtgatgaaagcagaaaacatcagctcc
agatcagcccagctttatgtgcgctttgacatttgggagcaagggaacatcagcccctta
cagctgagcgataaactgcagggggcgctgcgccatgcgctctgtgacgccatcatggag
cttagggtccttcccaatcctctctgtgttggtgtccagagagaagaaactaaaggagcc
tctctggcggaggtgaaagaaagcagagacagccccaggcagcgcagcggctcacgggcc
tttaaggtctgcccctctcccatcagcctgacccagcctgccggcagcaacccgctgacc
ggtaccggcacctcagagtccaccacgcccaccggtaaaagcacccgccgcagcttctgg
gacatactgagcaaacccgactcggcagaacttggcatccccaagaccacggatgacatc
atccaagagaaaggggaggaggggcgggcggcgcggcgcagacacaagacggagaacgtg
aagcagcagtggagtcaggagagggcggcggagctggagcaggctcagaggaggcagctg
caggagggcgacaccggcaccctacaccccgtctaccaggactgctgccaggcatggatc
agcttcatggccaaacttggctgcccctccatccagcagtgcacggccggcattgcctcc
aacttcctgctgccctccatcctgacggagatctccaacctggtcagctctctggccgct
gacaccacggtgaaatcctttgagaggaccagctctccctctggagatgtgttcgtcccc
gtcctcctggtccagcagctcagccaccctccagacgccaaacgcagcttcattctcatt
ggacgaaacttccaccagtggcactgctgcacagagccagacgacagttcagatgaggaa
agctgcgcagggctaaataggttcacacctctgaaaggcttccagcgcttcgaggccccg
gagcagagcgactccctcagtcctagccaggccgaggcaggacaggcccccaggcagagg
ttcctgttcatcagcatccaggacaaaagggtgactctgttcagctataactggtccgtg
gatctaggcgccgccctgaaccgcgacttggtgcgtctggtgaagtggcagaacgccagg
gctcacgttgtccactgcctgttcaaccagaagatgggcctcttccatcacttctgcttc
tccgacgcaccgctgcatgaactggactccaagctggatccaaacccgttcctgggcccc
tccatggagcccgacgccctgctgcggagcgccgtggccccatcccccagcaaggagcag
gggaggctgggcggttctggccgcagtctggctccgctccatttcccctcagagctgctg
cccttcgacgaggctctgagggacgtctgcaccatcaggcccctgatggaaggagacgct
gtgcttcgacacgggaaccagcttctggagatcaaggctgccgagcgcagagagatggag
aagcagatgaagatagaaaacctgtttgtgacgtggcagcagaggtcggcccaatctaac
atgcccatatctgggaccgacctggacactctgaagcagtcctccaggctggtccactac
tgcgccaccccgcttctgtttgacccgggcttcaggaagcagatccaggaggaaccgggc
tttgagcccgtggtgaagaaacgccatcgttccagcgactccactgcgtcgggccgagat
cggagctgcagcacggattcggccgacatgcttcccagccggctgaaggaggagccgtgg
ctgctggagatctccaacaccttccttcagcagtacgtccagtacctgcagagcatgggc
ttcatcctggtccaagtccggcctccatctcctgctcgcagcgttgccagggcgcgcgcc
gcactgctcagctccatgtcgctggagggaaggatgtctttctcctacgtgaagcagaag
agtgaggacaaccctaaggcgtcagcggctggcaccgcctcctatcacctccagagggcg
ctgccaggagggatcgtgctgatggagctggcctttcagggatcctacttctgtgtcaag
cagtacgcgctggagtgttcccgcatccccatgggtcagacggtcaactcccagggcacc
ctcctcaccaaacctcgttgcaagccgtttccagacgccgccccagtgtgtgactgtgcg
ctgtccatgctcttcactgaggagtgcgataaggttcgggacctgatgcacgtccactcc
ttcagctacgacttccacctgcgggtcgctcaccagtacttggtcgggtgccacatgacg
cttcgacagggctaccagctcacagacttcctggatgacttcatctgccattacccggat
attcccaagtttggccgcaatcacgtctttcaaggaagcttctcggtctccacggcgatg
ataacagcccaccagctctacaactacatcatcgaccacgccagcacgtacaacatgaag
cctctccgcatgtccaaggccgcagccgctgctgacagcagaaaggggatggcagacctg
catgagtacgcgctggtggctctgtggaacagttctggctcctacaaagacctggagggc
ctccaccaccacgacgactttgacgtgtctctggtggtctgccataatgctgctcctttc
gaggagcagtctgatggggagaggcatttgctgaggctacggttctacgtcatcatgacc
agtcagagggagctgttcccccatctcaccgcagacatgcggcgcttcaagaagctgcca
cagatctaccgggatcccaacgagcagggcggtcgccccccccgggaacgagcagagagc
agcagctcaaatggagaaggccaagacctctgggaggagaggacctctgaaggtgctgcc
atctcggctcccagcgacggcaacgagttttatcctctgacaggaggacggccagggacc
caggggctgctgtacggctcccctctgttccctctgctcaataacgaggtggcttcagcc
cgcaaacagatccaggccagcgtggagcaggccatgggtcactgccgccgagacaacctg
tggaggaggctgttccatggagaccatgtggccctggacaagctgaagctggccaggctg
tccttcacagagctggaggagctgctgcaggcggttcagagtcactcagtgggggacatc
gacccccagctggattatttcctcaacatgagtccaatgtggtaccagagcctgatcaaa
gtcctgttgacccgattccctcagagctgcagacactttgatgataacggcgtccagtat
ctggcggttctgaaccagaagttcacagactgctttgtgttggtcttcctggacatccaa
gcaggaaaaactagcctgaaggttgttttccgagagccgctgccgtctcagcctcaggcc
agcagcagtcctcctcctcagctggtgtccatgtaccaccacctggagtccgtcatcaac
acggcctgctacaacctgtggactggactgctgtag
DBGET
integrated database retrieval system
